RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 ZFHX4Q86UP3 3567 aa1.65□□□□□ -2.15
CASP4-208ENST00000530309 NCOR1O75376 2440 aa1.65□□□□□ -2.15
CASP4-208ENST00000530309 IGLV5-48A0A075B6I7 105 aa1.65□□□□□ -2.15
CASP4-208ENST00000530309 COX7BP24311 80 aa1.65□□□□□ -2.15
CASP4-208ENST00000530309 COX17Q14061 63 aa1.65□□□□□ -2.15
CASP4-208ENST00000530309 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.65□□□□□ -2.15
CASP4-208ENST00000530309 LINC00269Q8N2A0 174 aa1.65□□□□□ -2.15
CASP4-208ENST00000530309 KCNQ1DNQ9H478 68 aa1.65□□□□□ -2.15
CASP4-208ENST00000530309 CDC42SE1Q9NRR8 79 aa1.65□□□□□ -2.15
CASP4-208ENST00000530309 MGAQ8IWI9 3026 aa1.65□□□□□ -2.15
CASP4-208ENST00000530309 TENM1Q9UKZ4 2725 aa1.65□□□□□ -2.15
CASP4-208ENST00000530309 CEP250Q9BV73 2442 aa1.65□□□□□ -2.15
CASP4-208ENST00000530309 PIEZO2Q9H5I5 2752 aa1.64□□□□□ -2.15
CASP4-208ENST00000530309 AKAP9Q99996 3911 aa1.64□□□□□ -2.15
CASP4-208ENST00000530309 ZDBF2Q9HCK1 2354 aa1.64□□□□□ -2.15
CASP4-208ENST00000530309 NBPF19A0A087WUL8 3843 aa1.64□□□□□ -2.15
CASP4-208ENST00000530309 GVQW2A0A096LPI5 108 aaPredicted RBP1.64□□□□□ -2.15
CASP4-208ENST00000530309 FAM74A4Q5TZK3 123 aa1.64□□□□□ -2.15
CASP4-208ENST00000530309 Q8IZM0 81 aa1.64□□□□□ -2.15
CASP4-208ENST00000530309 LINC01558Q9Y6Z2 57 aa1.64□□□□□ -2.15
CASP4-208ENST00000530309 DMXL2Q8TDJ6 3036 aa1.64□□□□□ -2.15
CASP4-208ENST00000530309 ADGRG4Q8IZF6 3080 aa1.63□□□□□ -2.15
CASP4-208ENST00000530309 RIF1Q5UIP0 2472 aaKnown RBP1.63□□□□□ -2.15
CASP4-208ENST00000530309 WDFY4Q6ZS81 3184 aa1.63□□□□□ -2.15
CASP4-208ENST00000530309 ETDCA0A1B0GVM5 59 aa1.63□□□□□ -2.15
CASP4-208ENST00000530309 HCG22E2RYF7 251 aa1.63□□□□□ -2.15
CASP4-208ENST00000530309 HAMPP81172 84 aa1.63□□□□□ -2.15
CASP4-208ENST00000530309 DEFB112Q30KQ8 113 aa1.63□□□□□ -2.15
CASP4-208ENST00000530309 FDCSPQ8NFU4 85 aa1.63□□□□□ -2.15
CASP4-208ENST00000530309 SPRR4Q96PI1 79 aa1.63□□□□□ -2.15
CASP4-208ENST00000530309 EP300Q09472 2414 aaPredicted RBP1.63□□□□□ -2.15
CASP4-208ENST00000530309 SPTAN1Q13813 2472 aaKnown RBP1.62□□□□□ -2.15
CASP4-208ENST00000530309 FCGBPQ9Y6R7 5405 aaPredicted RBP1.62□□□□□ -2.15
CASP4-208ENST00000530309 LINC00959A0A1B0GUT2 108 aa1.62□□□□□ -2.15
CASP4-208ENST00000530309 LYNX1G3V0Z9 82 aa1.62□□□□□ -2.15
CASP4-208ENST00000530309 LINC00158P58513 81 aa1.62□□□□□ -2.15
CASP4-208ENST00000530309 SPINK13Q1W4C9 94 aa1.62□□□□□ -2.15
CASP4-208ENST00000530309 Q6ZQY7 126 aa1.62□□□□□ -2.15
CASP4-208ENST00000530309 BSNQ9UPA5 3926 aa1.62□□□□□ -2.15
CASP4-208ENST00000530309 DCHS2Q6V1P9 2916 aa1.62□□□□□ -2.15
CASP4-208ENST00000530309 TLN1Q9Y490 2541 aaKnown RBP1.62□□□□□ -2.15
CASP4-208ENST00000530309 AKAP6Q13023 2319 aa1.61□□□□□ -2.15
CASP4-208ENST00000530309 ANKRD11Q6UB99 2663 aaPredicted RBP1.61□□□□□ -2.15
CASP4-208ENST00000530309 MED13LQ71F56 2210 aa1.61□□□□□ -2.15
CASP4-208ENST00000530309 NDUFB1O75438 58 aa1.61□□□□□ -2.15
CASP4-208ENST00000530309 C9orf116Q5BN46 136 aaPredicted RBP1.61□□□□□ -2.15
CASP4-208ENST00000530309 TECTAO75443 2155 aa1.61□□□□□ -2.15
CASP4-208ENST00000530309 CSMD1Q96PZ7 3565 aa1.6□□□□□ -2.15
CASP4-208ENST00000530309 APC2O95996 2303 aa1.6□□□□□ -2.15
CASP4-208ENST00000530309 HRNRQ86YZ3 2850 aaPredicted RBP1.6□□□□□ -2.15
CASP4-208ENST00000530309 DCHS1Q96JQ0 3298 aa1.6□□□□□ -2.15
CASP4-208ENST00000530309 LINC01554Q52M75 96 aa1.6□□□□□ -2.15
CASP4-208ENST00000530309 ANKRD17O75179 2603 aaKnown RBP1.6□□□□□ -2.15
CASP4-208ENST00000530309 MAP1AP78559 2803 aaPredicted RBP1.6□□□□□ -2.15
CASP4-208ENST00000530309 COL6A6A6NMZ7 2263 aa1.6□□□□□ -2.15
CASP4-208ENST00000530309 SVEP1Q4LDE5 3571 aa1.59□□□□□ -2.15
CASP4-208ENST00000530309 CHKB-CPT1BH3BT56 60 aa1.59□□□□□ -2.15
CASP4-208ENST00000530309 KRTAP26-1Q6PEX3 210 aa1.59□□□□□ -2.15
CASP4-208ENST00000530309 LINC00208Q96KT6 92 aa1.59□□□□□ -2.15
CASP4-208ENST00000530309 LOC400499M0QZD8 3231 aa1.59□□□□□ -2.16
CASP4-208ENST00000530309 ITPR1Q14643 2758 aa1.59□□□□□ -2.16
CASP4-208ENST00000530309 SPRR1AP35321 89 aa1.58□□□□□ -2.16
CASP4-208ENST00000530309 SPINK7P58062 85 aa1.58□□□□□ -2.16
CASP4-208ENST00000530309 PRR15LQ9BU68 103 aa1.58□□□□□ -2.16
CASP4-208ENST00000530309 PTPRZ1P23471 2315 aaPredicted RBP1.58□□□□□ -2.16
CASP4-208ENST00000530309 ASH1LQ9NR48 2969 aaKnown RBP1.58□□□□□ -2.16
CASP4-208ENST00000530309 CHD6Q8TD26 2715 aa1.58□□□□□ -2.16
CASP4-208ENST00000530309 ANK3Q12955 4377 aaKnown RBP1.58□□□□□ -2.16
CASP4-208ENST00000530309 LAMA5O15230 3695 aa1.58□□□□□ -2.16
CASP4-208ENST00000530309 RELNP78509 3460 aa1.57□□□□□ -2.16
CASP4-208ENST00000530309 K7EQZ3 153 aa1.57□□□□□ -2.16
CASP4-208ENST00000530309 DEFB131AP59861 70 aa1.57□□□□□ -2.16
CASP4-208ENST00000530309 SPATA8Q6RVD6 105 aa1.57□□□□□ -2.16
CASP4-208ENST00000530309 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.57□□□□□ -2.16
CASP4-208ENST00000530309 SETXQ7Z333 2677 aaKnown RBP1.57□□□□□ -2.16
CASP4-208ENST00000530309 GVINP1Q7Z2Y8 2422 aa1.57□□□□□ -2.16
CASP4-208ENST00000530309 MYO9AB2RTY4 2548 aa1.57□□□□□ -2.16
CASP4-208ENST00000530309 ZFYVE26Q68DK2 2539 aa1.57□□□□□ -2.16
CASP4-208ENST00000530309 NF1P21359 2839 aa1.56□□□□□ -2.16
CASP4-208ENST00000530309 NIPBLQ6KC79 2804 aaeCLIP1.56□□□□□ -2.16
CASP4-208ENST00000530309 ABCA2Q9BZC7 2435 aa1.56□□□□□ -2.16
CASP4-208ENST00000530309 JMJD1CQ15652 2540 aa1.56□□□□□ -2.16
CASP4-208ENST00000530309 IGLV1-51P01701 117 aa1.56□□□□□ -2.16
CASP4-208ENST00000530309 DEFB109BQ30KR1 87 aa1.56□□□□□ -2.16
CASP4-208ENST00000530309 CLPSL2Q6UWE3 100 aa1.56□□□□□ -2.16
CASP4-208ENST00000530309 TOMM7Q9P0U1 55 aa1.56□□□□□ -2.16
CASP4-208ENST00000530309 BDP1A6H8Y1 2624 aa1.56□□□□□ -2.16
CASP4-208ENST00000530309 NBASA2RRP1 2371 aa1.56□□□□□ -2.16
CASP4-208ENST00000530309 SPG11Q96JI7 2443 aa1.56□□□□□ -2.16
CASP4-208ENST00000530309 DMXL1Q9Y485 3027 aa1.56□□□□□ -2.16
CASP4-208ENST00000530309 BOD1L1Q8NFC6 3051 aa1.55□□□□□ -2.16
CASP4-208ENST00000530309 DNAH17Q9UFH2 4485 aa1.55□□□□□ -2.16
CASP4-208ENST00000530309 ASPMQ8IZT6 3477 aa1.55□□□□□ -2.16
CASP4-208ENST00000530309 CELSR1Q9NYQ6 3014 aa1.55□□□□□ -2.16
CASP4-208ENST00000530309 DEFB131BA0A096LNP1 70 aa1.55□□□□□ -2.16
CASP4-208ENST00000530309 TRGV1A0A0A0MS02 117 aa1.55□□□□□ -2.16
CASP4-208ENST00000530309 C10orf99Q6UWK7 81 aa1.55□□□□□ -2.16
CASP4-208ENST00000530309 SPTSSBQ8NFR3 76 aa1.55□□□□□ -2.16
CASP4-208ENST00000530309 PRO3102Q9H379 93 aa1.55□□□□□ -2.16
CASP4-208ENST00000530309 LINC00472Q9H8W2 130 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms