RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 TCL1BO95988 128 aa10.51□□□□□ -0.73
SCN4B-205ENST00000531550 SMCR5Q8TEV8 140 aa10.51□□□□□ -0.73
SCN4B-205ENST00000531550 RETNLBQ9BQ08 111 aa10.51□□□□□ -0.73
SCN4B-205ENST00000531550 TRACP01848 142 aa10.49□□□□□ -0.73
SCN4B-205ENST00000531550 ATXN8Q156A1 80 aa10.49□□□□□ -0.73
SCN4B-205ENST00000531550 TPRXLQ17RH7 258 aa10.48□□□□□ -0.73
SCN4B-205ENST00000531550 HIGD2AQ9BW72 106 aa10.48□□□□□ -0.73
SCN4B-205ENST00000531550 CDIP1Q9H305 208 aa10.48□□□□□ -0.73
SCN4B-205ENST00000531550 SPCS1Q9Y6A9 102 aa10.48□□□□□ -0.73
SCN4B-205ENST00000531550 KRTAP3-3Q9BYR6 98 aa10.47□□□□□ -0.73
SCN4B-205ENST00000531550 KRTAP3-2Q9BYR7 98 aa10.47□□□□□ -0.73
SCN4B-205ENST00000531550 ERC2-IT1O76042 136 aa10.46□□□□□ -0.73
SCN4B-205ENST00000531550 KRTAP13-2Q52LG2 175 aa10.46□□□□□ -0.73
SCN4B-205ENST00000531550 ANAPC11Q9NYG5 84 aa10.46□□□□□ -0.73
SCN4B-205ENST00000531550 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.45□□□□□ -0.74
SCN4B-205ENST00000531550 K7EP34 96 aa10.44□□□□□ -0.74
SCN4B-205ENST00000531550 DNAL4O96015 105 aa10.43□□□□□ -0.74
SCN4B-205ENST00000531550 OCIAD2Q56VL3 154 aa10.43□□□□□ -0.74
SCN4B-205ENST00000531550 GTF2H5Q6ZYL4 71 aa10.43□□□□□ -0.74
SCN4B-205ENST00000531550 LINC00304Q8N9R0 145 aa10.43□□□□□ -0.74
SCN4B-205ENST00000531550 A0A1B0GV90 55 aa10.42□□□□□ -0.74
SCN4B-205ENST00000531550 Q6ZQY7 126 aa10.42□□□□□ -0.74
SCN4B-205ENST00000531550 IGLV7-46A0A075B6I9 117 aa10.41□□□□□ -0.74
SCN4B-205ENST00000531550 H3BMG7 143 aa10.41□□□□□ -0.74
SCN4B-205ENST00000531550 GHRHP01286 108 aa10.4□□□□□ -0.74
SCN4B-205ENST00000531550 IGLV5-48A0A075B6I7 105 aa10.39□□□□□ -0.75
SCN4B-205ENST00000531550 H3BQ85 93 aa10.39□□□□□ -0.75
SCN4B-205ENST00000531550 ZNF706Q9Y5V0 76 aaPredicted RBP10.39□□□□□ -0.75
SCN4B-205ENST00000531550 LINC01547P58512 204 aaPredicted RBP10.38□□□□□ -0.75
SCN4B-205ENST00000531550 FAM229BQ4G0N7 80 aa10.38□□□□□ -0.75
SCN4B-205ENST00000531550 ST20-AS1Q8NBB2 130 aa10.38□□□□□ -0.75
SCN4B-205ENST00000531550 ORMDL1Q9P0S3 153 aa10.38□□□□□ -0.75
SCN4B-205ENST00000531550 PPDPFLQ8WWR9 84 aa10.37□□□□□ -0.75
SCN4B-205ENST00000531550 SPRR4Q96PI1 79 aa10.37□□□□□ -0.75
SCN4B-205ENST00000531550 C9JAW5 83 aa10.36□□□□□ -0.75
SCN4B-205ENST00000531550 SPRR1BP22528 89 aa10.36□□□□□ -0.75
SCN4B-205ENST00000531550 TEX49A0A1B0GTD5 131 aa10.35□□□□□ -0.75
SCN4B-205ENST00000531550 BAALC-AS2P0C853 105 aa10.35□□□□□ -0.75
SCN4B-205ENST00000531550 Q8N377 158 aa10.35□□□□□ -0.75
SCN4B-205ENST00000531550 TMEM256-PLSCR3K7ERE1 68 aa10.34□□□□□ -0.75
SCN4B-205ENST00000531550 UBE2V1Q13404 147 aa10.34□□□□□ -0.75
SCN4B-205ENST00000531550 DEFB105AQ8NG35 78 aa10.34□□□□□ -0.75
SCN4B-205ENST00000531550 LINC00483Q53H64 154 aa10.33□□□□□ -0.76
SCN4B-205ENST00000531550 H3BT86 120 aa10.32□□□□□ -0.76
SCN4B-205ENST00000531550 GAGE2AQ6NT46 116 aa10.32□□□□□ -0.76
SCN4B-205ENST00000531550 PRO0461Q9UI25 63 aa10.31□□□□□ -0.76
SCN4B-205ENST00000531550 FSIP2Q5CZC0 6907 aa10.29□□□□□ -0.76
SCN4B-205ENST00000531550 F8W1H4 67 aa10.29□□□□□ -0.76
SCN4B-205ENST00000531550 ANKRD29Q8N6D5 301 aa10.29□□□□□ -0.76
SCN4B-205ENST00000531550 CRCT1Q9UGL9 99 aa10.29□□□□□ -0.76
SCN4B-205ENST00000531550 SMIM29Q86T20 159 aa10.28□□□□□ -0.76
SCN4B-205ENST00000531550 MTURNQ8N3F0 131 aa10.28□□□□□ -0.76
SCN4B-205ENST00000531550 SMCPP49901 116 aaPredicted RBP10.27□□□□□ -0.77
SCN4B-205ENST00000531550 LAMTOR3Q9UHA4 124 aa10.26□□□□□ -0.77
SCN4B-205ENST00000531550 NDUFV3P56181 108 aaKnown RBP10.25□□□□□ -0.77
SCN4B-205ENST00000531550 C3orf22Q8N5N4 141 aa10.25□□□□□ -0.77
SCN4B-205ENST00000531550 ASB16-AS1Q495Z4 193 aa10.23□□□□□ -0.77
SCN4B-205ENST00000531550 FP248Q71RG6 208 aaPredicted RBP10.23□□□□□ -0.77
SCN4B-205ENST00000531550 KRTAP4-1Q9BYQ7 146 aa10.22□□□□□ -0.77
SCN4B-205ENST00000531550 IGLV8-61A0A075B6I0 122 aa10.2□□□□□ -0.78
SCN4B-205ENST00000531550 F8WEM9 126 aa10.2□□□□□ -0.78
SCN4B-205ENST00000531550 JMJD7-PLA2G4BH0Y9G9 81 aa10.2□□□□□ -0.78
SCN4B-205ENST00000531550 KRTAP13-3Q3SY46 172 aa10.2□□□□□ -0.78
SCN4B-205ENST00000531550 SPAG11AQ6PDA7 123 aa10.2□□□□□ -0.78
SCN4B-205ENST00000531550 OBSCN-AS1Q96MR7 158 aa10.18□□□□□ -0.78
SCN4B-205ENST00000531550 RBM3P98179 157 aaKnown RBP10.17□□□□□ -0.78
SCN4B-205ENST00000531550 SSBP3-AS1Q7Z2R9 100 aa10.16□□□□□ -0.78
SCN4B-205ENST00000531550 TEN1Q86WV5 123 aa10.16□□□□□ -0.78
SCN4B-205ENST00000531550 IGLV9-49A0A0B4J1Y8 123 aa10.15□□□□□ -0.78
SCN4B-205ENST00000531550 Q8NBF4 154 aa10.15□□□□□ -0.78
SCN4B-205ENST00000531550 SEC61BP60468 96 aaKnown RBP10.14□□□□□ -0.79
SCN4B-205ENST00000531550 Q6JHZ5 121 aa10.14□□□□□ -0.79
SCN4B-205ENST00000531550 MOBPQ13875 183 aa10.13□□□□□ -0.79
SCN4B-205ENST00000531550 ETDBQ3ZM63 59 aa10.13□□□□□ -0.79
SCN4B-205ENST00000531550 C9orf153Q5TBE3 101 aa10.13□□□□□ -0.79
SCN4B-205ENST00000531550 TRBV7-4A0A0J9YYF1 115 aa10.12□□□□□ -0.79
SCN4B-205ENST00000531550 C4orf48Q5BLP8 95 aa10.12□□□□□ -0.79
SCN4B-205ENST00000531550 DSCR8Q96T75 97 aa10.11□□□□□ -0.79
SCN4B-205ENST00000531550 A0A1B0GV72 72 aa10.1□□□□□ -0.79
SCN4B-205ENST00000531550 PDE6GP18545 87 aa10.1□□□□□ -0.79
SCN4B-205ENST00000531550 LOC110117498A0A087WWA1 95 aa10.09□□□□□ -0.79
SCN4B-205ENST00000531550 IGFL1Q6UW32 110 aa10.09□□□□□ -0.79
SCN4B-205ENST00000531550 C21orf62-AS1Q17RA5 79 aa10.08□□□□□ -0.8
SCN4B-205ENST00000531550 C14orf132Q9NPU4 83 aa10.08□□□□□ -0.8
SCN4B-205ENST00000531550 Q6ZQT0 140 aa10.06□□□□□ -0.8
SCN4B-205ENST00000531550 LCE2CQ5TA81 110 aa10.05□□□□□ -0.8
SCN4B-205ENST00000531550 SPINK1P00995 79 aa10.04□□□□□ -0.8
SCN4B-205ENST00000531550 A0A0G2JQZ4 141 aa10.03□□□□□ -0.8
SCN4B-205ENST00000531550 CD164Q04900 197 aa10.03□□□□□ -0.8
SCN4B-205ENST00000531550 Q6Q795 121 aa10.03□□□□□ -0.8
SCN4B-205ENST00000531550 A0A1W2PNM2 257 aa10.02□□□□□ -0.81
SCN4B-205ENST00000531550 CCKP06307 115 aa10.02□□□□□ -0.81
SCN4B-205ENST00000531550 XP32Q5T750 250 aa10□□□□□ -0.81
SCN4B-205ENST00000531550 A0A1B0GW54 56 aa9.99□□□□□ -0.81
SCN4B-205ENST00000531550 MT1HP80294 61 aa9.97□□□□□ -0.81
SCN4B-205ENST00000531550 KRTAP19-2Q3LHN2 52 aa9.97□□□□□ -0.81
SCN4B-205ENST00000531550 RPS29P62273 56 aaKnown RBP9.96□□□□□ -0.82
SCN4B-205ENST00000531550 VPS25Q9BRG1 176 aa9.96□□□□□ -0.82
SCN4B-205ENST00000531550 TRBV7-7A0A0K0K1E9 115 aa9.95□□□□□ -0.82
SCN4B-205ENST00000531550 HRCT1Q6UXD1 115 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms