RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 H3BRN7 92 aa2.08□□□□□ -2.08
CSMD3-210ENST00000534172 PRB2P02812 416 aaPredicted RBP2.08□□□□□ -2.08
CSMD3-210ENST00000534172 LINC01558Q9Y6Z2 57 aa2.08□□□□□ -2.08
CSMD3-210ENST00000534172 USF3Q68DE3 2245 aa2.07□□□□□ -2.08
CSMD3-210ENST00000534172 IGKV2-28A0A075B6P5 120 aa2.07□□□□□ -2.08
CSMD3-210ENST00000534172 IGHV3-64A0A075B6Q5 118 aa2.07□□□□□ -2.08
CSMD3-210ENST00000534172 IGKV2D-28P01615 120 aa2.07□□□□□ -2.08
CSMD3-210ENST00000534172 IGHV3-53P01767 116 aa2.07□□□□□ -2.08
CSMD3-210ENST00000534172 POLR2KP53803 58 aaKnown RBP2.07□□□□□ -2.08
CSMD3-210ENST00000534172 CLPSP04118 112 aa2.07□□□□□ -2.08
CSMD3-210ENST00000534172 RPL39LQ96EH5 51 aaKnown RBP2.07□□□□□ -2.08
CSMD3-210ENST00000534172 PLAC8Q9NZF1 115 aa2.07□□□□□ -2.08
CSMD3-210ENST00000534172 LENEPQ9Y5L5 61 aa2.07□□□□□ -2.08
CSMD3-210ENST00000534172 Q8NAQ8 132 aa2.06□□□□□ -2.08
CSMD3-210ENST00000534172 SMIM11BQ8TCY0 68 aa2.06□□□□□ -2.08
CSMD3-210ENST00000534172 COX7B2Q8TF08 81 aa2.06□□□□□ -2.08
CSMD3-210ENST00000534172 COX14Q96I36 57 aa2.06□□□□□ -2.08
CSMD3-210ENST00000534172 WNK1Q9H4A3 2382 aa2.06□□□□□ -2.08
CSMD3-210ENST00000534172 IGHV3OR16-8A0A075B7F1 116 aa2.06□□□□□ -2.08
CSMD3-210ENST00000534172 NDUFA4O00483 81 aa2.06□□□□□ -2.08
CSMD3-210ENST00000534172 MSMBP08118 114 aa2.06□□□□□ -2.08
CSMD3-210ENST00000534172 CNBPP62633 177 aaKnown RBP2.06□□□□□ -2.08
CSMD3-210ENST00000534172 RPL39P62891 51 aaKnown RBP2.06□□□□□ -2.08
CSMD3-210ENST00000534172 Q8NDZ9 215 aa2.06□□□□□ -2.08
CSMD3-210ENST00000534172 DNAJC13O75165 2243 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 PRR14LQ5THK1 2151 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 ZNF469Q96JG9 3925 aaPredicted RBP2.05□□□□□ -2.08
CSMD3-210ENST00000534172 H3BPC8 53 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 IGKV4-1P06312 121 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 MGPP08493 103 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 DEFB113Q30KQ7 82 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 WFDC10AQ9H1F0 79 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 IGKV2-40A0A087WW87 121 aaPredicted RBP2.05□□□□□ -2.08
CSMD3-210ENST00000534172 ETDCA0A1B0GVM5 59 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 A0A1W2PNM2 257 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 H0YGG7 62 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 IGKV2D-40P01614 121 aaPredicted RBP2.05□□□□□ -2.08
CSMD3-210ENST00000534172 SPAG11BQ08648 103 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 RPL39P5Q59GN2 51 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 SPAG11AQ6PDA7 123 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 Q6ZTI0 123 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 TMEM167AQ8TBQ9 72 aa2.05□□□□□ -2.08
CSMD3-210ENST00000534172 DOCK10Q96BY6 2186 aa2.04□□□□□ -2.08
CSMD3-210ENST00000534172 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.04□□□□□ -2.08
CSMD3-210ENST00000534172 CSAG1Q6PB30 78 aa2.04□□□□□ -2.08
CSMD3-210ENST00000534172 MINOS1-NBL1R4GNA1 71 aa2.04□□□□□ -2.08
CSMD3-210ENST00000534172 TRRAPQ9Y4A5 3859 aa2.04□□□□□ -2.08
CSMD3-210ENST00000534172 TRGV2A0A075B6R0 118 aa2.03□□□□□ -2.08
CSMD3-210ENST00000534172 H0Y9P7 68 aa2.03□□□□□ -2.08
CSMD3-210ENST00000534172 WT1-ASQ06250 92 aa2.03□□□□□ -2.08
CSMD3-210ENST00000534172 MIR22HGQ0VDD5 57 aa2.03□□□□□ -2.08
CSMD3-210ENST00000534172 KPRPQ5T749 579 aaPredicted RBP2.03□□□□□ -2.08
CSMD3-210ENST00000534172 Q8TAT8 98 aa2.03□□□□□ -2.08
CSMD3-210ENST00000534172 GAFA1Q96PS6 74 aa2.03□□□□□ -2.08
CSMD3-210ENST00000534172 DIDO1Q9BTC0 2240 aaKnown RBP2.03□□□□□ -2.08
CSMD3-210ENST00000534172 ABCA13Q86UQ4 5058 aa2.03□□□□□ -2.08
CSMD3-210ENST00000534172 CLPSL1A2RUU4 121 aa2.03□□□□□ -2.08
CSMD3-210ENST00000534172 DEFB108AA8MXU0 73 aa2.03□□□□□ -2.08
CSMD3-210ENST00000534172 KRTAP25-1Q3LHN0 102 aa2.03□□□□□ -2.08
CSMD3-210ENST00000534172 TTTY12Q9BZ98 90 aa2.03□□□□□ -2.08
CSMD3-210ENST00000534172 VPS13CQ709C8 3753 aa2.03□□□□□ -2.08
CSMD3-210ENST00000534172 ANK3Q12955 4377 aaKnown RBP2.03□□□□□ -2.08
CSMD3-210ENST00000534172 SACSQ9NZJ4 4579 aa2.03□□□□□ -2.09
CSMD3-210ENST00000534172 DEFB119Q8N690 84 aa2.02□□□□□ -2.09
CSMD3-210ENST00000534172 KCNQ1DNQ9H478 68 aa2.02□□□□□ -2.09
CSMD3-210ENST00000534172 HIVEP2P31629 2446 aa2.02□□□□□ -2.09
CSMD3-210ENST00000534172 A0A087WSZ3 146 aa2.02□□□□□ -2.09
CSMD3-210ENST00000534172 A0A1B0GU33 70 aa2.02□□□□□ -2.09
CSMD3-210ENST00000534172 SPINK7P58062 85 aa2.02□□□□□ -2.09
CSMD3-210ENST00000534172 COA5Q86WW8 74 aa2.02□□□□□ -2.09
CSMD3-210ENST00000534172 LEAP2Q969E1 77 aa2.02□□□□□ -2.09
CSMD3-210ENST00000534172 FAM215AQ9Y5M1 114 aa2.02□□□□□ -2.09
CSMD3-210ENST00000534172 TNCP24821 2201 aa2.02□□□□□ -2.09
CSMD3-210ENST00000534172 TENM2Q9NT68 2774 aa2.02□□□□□ -2.09
CSMD3-210ENST00000534172 ZNF407Q9C0G0 2248 aa2.02□□□□□ -2.09
CSMD3-210ENST00000534172 PKDREJQ9NTG1 2253 aa2.02□□□□□ -2.09
CSMD3-210ENST00000534172 IGKV1-17P01599 117 aa2.01□□□□□ -2.09
CSMD3-210ENST00000534172 LINC00315P59091 139 aa2.01□□□□□ -2.09
CSMD3-210ENST00000534172 U3KQA8 63 aa2.01□□□□□ -2.09
CSMD3-210ENST00000534172 TRBV6-4A0A1B0GX49 114 aa2□□□□□ -2.09
CSMD3-210ENST00000534172 COX7BP24311 80 aa2□□□□□ -2.09
CSMD3-210ENST00000534172 DEFB112Q30KQ8 113 aa2□□□□□ -2.09
CSMD3-210ENST00000534172 DEFB109BQ30KR1 87 aa2□□□□□ -2.09
CSMD3-210ENST00000534172 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2□□□□□ -2.09
CSMD3-210ENST00000534172 TACC2O95359 2948 aa2□□□□□ -2.09
CSMD3-210ENST00000534172 IGKV3D-11A0A0A0MRZ8 115 aa2□□□□□ -2.09
CSMD3-210ENST00000534172 TRGV4A0A0C4DH28 118 aa2□□□□□ -2.09
CSMD3-210ENST00000534172 I3L2K1 104 aa2□□□□□ -2.09
CSMD3-210ENST00000534172 CDKN2A-AS1Q9UH64 79 aa2□□□□□ -2.09
CSMD3-210ENST00000534172 SPINT4Q6UDR6 99 aa1.99□□□□□ -2.09
CSMD3-210ENST00000534172 CADP27708 2225 aa1.99□□□□□ -2.09
CSMD3-210ENST00000534172 IGLV10-54A0A075B6I4 117 aa1.99□□□□□ -2.09
CSMD3-210ENST00000534172 M0QY20 66 aa1.99□□□□□ -2.09
CSMD3-210ENST00000534172 SPATA8Q6RVD6 105 aa1.99□□□□□ -2.09
CSMD3-210ENST00000534172 SONP18583 2426 aaKnown RBP1.99□□□□□ -2.09
CSMD3-210ENST00000534172 TENM3Q9P273 2699 aa1.99□□□□□ -2.09
CSMD3-210ENST00000534172 ABCA4P78363 2273 aa1.99□□□□□ -2.09
CSMD3-210ENST00000534172 MALRD1Q5VYJ5 2156 aa1.98□□□□□ -2.09
CSMD3-210ENST00000534172 M0R2N4 97 aa1.98□□□□□ -2.09
CSMD3-210ENST00000534172 LINC00158P58513 81 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms