RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 Q6ZQY7 126 aa11.18□□□□□ -0.62
SMPD1-204ENST00000530395 Q6JHZ5 121 aa11.17□□□□□ -0.62
SMPD1-204ENST00000530395 HIST3H2BBQ8N257 126 aa11.16□□□□□ -0.62
SMPD1-204ENST00000530395 FSIP2Q5CZC0 6907 aa11.16□□□□□ -0.62
SMPD1-204ENST00000530395 CLEC2BQ92478 149 aa11.15□□□□□ -0.62
SMPD1-204ENST00000530395 HIST1H2BLQ99880 126 aa11.15□□□□□ -0.62
SMPD1-204ENST00000530395 TRBV7-7A0A0K0K1E9 115 aa11.11□□□□□ -0.63
SMPD1-204ENST00000530395 IGFL1Q6UW32 110 aa11.11□□□□□ -0.63
SMPD1-204ENST00000530395 OCIAD2Q56VL3 154 aa11.1□□□□□ -0.63
SMPD1-204ENST00000530395 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.1□□□□□ -0.63
SMPD1-204ENST00000530395 COX6B2Q6YFQ2 88 aa11.1□□□□□ -0.63
SMPD1-204ENST00000530395 BVES-AS1Q5T3Y7 98 aa11.09□□□□□ -0.63
SMPD1-204ENST00000530395 PPDPFLQ8WWR9 84 aa11.09□□□□□ -0.63
SMPD1-204ENST00000530395 CRCT1Q9UGL9 99 aa11.08□□□□□ -0.64
SMPD1-204ENST00000530395 HIST1H4GQ99525 98 aa11.07□□□□□ -0.64
SMPD1-204ENST00000530395 C12orf57Q99622 126 aa11.07□□□□□ -0.64
SMPD1-204ENST00000530395 M0R2T5 61 aa11.06□□□□□ -0.64
SMPD1-204ENST00000530395 S100A6P06703 90 aa11.06□□□□□ -0.64
SMPD1-204ENST00000530395 FLGP20930 4061 aaPredicted RBP11.06□□□□□ -0.64
SMPD1-204ENST00000530395 SNHG12Q9BXW3 62 aa11.05□□□□□ -0.64
SMPD1-204ENST00000530395 SCGB1D1O95968 90 aa11.03□□□□□ -0.64
SMPD1-204ENST00000530395 LORP23490 312 aaPredicted RBP11.03□□□□□ -0.64
SMPD1-204ENST00000530395 KRTAP10-6P60371 365 aaPredicted RBP11.03□□□□□ -0.64
SMPD1-204ENST00000530395 OBSCN-AS1Q96MR7 158 aa11.01□□□□□ -0.65
SMPD1-204ENST00000530395 LST1O00453 97 aa10.99□□□□□ -0.65
SMPD1-204ENST00000530395 COX8AP10176 69 aa10.99□□□□□ -0.65
SMPD1-204ENST00000530395 ATP11AUNQ6ZP68 121 aa10.99□□□□□ -0.65
SMPD1-204ENST00000530395 H3BUT2 72 aa10.98□□□□□ -0.65
SMPD1-204ENST00000530395 SNCGO76070 127 aa10.98□□□□□ -0.65
SMPD1-204ENST00000530395 Q75L30 129 aa10.98□□□□□ -0.65
SMPD1-204ENST00000530395 SS18L2Q9UHA2 77 aa10.97□□□□□ -0.65
SMPD1-204ENST00000530395 DLEU1O43261 78 aa10.95□□□□□ -0.66
SMPD1-204ENST00000530395 RAB37Q96AX2 223 aa10.95□□□□□ -0.66
SMPD1-204ENST00000530395 S100A1P23297 94 aa10.93□□□□□ -0.66
SMPD1-204ENST00000530395 H0YGX0 51 aa10.92□□□□□ -0.66
SMPD1-204ENST00000530395 CFC1P0CG37 223 aa10.92□□□□□ -0.66
SMPD1-204ENST00000530395 Q6Q795 121 aa10.91□□□□□ -0.66
SMPD1-204ENST00000530395 Q96NJ1 140 aa10.9□□□□□ -0.66
SMPD1-204ENST00000530395 A0A0B4J2C4 111 aa10.89□□□□□ -0.67
SMPD1-204ENST00000530395 TEN1Q86WV5 123 aa10.89□□□□□ -0.67
SMPD1-204ENST00000530395 NDUFV3P56181 108 aaKnown RBP10.88□□□□□ -0.67
SMPD1-204ENST00000530395 C14orf144Q96I85 54 aa10.88□□□□□ -0.67
SMPD1-204ENST00000530395 HIGD1BQ9P298 99 aa10.88□□□□□ -0.67
SMPD1-204ENST00000530395 GHRHP01286 108 aa10.87□□□□□ -0.67
SMPD1-204ENST00000530395 FAM218AQ96MZ4 157 aa10.85□□□□□ -0.67
SMPD1-204ENST00000530395 SPATA45Q537H7 98 aa10.84□□□□□ -0.67
SMPD1-204ENST00000530395 PAM16Q9Y3D7 125 aa10.84□□□□□ -0.67
SMPD1-204ENST00000530395 A0A087WSZ3 146 aa10.83□□□□□ -0.68
SMPD1-204ENST00000530395 C20orf166-AS1Q96NR2 134 aa10.82□□□□□ -0.68
SMPD1-204ENST00000530395 A0A1B0GX51 115 aa10.81□□□□□ -0.68
SMPD1-204ENST00000530395 H3BMG7 143 aa10.81□□□□□ -0.68
SMPD1-204ENST00000530395 TMEM238LA0A1B0GVL6 79 aa10.8□□□□□ -0.68
SMPD1-204ENST00000530395 A6NJY4 79 aa10.8□□□□□ -0.68
SMPD1-204ENST00000530395 FABP2P12104 132 aa10.8□□□□□ -0.68
SMPD1-204ENST00000530395 VAMP8Q9BV40 100 aa10.8□□□□□ -0.68
SMPD1-204ENST00000530395 A8MUU9 505 aa10.79□□□□□ -0.68
SMPD1-204ENST00000530395 C2orf91Q6ZV80 131 aa10.79□□□□□ -0.68
SMPD1-204ENST00000530395 CEND1Q8N111 149 aa10.78□□□□□ -0.68
SMPD1-204ENST00000530395 PRO1854Q9UHT4 67 aa10.78□□□□□ -0.68
SMPD1-204ENST00000530395 TRBV20-1A0A075B6N2 111 aa10.74□□□□□ -0.69
SMPD1-204ENST00000530395 SIGMAR1Q99720 223 aa10.74□□□□□ -0.69
SMPD1-204ENST00000530395 DSCR10P59022 87 aa10.72□□□□□ -0.69
SMPD1-204ENST00000530395 A0A1W2PNM2 257 aa10.7□□□□□ -0.7
SMPD1-204ENST00000530395 TRIAP1O43715 76 aa10.7□□□□□ -0.7
SMPD1-204ENST00000530395 DNAL4O96015 105 aa10.7□□□□□ -0.7
SMPD1-204ENST00000530395 FXYD2P54710 66 aa10.69□□□□□ -0.7
SMPD1-204ENST00000530395 H3BQ85 93 aa10.68□□□□□ -0.7
SMPD1-204ENST00000530395 ANKRD29Q8N6D5 301 aa10.68□□□□□ -0.7
SMPD1-204ENST00000530395 ORMDL1Q9P0S3 153 aa10.67□□□□□ -0.7
SMPD1-204ENST00000530395 TRBV7-4A0A0J9YYF1 115 aa10.66□□□□□ -0.7
SMPD1-204ENST00000530395 LINC00313P59037 77 aa10.66□□□□□ -0.7
SMPD1-204ENST00000530395 IGKV4-1P06312 121 aa10.65□□□□□ -0.7
SMPD1-204ENST00000530395 PSMB2P49721 201 aa10.64□□□□□ -0.71
SMPD1-204ENST00000530395 A0A1B0GV72 72 aa10.63□□□□□ -0.71
SMPD1-204ENST00000530395 TMEM256-PLSCR3K7ERE1 68 aa10.61□□□□□ -0.71
SMPD1-204ENST00000530395 COX6CP09669 75 aa10.61□□□□□ -0.71
SMPD1-204ENST00000530395 HSD52Q0P140 79 aa10.6□□□□□ -0.71
SMPD1-204ENST00000530395 FAM236DA0A1B0GTK5 79 aa10.58□□□□□ -0.72
SMPD1-204ENST00000530395 KRTAP16-1A8MUX0 517 aa10.58□□□□□ -0.72
SMPD1-204ENST00000530395 TRACP01848 142 aa10.58□□□□□ -0.72
SMPD1-204ENST00000530395 FAM236CP0DP71 79 aa10.58□□□□□ -0.72
SMPD1-204ENST00000530395 K7ERJ3 54 aa10.57□□□□□ -0.72
SMPD1-204ENST00000530395 CCKP06307 115 aa10.57□□□□□ -0.72
SMPD1-204ENST00000530395 KRTAP9-8Q9BYQ0 159 aa10.56□□□□□ -0.72
SMPD1-204ENST00000530395 LINC00472Q9H8W2 130 aa10.55□□□□□ -0.72
SMPD1-204ENST00000530395 DEFB116Q30KQ4 102 aa10.54□□□□□ -0.72
SMPD1-204ENST00000530395 IGHV6-1A0A0B4J1U7 121 aa10.53□□□□□ -0.72
SMPD1-204ENST00000530395 UBE2V1Q13404 147 aa10.53□□□□□ -0.72
SMPD1-204ENST00000530395 RBM12B-AS1Q9P1G2 102 aa10.53□□□□□ -0.72
SMPD1-204ENST00000530395 NOTCH2NLQ7Z3S9 236 aa10.52□□□□□ -0.73
SMPD1-204ENST00000530395 PYY3Q5JQD4 70 aa10.49□□□□□ -0.73
SMPD1-204ENST00000530395 USH2AO75445 5202 aa10.48□□□□□ -0.73
SMPD1-204ENST00000530395 VPS25Q9BRG1 176 aa10.48□□□□□ -0.73
SMPD1-204ENST00000530395 C8orf87E5RJ46 101 aa10.46□□□□□ -0.73
SMPD1-204ENST00000530395 HRES1P13985 223 aa10.46□□□□□ -0.73
SMPD1-204ENST00000530395 RBM3P98179 157 aaKnown RBP10.45□□□□□ -0.74
SMPD1-204ENST00000530395 MPLKIPQ8TAP9 179 aa10.45□□□□□ -0.74
SMPD1-204ENST00000530395 A0A1B0GVX0 72 aa10.44□□□□□ -0.74
SMPD1-204ENST00000530395 DSCR8Q96T75 97 aa10.44□□□□□ -0.74
SMPD1-204ENST00000530395 UQCR10Q9UDW1 63 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms