RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 RPL37P61927 97 aaKnown RBP9.87□□□□□ -0.83
HIF3A-216ENST00000533789 MT1HP80294 61 aa9.87□□□□□ -0.83
HIF3A-216ENST00000533789 Q6JHZ5 121 aa9.85□□□□□ -0.83
HIF3A-216ENST00000533789 CLEC2BQ92478 149 aa9.84□□□□□ -0.83
HIF3A-216ENST00000533789 IGFL1Q6UW32 110 aa9.82□□□□□ -0.84
HIF3A-216ENST00000533789 TRBV7-7A0A0K0K1E9 115 aa9.81□□□□□ -0.84
HIF3A-216ENST00000533789 S100A6P06703 90 aa9.81□□□□□ -0.84
HIF3A-216ENST00000533789 CFC1BP0CG36 223 aa9.81□□□□□ -0.84
HIF3A-216ENST00000533789 BVES-AS1Q5T3Y7 98 aa9.81□□□□□ -0.84
HIF3A-216ENST00000533789 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.81□□□□□ -0.84
HIF3A-216ENST00000533789 PPDPFLQ8WWR9 84 aa9.8□□□□□ -0.84
HIF3A-216ENST00000533789 C12orf57Q99622 126 aa9.8□□□□□ -0.84
HIF3A-216ENST00000533789 OCIAD2Q56VL3 154 aa9.79□□□□□ -0.84
HIF3A-216ENST00000533789 HIST1H4GQ99525 98 aa9.79□□□□□ -0.84
HIF3A-216ENST00000533789 SCGB1D1O95968 90 aa9.76□□□□□ -0.85
HIF3A-216ENST00000533789 COX8AP10176 69 aa9.76□□□□□ -0.85
HIF3A-216ENST00000533789 S100A1P23297 94 aa9.74□□□□□ -0.85
HIF3A-216ENST00000533789 SNHG12Q9BXW3 62 aa9.73□□□□□ -0.85
HIF3A-216ENST00000533789 DLEU1O43261 78 aa9.72□□□□□ -0.85
HIF3A-216ENST00000533789 COX6B2Q6YFQ2 88 aa9.72□□□□□ -0.85
HIF3A-216ENST00000533789 H3BUT2 72 aa9.71□□□□□ -0.86
HIF3A-216ENST00000533789 LORP23490 312 aaPredicted RBP9.71□□□□□ -0.86
HIF3A-216ENST00000533789 KRTAP10-6P60371 365 aaPredicted RBP9.7□□□□□ -0.86
HIF3A-216ENST00000533789 FSIP2Q5CZC0 6907 aa9.7□□□□□ -0.86
HIF3A-216ENST00000533789 CFC1P0CG37 223 aa9.69□□□□□ -0.86
HIF3A-216ENST00000533789 FLGP20930 4061 aaPredicted RBP9.69□□□□□ -0.86
HIF3A-216ENST00000533789 OBSCN-AS1Q96MR7 158 aa9.69□□□□□ -0.86
HIF3A-216ENST00000533789 CRCT1Q9UGL9 99 aa9.69□□□□□ -0.86
HIF3A-216ENST00000533789 RAB37Q96AX2 223 aa9.68□□□□□ -0.86
HIF3A-216ENST00000533789 LST1O00453 97 aa9.67□□□□□ -0.86
HIF3A-216ENST00000533789 Q75L30 129 aa9.67□□□□□ -0.86
HIF3A-216ENST00000533789 A0A0B4J2C4 111 aa9.66□□□□□ -0.86
HIF3A-216ENST00000533789 M0R2T5 61 aa9.66□□□□□ -0.86
HIF3A-216ENST00000533789 Q6Q795 121 aa9.66□□□□□ -0.86
HIF3A-216ENST00000533789 HIGD1BQ9P298 99 aa9.66□□□□□ -0.86
HIF3A-216ENST00000533789 SS18L2Q9UHA2 77 aa9.66□□□□□ -0.86
HIF3A-216ENST00000533789 SNCGO76070 127 aa9.65□□□□□ -0.86
HIF3A-216ENST00000533789 C14orf144Q96I85 54 aa9.65□□□□□ -0.86
HIF3A-216ENST00000533789 H0YGX0 51 aa9.64□□□□□ -0.87
HIF3A-216ENST00000533789 ATP11AUNQ6ZP68 121 aa9.64□□□□□ -0.87
HIF3A-216ENST00000533789 FAM218AQ96MZ4 157 aa9.63□□□□□ -0.87
HIF3A-216ENST00000533789 SPATA45Q537H7 98 aa9.62□□□□□ -0.87
HIF3A-216ENST00000533789 TEN1Q86WV5 123 aa9.62□□□□□ -0.87
HIF3A-216ENST00000533789 PAM16Q9Y3D7 125 aa9.62□□□□□ -0.87
HIF3A-216ENST00000533789 NDUFV3P56181 108 aaKnown RBP9.61□□□□□ -0.87
HIF3A-216ENST00000533789 C2orf91Q6ZV80 131 aa9.61□□□□□ -0.87
HIF3A-216ENST00000533789 Q96NJ1 140 aa9.59□□□□□ -0.87
HIF3A-216ENST00000533789 VAMP8Q9BV40 100 aa9.58□□□□□ -0.88
HIF3A-216ENST00000533789 A0A1B0GX51 115 aa9.57□□□□□ -0.88
HIF3A-216ENST00000533789 A0A087WSZ3 146 aa9.56□□□□□ -0.88
HIF3A-216ENST00000533789 GHRHP01286 108 aa9.56□□□□□ -0.88
HIF3A-216ENST00000533789 CEND1Q8N111 149 aa9.56□□□□□ -0.88
HIF3A-216ENST00000533789 TMEM238LA0A1B0GVL6 79 aa9.55□□□□□ -0.88
HIF3A-216ENST00000533789 A6NJY4 79 aa9.55□□□□□ -0.88
HIF3A-216ENST00000533789 C20orf166-AS1Q96NR2 134 aa9.55□□□□□ -0.88
HIF3A-216ENST00000533789 PRO1854Q9UHT4 67 aa9.55□□□□□ -0.88
HIF3A-216ENST00000533789 H3BMG7 143 aa9.54□□□□□ -0.88
HIF3A-216ENST00000533789 A8MUU9 505 aa9.52□□□□□ -0.89
HIF3A-216ENST00000533789 FABP2P12104 132 aa9.52□□□□□ -0.89
HIF3A-216ENST00000533789 FXYD2P54710 66 aa9.51□□□□□ -0.89
HIF3A-216ENST00000533789 TRIAP1O43715 76 aa9.5□□□□□ -0.89
HIF3A-216ENST00000533789 A0A1W2PNM2 257 aa9.48□□□□□ -0.89
HIF3A-216ENST00000533789 SIGMAR1Q99720 223 aa9.46□□□□□ -0.9
HIF3A-216ENST00000533789 DSCR10P59022 87 aa9.45□□□□□ -0.9
HIF3A-216ENST00000533789 DNAL4O96015 105 aa9.44□□□□□ -0.9
HIF3A-216ENST00000533789 ORMDL1Q9P0S3 153 aa9.44□□□□□ -0.9
HIF3A-216ENST00000533789 TRBV7-4A0A0J9YYF1 115 aa9.42□□□□□ -0.9
HIF3A-216ENST00000533789 H3BQ85 93 aa9.42□□□□□ -0.9
HIF3A-216ENST00000533789 HSD52Q0P140 79 aa9.41□□□□□ -0.9
HIF3A-216ENST00000533789 ANKRD29Q8N6D5 301 aa9.41□□□□□ -0.9
HIF3A-216ENST00000533789 TRBV20-1A0A075B6N2 111 aa9.4□□□□□ -0.9
HIF3A-216ENST00000533789 A0A1B0GV72 72 aa9.39□□□□□ -0.91
HIF3A-216ENST00000533789 IGKV4-1P06312 121 aa9.39□□□□□ -0.91
HIF3A-216ENST00000533789 PSMB2P49721 201 aa9.39□□□□□ -0.91
HIF3A-216ENST00000533789 LINC00313P59037 77 aa9.39□□□□□ -0.91
HIF3A-216ENST00000533789 K7ERJ3 54 aa9.38□□□□□ -0.91
HIF3A-216ENST00000533789 KRTAP16-1A8MUX0 517 aa9.37□□□□□ -0.91
HIF3A-216ENST00000533789 TMEM256-PLSCR3K7ERE1 68 aa9.37□□□□□ -0.91
HIF3A-216ENST00000533789 COX6CP09669 75 aa9.37□□□□□ -0.91
HIF3A-216ENST00000533789 PYY3Q5JQD4 70 aa9.36□□□□□ -0.91
HIF3A-216ENST00000533789 CCKP06307 115 aa9.34□□□□□ -0.91
HIF3A-216ENST00000533789 TRACP01848 142 aa9.33□□□□□ -0.92
HIF3A-216ENST00000533789 LINC00472Q9H8W2 130 aa9.33□□□□□ -0.92
HIF3A-216ENST00000533789 UBE2V1Q13404 147 aa9.31□□□□□ -0.92
HIF3A-216ENST00000533789 NOTCH2NLQ7Z3S9 236 aa9.31□□□□□ -0.92
HIF3A-216ENST00000533789 KRTAP9-8Q9BYQ0 159 aa9.31□□□□□ -0.92
HIF3A-216ENST00000533789 DEFB116Q30KQ4 102 aa9.3□□□□□ -0.92
HIF3A-216ENST00000533789 IGHV6-1A0A0B4J1U7 121 aa9.28□□□□□ -0.92
HIF3A-216ENST00000533789 UQCR10Q9UDW1 63 aa9.27□□□□□ -0.93
HIF3A-216ENST00000533789 FAM236DA0A1B0GTK5 79 aa9.26□□□□□ -0.93
HIF3A-216ENST00000533789 FAM236CP0DP71 79 aa9.26□□□□□ -0.93
HIF3A-216ENST00000533789 MPLKIPQ8TAP9 179 aa9.25□□□□□ -0.93
HIF3A-216ENST00000533789 HRES1P13985 223 aa9.24□□□□□ -0.93
HIF3A-216ENST00000533789 VPS25Q9BRG1 176 aa9.24□□□□□ -0.93
HIF3A-216ENST00000533789 RBM3P98179 157 aaKnown RBP9.23□□□□□ -0.93
HIF3A-216ENST00000533789 RBM12B-AS1Q9P1G2 102 aa9.23□□□□□ -0.93
HIF3A-216ENST00000533789 A0A1B0GVX0 72 aa9.22□□□□□ -0.93
HIF3A-216ENST00000533789 C8orf87E5RJ46 101 aa9.22□□□□□ -0.93
HIF3A-216ENST00000533789 SCGB1C2P0DMR2 95 aa9.21□□□□□ -0.94
HIF3A-216ENST00000533789 DSCR8Q96T75 97 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms