RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 MRPL55Q7Z7F7 128 aaKnown RBP9.41□□□□□ -0.9
CAPN1-224ENST00000533129 MGAM2Q2M2H8 2515 aa9.4□□□□□ -0.9
CAPN1-224ENST00000533129 B9D2Q9BPU9 175 aa9.4□□□□□ -0.9
CAPN1-224ENST00000533129 TRAV22A0A0B4J277 110 aa9.39□□□□□ -0.91
CAPN1-224ENST00000533129 HUWE1Q7Z6Z7 4374 aaKnown RBP9.38□□□□□ -0.91
CAPN1-224ENST00000533129 MP68P56378 58 aa9.38□□□□□ -0.91
CAPN1-224ENST00000533129 REG3GQ6UW15 175 aa9.37□□□□□ -0.91
CAPN1-224ENST00000533129 IGFL1Q6UW32 110 aa9.37□□□□□ -0.91
CAPN1-224ENST00000533129 PRR4Q16378 134 aa9.36□□□□□ -0.91
CAPN1-224ENST00000533129 PSPHP1O15172 72 aa9.36□□□□□ -0.91
CAPN1-224ENST00000533129 IGLV8-61A0A075B6I0 122 aa9.34□□□□□ -0.91
CAPN1-224ENST00000533129 WFDC13Q8IUB5 93 aa9.34□□□□□ -0.91
CAPN1-224ENST00000533129 CASC10Q5T4H9 136 aa9.32□□□□□ -0.92
CAPN1-224ENST00000533129 KRTAP29-1A8MX34 341 aaPredicted RBP9.32□□□□□ -0.92
CAPN1-224ENST00000533129 SPANXA2-OT1Q8N9U9 137 aa9.32□□□□□ -0.92
CAPN1-224ENST00000533129 A0A0G2JQZ4 141 aa9.31□□□□□ -0.92
CAPN1-224ENST00000533129 A0A1W2PNN7 141 aa9.31□□□□□ -0.92
CAPN1-224ENST00000533129 LINC00588Q9Y4M8 146 aa9.31□□□□□ -0.92
CAPN1-224ENST00000533129 A0A087WSZ3 146 aa9.31□□□□□ -0.92
CAPN1-224ENST00000533129 H3BPC8 53 aa9.31□□□□□ -0.92
CAPN1-224ENST00000533129 DEFB116Q30KQ4 102 aa9.31□□□□□ -0.92
CAPN1-224ENST00000533129 LINC00208Q96KT6 92 aa9.3□□□□□ -0.92
CAPN1-224ENST00000533129 PMAIP1Q13794 54 aa9.3□□□□□ -0.92
CAPN1-224ENST00000533129 H3BS24 57 aa9.29□□□□□ -0.92
CAPN1-224ENST00000533129 A8MUN3 132 aa9.29□□□□□ -0.92
CAPN1-224ENST00000533129 DNAH9Q9NYC9 4486 aa9.28□□□□□ -0.92
CAPN1-224ENST00000533129 H0Y9P7 68 aa9.27□□□□□ -0.93
CAPN1-224ENST00000533129 KRTAP21-3Q3LHN1 58 aa9.26□□□□□ -0.93
CAPN1-224ENST00000533129 RPL37AP61513 92 aaKnown RBP9.25□□□□□ -0.93
CAPN1-224ENST00000533129 Q5VV11 94 aa9.25□□□□□ -0.93
CAPN1-224ENST00000533129 CASC2Q6XLA1 102 aa9.25□□□□□ -0.93
CAPN1-224ENST00000533129 PRLHP81277 87 aa9.24□□□□□ -0.93
CAPN1-224ENST00000533129 DNAH1Q9P2D7 4330 aa9.24□□□□□ -0.93
CAPN1-224ENST00000533129 LIMD2Q9BT23 127 aa9.23□□□□□ -0.93
CAPN1-224ENST00000533129 CNBPP62633 177 aaKnown RBP9.23□□□□□ -0.93
CAPN1-224ENST00000533129 Q8N9P0 234 aaPredicted RBP9.22□□□□□ -0.93
CAPN1-224ENST00000533129 UBE2AP49459 152 aa9.22□□□□□ -0.93
CAPN1-224ENST00000533129 APLNQ9ULZ1 77 aa9.22□□□□□ -0.93
CAPN1-224ENST00000533129 A8MWP4 228 aa9.21□□□□□ -0.93
CAPN1-224ENST00000533129 C9orf163Q8N9P6 203 aa9.21□□□□□ -0.94
CAPN1-224ENST00000533129 NUPR2A6NF83 97 aa9.2□□□□□ -0.94
CAPN1-224ENST00000533129 DNHD1Q96M86 4753 aa9.2□□□□□ -0.94
CAPN1-224ENST00000533129 COL7A1Q02388 2944 aa9.19□□□□□ -0.94
CAPN1-224ENST00000533129 LINC00472Q9H8W2 130 aa9.19□□□□□ -0.94
CAPN1-224ENST00000533129 C16orf90A8MZG2 172 aa9.18□□□□□ -0.94
CAPN1-224ENST00000533129 A0A096LNI7 61 aa9.18□□□□□ -0.94
CAPN1-224ENST00000533129 SPRR1BP22528 89 aa9.18□□□□□ -0.94
CAPN1-224ENST00000533129 UBE2DNLQ8IWF7 75 aa9.18□□□□□ -0.94
CAPN1-224ENST00000533129 STAB2Q8WWQ8 2551 aa9.17□□□□□ -0.94
CAPN1-224ENST00000533129 J3QL48 77 aa9.16□□□□□ -0.94
CAPN1-224ENST00000533129 CHKB-CPT1BH3BT56 60 aa9.16□□□□□ -0.94
CAPN1-224ENST00000533129 PRR15LQ9BU68 103 aa9.15□□□□□ -0.95
CAPN1-224ENST00000533129 IGKV2-24A0A0C4DH68 120 aa9.14□□□□□ -0.95
CAPN1-224ENST00000533129 A8MU10 97 aa9.14□□□□□ -0.95
CAPN1-224ENST00000533129 H0Y9J4 135 aa9.14□□□□□ -0.95
CAPN1-224ENST00000533129 A0A0A0MQY5 61 aa9.14□□□□□ -0.95
CAPN1-224ENST00000533129 DYNC2H1Q8NCM8 4307 aaKnown RBP9.14□□□□□ -0.95
CAPN1-224ENST00000533129 IGLV7-46A0A075B6I9 117 aa9.12□□□□□ -0.95
CAPN1-224ENST00000533129 MMP24-AS1A0A0U1RRL7 71 aa9.12□□□□□ -0.95
CAPN1-224ENST00000533129 Q75L30 129 aa9.12□□□□□ -0.95
CAPN1-224ENST00000533129 LOC101927531A0A1B0GV80 90 aa9.11□□□□□ -0.95
CAPN1-224ENST00000533129 COA5Q86WW8 74 aa9.11□□□□□ -0.95
CAPN1-224ENST00000533129 KRTAP1-5Q9BYS1 174 aa9.1□□□□□ -0.95
CAPN1-224ENST00000533129 MEGF8Q7Z7M0 2845 aa9.08□□□□□ -0.96
CAPN1-224ENST00000533129 PRKDCP78527 4128 aaKnown RBP9.08□□□□□ -0.96
CAPN1-224ENST00000533129 KRTAP11-1Q8IUC1 163 aa9.07□□□□□ -0.96
CAPN1-224ENST00000533129 CD164Q04900 197 aa9.07□□□□□ -0.96
CAPN1-224ENST00000533129 PHF5AQ7RTV0 110 aaKnown RBP9.07□□□□□ -0.96
CAPN1-224ENST00000533129 ATP11AUNQ6ZP68 121 aa9.06□□□□□ -0.96
CAPN1-224ENST00000533129 PRR26Q8N8Z3 221 aa9.05□□□□□ -0.96
CAPN1-224ENST00000533129 TP53AIP1Q9HCN2 124 aa9.05□□□□□ -0.96
CAPN1-224ENST00000533129 ASB16-AS1Q495Z4 193 aa9.05□□□□□ -0.96
CAPN1-224ENST00000533129 LCA10Q71F78 164 aa9.04□□□□□ -0.96
CAPN1-224ENST00000533129 NBDYA0A0U1RRE5 68 aa9.04□□□□□ -0.96
CAPN1-224ENST00000533129 A6NED7 52 aa9.03□□□□□ -0.96
CAPN1-224ENST00000533129 KTN1-AS1Q86SY8 53 aa9.03□□□□□ -0.96
CAPN1-224ENST00000533129 MOBPQ13875 183 aa9.03□□□□□ -0.96
CAPN1-224ENST00000533129 DNAH7Q8WXX0 4024 aa9.02□□□□□ -0.97
CAPN1-224ENST00000533129 CSMD3Q7Z407 3707 aa9.02□□□□□ -0.97
CAPN1-224ENST00000533129 CHTF8P0CG12 524 aa9.01□□□□□ -0.97
CAPN1-224ENST00000533129 Q6ZR54 194 aa9.01□□□□□ -0.97
CAPN1-224ENST00000533129 PLECQ15149 4684 aaKnown RBP9.01□□□□□ -0.97
CAPN1-224ENST00000533129 SPTSSBQ8NFR3 76 aa9.01□□□□□ -0.97
CAPN1-224ENST00000533129 C14orf177Q52M58 125 aa9□□□□□ -0.97
CAPN1-224ENST00000533129 PCOTHQ58A44 107 aa9□□□□□ -0.97
CAPN1-224ENST00000533129 Q96NJ1 140 aa9□□□□□ -0.97
CAPN1-224ENST00000533129 CDC42SE1Q9NRR8 79 aa9□□□□□ -0.97
CAPN1-224ENST00000533129 LINC01558Q9Y6Z2 57 aa9□□□□□ -0.97
CAPN1-224ENST00000533129 SRRM2Q9UQ35 2752 aaKnown RBP8.99□□□□□ -0.97
CAPN1-224ENST00000533129 PLAC8Q9NZF1 115 aa8.99□□□□□ -0.97
CAPN1-224ENST00000533129 LYSTQ99698 3801 aa8.98□□□□□ -0.97
CAPN1-224ENST00000533129 DNAH10Q8IVF4 4471 aa8.98□□□□□ -0.97
CAPN1-224ENST00000533129 STARD9Q9P2P6 4700 aa8.98□□□□□ -0.97
CAPN1-224ENST00000533129 TENM2Q9NT68 2774 aa8.98□□□□□ -0.97
CAPN1-224ENST00000533129 KRTAP13-1Q8IUC0 172 aa8.97□□□□□ -0.97
CAPN1-224ENST00000533129 C8orf17Q9NRJ1 99 aa8.97□□□□□ -0.97
CAPN1-224ENST00000533129 A6NN06 94 aa8.96□□□□□ -0.98
CAPN1-224ENST00000533129 NDUFS5O43920 106 aa8.95□□□□□ -0.98
CAPN1-224ENST00000533129 Q6ZRN7 208 aaPredicted RBP8.94□□□□□ -0.98
CAPN1-224ENST00000533129 SPAG11AQ6PDA7 123 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms