RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 COPS9Q8WXC6 57 aa9.65□□□□□ -0.86
SSSCA1-206ENST00000531405 NHP2Q9NX24 153 aaKnown RBP9.64□□□□□ -0.87
SSSCA1-206ENST00000531405 Q6Q795 121 aa9.62□□□□□ -0.87
SSSCA1-206ENST00000531405 PCP2Q8IVA1 136 aa9.62□□□□□ -0.87
SSSCA1-206ENST00000531405 F8WEM9 126 aa9.61□□□□□ -0.87
SSSCA1-206ENST00000531405 Q6ZVH6 145 aa9.61□□□□□ -0.87
SSSCA1-206ENST00000531405 ATOH7Q8N100 152 aa9.61□□□□□ -0.87
SSSCA1-206ENST00000531405 TRAV13-2A0A0B4J235 113 aa9.6□□□□□ -0.87
SSSCA1-206ENST00000531405 OBSCN-AS1Q96MR7 158 aa9.58□□□□□ -0.88
SSSCA1-206ENST00000531405 PYY3Q5JQD4 70 aa9.57□□□□□ -0.88
SSSCA1-206ENST00000531405 TRBV7-7A0A0K0K1E9 115 aa9.56□□□□□ -0.88
SSSCA1-206ENST00000531405 SMIM6P0DI80 62 aa9.56□□□□□ -0.88
SSSCA1-206ENST00000531405 IGFL1Q6UW32 110 aa9.56□□□□□ -0.88
SSSCA1-206ENST00000531405 Q6ZQY7 126 aa9.56□□□□□ -0.88
SSSCA1-206ENST00000531405 C20orf202A1L168 122 aa9.55□□□□□ -0.88
SSSCA1-206ENST00000531405 LINC00575Q6W349 94 aa9.55□□□□□ -0.88
SSSCA1-206ENST00000531405 ATP11AUNQ6ZP68 121 aa9.55□□□□□ -0.88
SSSCA1-206ENST00000531405 CLEC2BQ92478 149 aa9.55□□□□□ -0.88
SSSCA1-206ENST00000531405 Q6JHZ5 121 aa9.54□□□□□ -0.88
SSSCA1-206ENST00000531405 Q75L30 129 aa9.54□□□□□ -0.88
SSSCA1-206ENST00000531405 VAMP3Q15836 100 aa9.53□□□□□ -0.88
SSSCA1-206ENST00000531405 SCGB1D1O95968 90 aa9.52□□□□□ -0.89
SSSCA1-206ENST00000531405 hADV29S1A0JD25 119 aa9.51□□□□□ -0.89
SSSCA1-206ENST00000531405 USH2AO75445 5202 aa9.5□□□□□ -0.89
SSSCA1-206ENST00000531405 OCIAD2Q56VL3 154 aa9.5□□□□□ -0.89
SSSCA1-206ENST00000531405 SSPOA2VEC9 5147 aa9.48□□□□□ -0.89
SSSCA1-206ENST00000531405 Q96NJ1 140 aa9.47□□□□□ -0.89
SSSCA1-206ENST00000531405 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.45□□□□□ -0.9
SSSCA1-206ENST00000531405 C12orf57Q99622 126 aa9.45□□□□□ -0.9
SSSCA1-206ENST00000531405 KRTAP9-8Q9BYQ0 159 aa9.45□□□□□ -0.9
SSSCA1-206ENST00000531405 H3BUT2 72 aa9.44□□□□□ -0.9
SSSCA1-206ENST00000531405 LST1O00453 97 aa9.44□□□□□ -0.9
SSSCA1-206ENST00000531405 KRTAP9-7A8MTY7 169 aa9.43□□□□□ -0.9
SSSCA1-206ENST00000531405 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.43□□□□□ -0.9
SSSCA1-206ENST00000531405 VAMP8Q9BV40 100 aa9.42□□□□□ -0.9
SSSCA1-206ENST00000531405 CFC1P0CG37 223 aa9.41□□□□□ -0.9
SSSCA1-206ENST00000531405 SNHG12Q9BXW3 62 aa9.41□□□□□ -0.9
SSSCA1-206ENST00000531405 HSBP1L1C9JCN9 74 aa9.39□□□□□ -0.91
SSSCA1-206ENST00000531405 C20orf166-AS1Q96NR2 134 aa9.39□□□□□ -0.91
SSSCA1-206ENST00000531405 PPDPFLQ8WWR9 84 aa9.38□□□□□ -0.91
SSSCA1-206ENST00000531405 PAM16Q9Y3D7 125 aa9.38□□□□□ -0.91
SSSCA1-206ENST00000531405 A8MUU9 505 aa9.37□□□□□ -0.91
SSSCA1-206ENST00000531405 SPATA45Q537H7 98 aa9.37□□□□□ -0.91
SSSCA1-206ENST00000531405 BVES-AS1Q5T3Y7 98 aa9.35□□□□□ -0.91
SSSCA1-206ENST00000531405 SS18L2Q9UHA2 77 aa9.34□□□□□ -0.91
SSSCA1-206ENST00000531405 TRBV20-1A0A075B6N2 111 aa9.33□□□□□ -0.92
SSSCA1-206ENST00000531405 DLEU1O43261 78 aa9.32□□□□□ -0.92
SSSCA1-206ENST00000531405 COX8AP10176 69 aa9.32□□□□□ -0.92
SSSCA1-206ENST00000531405 FCGBPQ9Y6R7 5405 aaPredicted RBP9.31□□□□□ -0.92
SSSCA1-206ENST00000531405 DSCR10P59022 87 aa9.3□□□□□ -0.92
SSSCA1-206ENST00000531405 HIST1H4GQ99525 98 aa9.3□□□□□ -0.92
SSSCA1-206ENST00000531405 A0A087WSZ3 146 aa9.29□□□□□ -0.92
SSSCA1-206ENST00000531405 TSTD3H0UI37 97 aa9.29□□□□□ -0.92
SSSCA1-206ENST00000531405 MT2AP02795 61 aa9.29□□□□□ -0.92
SSSCA1-206ENST00000531405 TEN1Q86WV5 123 aa9.29□□□□□ -0.92
SSSCA1-206ENST00000531405 C14orf144Q96I85 54 aa9.28□□□□□ -0.92
SSSCA1-206ENST00000531405 UQCR10Q9UDW1 63 aa9.28□□□□□ -0.92
SSSCA1-206ENST00000531405 NDUFV3P56181 108 aaKnown RBP9.27□□□□□ -0.93
SSSCA1-206ENST00000531405 KRTAP16-1A8MUX0 517 aa9.26□□□□□ -0.93
SSSCA1-206ENST00000531405 FAM218AQ96MZ4 157 aa9.25□□□□□ -0.93
SSSCA1-206ENST00000531405 FAM236DA0A1B0GTK5 79 aa9.24□□□□□ -0.93
SSSCA1-206ENST00000531405 FAM236CP0DP71 79 aa9.24□□□□□ -0.93
SSSCA1-206ENST00000531405 SIGMAR1Q99720 223 aa9.23□□□□□ -0.93
SSSCA1-206ENST00000531405 HIGD1BQ9P298 99 aa9.23□□□□□ -0.93
SSSCA1-206ENST00000531405 LCE2BO14633 110 aa9.22□□□□□ -0.93
SSSCA1-206ENST00000531405 MT1FP04733 61 aa9.22□□□□□ -0.93
SSSCA1-206ENST00000531405 C2orf91Q6ZV80 131 aa9.22□□□□□ -0.93
SSSCA1-206ENST00000531405 H3BMG7 143 aa9.21□□□□□ -0.94
SSSCA1-206ENST00000531405 KRTAP19-1Q8IUB9 90 aa9.2□□□□□ -0.94
SSSCA1-206ENST00000531405 SNCGO76070 127 aa9.19□□□□□ -0.94
SSSCA1-206ENST00000531405 RAB37Q96AX2 223 aa9.19□□□□□ -0.94
SSSCA1-206ENST00000531405 A0A1W2PNM2 257 aa9.18□□□□□ -0.94
SSSCA1-206ENST00000531405 H0YGX0 51 aa9.18□□□□□ -0.94
SSSCA1-206ENST00000531405 LINC00313P59037 77 aa9.17□□□□□ -0.94
SSSCA1-206ENST00000531405 FABP2P12104 132 aa9.16□□□□□ -0.94
SSSCA1-206ENST00000531405 HRES1P13985 223 aa9.16□□□□□ -0.94
SSSCA1-206ENST00000531405 KRTAP9-3Q9BYQ3 159 aa9.16□□□□□ -0.94
SSSCA1-206ENST00000531405 KRTAP10-10P60014 251 aa9.15□□□□□ -0.94
SSSCA1-206ENST00000531405 NOTCH2NLQ7Z3S9 236 aa9.15□□□□□ -0.94
SSSCA1-206ENST00000531405 MPLKIPQ8TAP9 179 aa9.15□□□□□ -0.94
SSSCA1-206ENST00000531405 IGKV4-1P06312 121 aa9.14□□□□□ -0.95
SSSCA1-206ENST00000531405 A0A0B4J2C4 111 aa9.13□□□□□ -0.95
SSSCA1-206ENST00000531405 RBM12B-AS1Q9P1G2 102 aa9.13□□□□□ -0.95
SSSCA1-206ENST00000531405 PCP4L1A6NKN8 68 aa9.12□□□□□ -0.95
SSSCA1-206ENST00000531405 HSD52Q0P140 79 aa9.12□□□□□ -0.95
SSSCA1-206ENST00000531405 A0A1B0GV72 72 aa9.11□□□□□ -0.95
SSSCA1-206ENST00000531405 MACF1Q9UPN3 7388 aaKnown RBP9.11□□□□□ -0.95
SSSCA1-206ENST00000531405 DEFB116Q30KQ4 102 aa9.1□□□□□ -0.95
SSSCA1-206ENST00000531405 A0A1B0GX51 115 aa9.08□□□□□ -0.96
SSSCA1-206ENST00000531405 SYNE2Q8WXH0 6885 aaKnown RBP9.07□□□□□ -0.96
SSSCA1-206ENST00000531405 M0R143 59 aa9.07□□□□□ -0.96
SSSCA1-206ENST00000531405 GHRHP01286 108 aa9.07□□□□□ -0.96
SSSCA1-206ENST00000531405 CEND1Q8N111 149 aa9.07□□□□□ -0.96
SSSCA1-206ENST00000531405 TRBV7-4A0A0J9YYF1 115 aa9.06□□□□□ -0.96
SSSCA1-206ENST00000531405 ANKRD29Q8N6D5 301 aa9.06□□□□□ -0.96
SSSCA1-206ENST00000531405 IGHV6-1A0A0B4J1U7 121 aa9.05□□□□□ -0.96
SSSCA1-206ENST00000531405 TRIAP1O43715 76 aa9.04□□□□□ -0.96
SSSCA1-206ENST00000531405 LINC00472Q9H8W2 130 aa9.04□□□□□ -0.96
SSSCA1-206ENST00000531405 PRO1854Q9UHT4 67 aa9.04□□□□□ -0.96
SSSCA1-206ENST00000531405 FXYD2P54710 66 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms