RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 C1orf137Q5JT78 98 aa8.22□□□□□ -1.09
TRAPPC4-214ENST00000533632 LAMTOR3Q9UHA4 124 aa8.22□□□□□ -1.09
TRAPPC4-214ENST00000533632 MYCBP2O75592 4640 aa8.21□□□□□ -1.09
TRAPPC4-214ENST00000533632 BCE1O60756 84 aa8.2□□□□□ -1.1
TRAPPC4-214ENST00000533632 RPL37AP61513 92 aaKnown RBP8.2□□□□□ -1.1
TRAPPC4-214ENST00000533632 RBM3P98179 157 aaKnown RBP8.2□□□□□ -1.1
TRAPPC4-214ENST00000533632 C5orf47Q569G3 176 aa8.2□□□□□ -1.1
TRAPPC4-214ENST00000533632 FLG2Q5D862 2391 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC4-214ENST00000533632 IGLV5-48A0A075B6I7 105 aa8.2□□□□□ -1.1
TRAPPC4-214ENST00000533632 PDE6GP18545 87 aa8.2□□□□□ -1.1
TRAPPC4-214ENST00000533632 NDUFV3P56181 108 aaKnown RBP8.19□□□□□ -1.1
TRAPPC4-214ENST00000533632 PRLHP81277 87 aa8.19□□□□□ -1.1
TRAPPC4-214ENST00000533632 KRTAP13-1Q8IUC0 172 aa8.19□□□□□ -1.1
TRAPPC4-214ENST00000533632 SMCR5Q8TEV8 140 aa8.19□□□□□ -1.1
TRAPPC4-214ENST00000533632 C14orf132Q9NPU4 83 aa8.19□□□□□ -1.1
TRAPPC4-214ENST00000533632 PLA2G1BP04054 148 aaKnown RBP8.18□□□□□ -1.1
TRAPPC4-214ENST00000533632 IGLV7-43P04211 117 aa8.17□□□□□ -1.1
TRAPPC4-214ENST00000533632 UBE2AP49459 152 aa8.17□□□□□ -1.1
TRAPPC4-214ENST00000533632 Q8N377 158 aa8.17□□□□□ -1.1
TRAPPC4-214ENST00000533632 LRP1Q07954 4544 aaKnown RBP8.17□□□□□ -1.1
TRAPPC4-214ENST00000533632 LOC110117498A0A087WWA1 95 aa8.17□□□□□ -1.1
TRAPPC4-214ENST00000533632 LINC01547P58512 204 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC4-214ENST00000533632 DSCR8Q96T75 97 aa8.17□□□□□ -1.1
TRAPPC4-214ENST00000533632 ERC2-IT1O76042 136 aa8.16□□□□□ -1.1
TRAPPC4-214ENST00000533632 CCKP06307 115 aa8.16□□□□□ -1.1
TRAPPC4-214ENST00000533632 SS18L2Q9UHA2 77 aa8.16□□□□□ -1.1
TRAPPC4-214ENST00000533632 DEFB105AQ8NG35 78 aa8.15□□□□□ -1.1
TRAPPC4-214ENST00000533632 FAT3Q8TDW7 4589 aa8.15□□□□□ -1.1
TRAPPC4-214ENST00000533632 GAGE2AQ6NT46 116 aa8.15□□□□□ -1.11
TRAPPC4-214ENST00000533632 HIGD2AQ9BW72 106 aa8.15□□□□□ -1.11
TRAPPC4-214ENST00000533632 CDIP1Q9H305 208 aa8.15□□□□□ -1.11
TRAPPC4-214ENST00000533632 ST20-AS1Q8NBB2 130 aa8.13□□□□□ -1.11
TRAPPC4-214ENST00000533632 TRBV7-4A0A0J9YYF1 115 aa8.12□□□□□ -1.11
TRAPPC4-214ENST00000533632 ZNF861PO60384 105 aa8.12□□□□□ -1.11
TRAPPC4-214ENST00000533632 Q6ZQT0 140 aa8.12□□□□□ -1.11
TRAPPC4-214ENST00000533632 SMIM20Q8N5G0 67 aa8.11□□□□□ -1.11
TRAPPC4-214ENST00000533632 SPRR1BP22528 89 aa8.1□□□□□ -1.11
TRAPPC4-214ENST00000533632 F8WEM9 126 aa8.07□□□□□ -1.12
TRAPPC4-214ENST00000533632 SMIM29Q86T20 159 aa8.07□□□□□ -1.12
TRAPPC4-214ENST00000533632 ZNF706Q9Y5V0 76 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC4-214ENST00000533632 A0A1B0GW54 56 aa8.06□□□□□ -1.12
TRAPPC4-214ENST00000533632 SPINK6Q6UWN8 80 aa8.06□□□□□ -1.12
TRAPPC4-214ENST00000533632 LINC00643Q86TS7 51 aa8.06□□□□□ -1.12
TRAPPC4-214ENST00000533632 IGLV8-61A0A075B6I0 122 aa8.05□□□□□ -1.12
TRAPPC4-214ENST00000533632 C3orf22Q8N5N4 141 aa8.05□□□□□ -1.12
TRAPPC4-214ENST00000533632 LINC00846Q9NV44 126 aa8.05□□□□□ -1.12
TRAPPC4-214ENST00000533632 ANAPC13Q9BS18 74 aa8.04□□□□□ -1.12
TRAPPC4-214ENST00000533632 KRTAP1-4P0C5Y4 121 aa8.02□□□□□ -1.13
TRAPPC4-214ENST00000533632 UBL5Q9BZL1 73 aa8.02□□□□□ -1.13
TRAPPC4-214ENST00000533632 LINC00483Q53H64 154 aa8.02□□□□□ -1.13
TRAPPC4-214ENST00000533632 SPRR4Q96PI1 79 aa8.02□□□□□ -1.13
TRAPPC4-214ENST00000533632 ANAPC11Q9NYG5 84 aa8.02□□□□□ -1.13
TRAPPC4-214ENST00000533632 TNXBP22105 4242 aa8.01□□□□□ -1.13
TRAPPC4-214ENST00000533632 MT-ATP8P03928 68 aa8.01□□□□□ -1.13
TRAPPC4-214ENST00000533632 Q6JHZ5 121 aa8.01□□□□□ -1.13
TRAPPC4-214ENST00000533632 DMBT1Q9UGM3 2413 aaPredicted RBP8□□□□□ -1.13
TRAPPC4-214ENST00000533632 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC4-214ENST00000533632 IMUPQ9GZP8 106 aa7.99□□□□□ -1.13
TRAPPC4-214ENST00000533632 HERC1Q15751 4861 aa7.98□□□□□ -1.13
TRAPPC4-214ENST00000533632 ATP5EP2Q5VTU8 51 aa7.98□□□□□ -1.13
TRAPPC4-214ENST00000533632 Q8NBF4 154 aa7.98□□□□□ -1.13
TRAPPC4-214ENST00000533632 Q6Q795 121 aa7.97□□□□□ -1.13
TRAPPC4-214ENST00000533632 TRBV7-7A0A0K0K1E9 115 aa7.97□□□□□ -1.13
TRAPPC4-214ENST00000533632 A0A1W2PNM2 257 aa7.96□□□□□ -1.14
TRAPPC4-214ENST00000533632 IGFL1Q6UW32 110 aa7.96□□□□□ -1.14
TRAPPC4-214ENST00000533632 A0A087X002 238 aa7.95□□□□□ -1.14
TRAPPC4-214ENST00000533632 OXTP01178 125 aa7.95□□□□□ -1.14
TRAPPC4-214ENST00000533632 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
TRAPPC4-214ENST00000533632 CRYGAP11844 174 aa7.95□□□□□ -1.14
TRAPPC4-214ENST00000533632 Q6ZVQ6 151 aa7.94□□□□□ -1.14
TRAPPC4-214ENST00000533632 KRTAP13-2Q52LG2 175 aa7.92□□□□□ -1.14
TRAPPC4-214ENST00000533632 NREPQ16612 68 aa7.92□□□□□ -1.14
TRAPPC4-214ENST00000533632 PRR26Q8N8Z3 221 aa7.92□□□□□ -1.14
TRAPPC4-214ENST00000533632 FAM229BQ4G0N7 80 aa7.91□□□□□ -1.14
TRAPPC4-214ENST00000533632 CXCL6P80162 114 aa7.9□□□□□ -1.14
TRAPPC4-214ENST00000533632 IGLV9-49A0A0B4J1Y8 123 aa7.89□□□□□ -1.15
TRAPPC4-214ENST00000533632 KRTAP10-8P60410 259 aa7.89□□□□□ -1.15
TRAPPC4-214ENST00000533632 C9orf153Q5TBE3 101 aa7.89□□□□□ -1.15
TRAPPC4-214ENST00000533632 IGKV3D-7A0A0C4DH55 119 aa7.88□□□□□ -1.15
TRAPPC4-214ENST00000533632 J3QL48 77 aa7.88□□□□□ -1.15
TRAPPC4-214ENST00000533632 MOBPQ13875 183 aa7.85□□□□□ -1.15
TRAPPC4-214ENST00000533632 A0A0G2JQZ4 141 aa7.84□□□□□ -1.15
TRAPPC4-214ENST00000533632 SSBP3-AS1Q7Z2R9 100 aa7.84□□□□□ -1.15
TRAPPC4-214ENST00000533632 A0A087WSZ3 146 aa7.84□□□□□ -1.15
TRAPPC4-214ENST00000533632 J3KT08 172 aa7.84□□□□□ -1.15
TRAPPC4-214ENST00000533632 BPY2O14599 106 aa7.84□□□□□ -1.15
TRAPPC4-214ENST00000533632 RPS28P62857 69 aaKnown RBP7.84□□□□□ -1.15
TRAPPC4-214ENST00000533632 TYMSOSQ8TAI1 123 aa7.82□□□□□ -1.16
TRAPPC4-214ENST00000533632 CCDC179H3BU77 68 aa7.82□□□□□ -1.16
TRAPPC4-214ENST00000533632 HIST1H4AP62805 103 aaKnown RBP7.82□□□□□ -1.16
TRAPPC4-214ENST00000533632 CD164Q04900 197 aa7.81□□□□□ -1.16
TRAPPC4-214ENST00000533632 FAM236AA0A1B0GUQ0 79 aa7.77□□□□□ -1.17
TRAPPC4-214ENST00000533632 FAM236BA0A1B0GV22 79 aa7.77□□□□□ -1.17
TRAPPC4-214ENST00000533632 SEC61GP60059 68 aa7.76□□□□□ -1.17
TRAPPC4-214ENST00000533632 HMCN2Q8NDA2 5059 aa7.76□□□□□ -1.17
TRAPPC4-214ENST00000533632 A0A087WVE0 104 aa7.74□□□□□ -1.17
TRAPPC4-214ENST00000533632 LINC00304Q8N9R0 145 aa7.74□□□□□ -1.17
TRAPPC4-214ENST00000533632 LINC00472Q9H8W2 130 aa7.74□□□□□ -1.17
TRAPPC4-214ENST00000533632 ATOX1O00244 68 aa7.73□□□□□ -1.17
TRAPPC4-214ENST00000533632 HRCT1Q6UXD1 115 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms