RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 TECTAO75443 2155 aa1.42□□□□□ -2.18
PTPRK-220ENST00000531466 CNOT1A5YKK6 2376 aaKnown RBP1.42□□□□□ -2.18
PTPRK-220ENST00000531466 RP1L1Q8IWN7 2480 aaPredicted RBP1.42□□□□□ -2.18
PTPRK-220ENST00000531466 PTPRZ1P23471 2315 aaPredicted RBP1.41□□□□□ -2.18
PTPRK-220ENST00000531466 ASH1LQ9NR48 2969 aaKnown RBP1.41□□□□□ -2.18
PTPRK-220ENST00000531466 TEP1Q99973 2627 aaKnown RBP1.41□□□□□ -2.18
PTPRK-220ENST00000531466 H1FX-AS1Q4G0G2 97 aa1.41□□□□□ -2.18
PTPRK-220ENST00000531466 TMEM167AQ8TBQ9 72 aa1.41□□□□□ -2.18
PTPRK-220ENST00000531466 LEAP2Q969E1 77 aa1.41□□□□□ -2.18
PTPRK-220ENST00000531466 KAAG1Q9UBP8 84 aa1.41□□□□□ -2.18
PTPRK-220ENST00000531466 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.41□□□□□ -2.18
PTPRK-220ENST00000531466 ABCA2Q9BZC7 2435 aa1.41□□□□□ -2.18
PTPRK-220ENST00000531466 LAMA2P24043 3122 aaKnown RBP1.41□□□□□ -2.18
PTPRK-220ENST00000531466 ASXL3Q9C0F0 2248 aa1.4□□□□□ -2.18
PTPRK-220ENST00000531466 ITPR3Q14573 2671 aa1.4□□□□□ -2.19
PTPRK-220ENST00000531466 ICE1Q9Y2F5 2266 aa1.4□□□□□ -2.19
PTPRK-220ENST00000531466 MMP24-AS1A0A0U1RRL7 71 aa1.4□□□□□ -2.19
PTPRK-220ENST00000531466 COX6A2Q02221 97 aa1.4□□□□□ -2.19
PTPRK-220ENST00000531466 Q6ZSA8 131 aa1.4□□□□□ -2.19
PTPRK-220ENST00000531466 DEFB106AQ8N104 65 aa1.4□□□□□ -2.19
PTPRK-220ENST00000531466 EP400Q96L91 3159 aa1.4□□□□□ -2.19
PTPRK-220ENST00000531466 SETD2Q9BYW2 2564 aaPredicted RBP1.4□□□□□ -2.19
PTPRK-220ENST00000531466 FAM208BQ5VWN6 2430 aa1.39□□□□□ -2.19
PTPRK-220ENST00000531466 KALRNO60229 2985 aa1.39□□□□□ -2.19
PTPRK-220ENST00000531466 SORL1Q92673 2214 aa1.39□□□□□ -2.19
PTPRK-220ENST00000531466 VCANP13611 3396 aa1.39□□□□□ -2.19
PTPRK-220ENST00000531466 DEFB103AP81534 67 aa1.39□□□□□ -2.19
PTPRK-220ENST00000531466 DEFB109BQ30KR1 87 aa1.39□□□□□ -2.19
PTPRK-220ENST00000531466 NCOR1O75376 2440 aa1.39□□□□□ -2.19
PTPRK-220ENST00000531466 SPTBN4Q9H254 2564 aa1.39□□□□□ -2.19
PTPRK-220ENST00000531466 ALMS1Q8TCU4 4167 aa1.38□□□□□ -2.19
PTPRK-220ENST00000531466 UNC80Q8N2C7 3258 aa1.38□□□□□ -2.19
PTPRK-220ENST00000531466 MYO18BQ8IUG5 2567 aa1.38□□□□□ -2.19
PTPRK-220ENST00000531466 DEFB130BP0DP73 79 aa1.38□□□□□ -2.19
PTPRK-220ENST00000531466 DEFB130AP0DP74 79 aa1.38□□□□□ -2.19
PTPRK-220ENST00000531466 PRO0255Q9UI72 69 aa1.38□□□□□ -2.19
PTPRK-220ENST00000531466 KNL1Q8NG31 2342 aa1.38□□□□□ -2.19
PTPRK-220ENST00000531466 ZFHX4Q86UP3 3567 aa1.37□□□□□ -2.19
PTPRK-220ENST00000531466 AHCTF1Q8WYP5 2266 aa1.37□□□□□ -2.19
PTPRK-220ENST00000531466 PTPRQQ9UMZ3 2332 aa1.37□□□□□ -2.19
PTPRK-220ENST00000531466 SPTBN5Q9NRC6 3674 aaKnown RBP1.37□□□□□ -2.19
PTPRK-220ENST00000531466 CEP290O15078 2479 aa1.37□□□□□ -2.19
PTPRK-220ENST00000531466 K7EIL1 84 aa1.37□□□□□ -2.19
PTPRK-220ENST00000531466 K7EIM0 57 aa1.37□□□□□ -2.19
PTPRK-220ENST00000531466 WT1-ASQ06250 92 aa1.37□□□□□ -2.19
PTPRK-220ENST00000531466 TOMM7Q9P0U1 55 aa1.37□□□□□ -2.19
PTPRK-220ENST00000531466 HECTD1Q9ULT8 2610 aa1.37□□□□□ -2.19
PTPRK-220ENST00000531466 ASCC3Q8N3C0 2202 aaKnown RBP1.37□□□□□ -2.19
PTPRK-220ENST00000531466 EYSQ5T1H1 3165 aa1.37□□□□□ -2.19
PTPRK-220ENST00000531466 ACACBO00763 2458 aa1.37□□□□□ -2.19
PTPRK-220ENST00000531466 DOPEY2Q9Y3R5 2298 aa1.36□□□□□ -2.19
PTPRK-220ENST00000531466 Q5VSD8 79 aa1.36□□□□□ -2.19
PTPRK-220ENST00000531466 C10orf95Q9H7T3 257 aa1.36□□□□□ -2.19
PTPRK-220ENST00000531466 LRRK2Q5S007 2527 aa1.36□□□□□ -2.19
PTPRK-220ENST00000531466 GOLGB1Q14789 3259 aaKnown RBP1.35□□□□□ -2.19
PTPRK-220ENST00000531466 FLNCQ14315 2725 aa1.35□□□□□ -2.19
PTPRK-220ENST00000531466 MUC3AQ02505 3323 aa1.35□□□□□ -2.19
PTPRK-220ENST00000531466 CFAP47Q6ZTR5 3102 aa1.35□□□□□ -2.19
PTPRK-220ENST00000531466 NOTCH1P46531 2555 aa1.34□□□□□ -2.19
PTPRK-220ENST00000531466 PLCE1Q9P212 2302 aa1.34□□□□□ -2.2
PTPRK-220ENST00000531466 C2CD3Q4AC94 2353 aa1.34□□□□□ -2.2
PTPRK-220ENST00000531466 RANBP2P49792 3224 aaKnown RBP1.34□□□□□ -2.2
PTPRK-220ENST00000531466 CREBBPQ92793 2442 aa1.34□□□□□ -2.2
PTPRK-220ENST00000531466 DNAH12Q6ZR08 3092 aa1.34□□□□□ -2.2
PTPRK-220ENST00000531466 SPTAN1Q13813 2472 aaKnown RBP1.33□□□□□ -2.2
PTPRK-220ENST00000531466 WNK2Q9Y3S1 2297 aa1.33□□□□□ -2.2
PTPRK-220ENST00000531466 RPL39P5Q59GN2 51 aa1.33□□□□□ -2.2
PTPRK-220ENST00000531466 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
PTPRK-220ENST00000531466 DEFB105AQ8NG35 78 aa1.33□□□□□ -2.2
PTPRK-220ENST00000531466 NOP10Q9NPE3 64 aaKnown RBP1.33□□□□□ -2.2
PTPRK-220ENST00000531466 APLNQ9ULZ1 77 aa1.33□□□□□ -2.2
PTPRK-220ENST00000531466 HELZ2Q9BYK8 2649 aaKnown RBP1.33□□□□□ -2.2
PTPRK-220ENST00000531466 SPTA1P02549 2419 aa1.32□□□□□ -2.2
PTPRK-220ENST00000531466 REV3LO60673 3130 aa1.32□□□□□ -2.2
PTPRK-220ENST00000531466 NAV3Q8IVL0 2385 aa1.32□□□□□ -2.2
PTPRK-220ENST00000531466 SPRR1AP35321 89 aa1.32□□□□□ -2.2
PTPRK-220ENST00000531466 LELP1Q5T871 98 aa1.32□□□□□ -2.2
PTPRK-220ENST00000531466 DEFB119Q8N690 84 aa1.32□□□□□ -2.2
PTPRK-220ENST00000531466 MYO9AB2RTY4 2548 aa1.32□□□□□ -2.2
PTPRK-220ENST00000531466 PIEZO2Q9H5I5 2752 aa1.31□□□□□ -2.2
PTPRK-220ENST00000531466 PRLHP81277 87 aa1.31□□□□□ -2.2
PTPRK-220ENST00000531466 CLPSL2Q6UWE3 100 aa1.31□□□□□ -2.2
PTPRK-220ENST00000531466 RIF1Q5UIP0 2472 aaKnown RBP1.31□□□□□ -2.2
PTPRK-220ENST00000531466 USF3Q68DE3 2245 aa1.31□□□□□ -2.2
PTPRK-220ENST00000531466 MKI67P46013 3256 aaKnown RBP1.3□□□□□ -2.2
PTPRK-220ENST00000531466 BRCA2P51587 3418 aa1.3□□□□□ -2.2
PTPRK-220ENST00000531466 JMJD1CQ15652 2540 aa1.3□□□□□ -2.2
PTPRK-220ENST00000531466 A8MTW9 85 aa1.3□□□□□ -2.2
PTPRK-220ENST00000531466 J3QKU1 62 aa1.3□□□□□ -2.2
PTPRK-220ENST00000531466 CFAP54Q96N23 3096 aa1.3□□□□□ -2.2
PTPRK-220ENST00000531466 CNTRLQ7Z7A1 2325 aa1.29□□□□□ -2.2
PTPRK-220ENST00000531466 ATRQ13535 2644 aa1.29□□□□□ -2.2
PTPRK-220ENST00000531466 UBR5O95071 2799 aaPredicted RBP1.29□□□□□ -2.2
PTPRK-220ENST00000531466 DEFB108AA8MXU0 73 aa1.29□□□□□ -2.2
PTPRK-220ENST00000531466 S4R3F8 94 aa1.29□□□□□ -2.2
PTPRK-220ENST00000531466 PCNX1Q96RV3 2341 aa1.29□□□□□ -2.2
PTPRK-220ENST00000531466 CEP295Q9C0D2 2601 aa1.29□□□□□ -2.2
PTPRK-220ENST00000531466 TEX15Q9BXT5 2789 aa1.29□□□□□ -2.2
PTPRK-220ENST00000531466 FLG2Q5D862 2391 aaPredicted RBP1.28□□□□□ -2.2
PTPRK-220ENST00000531466 MAP1BP46821 2468 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms