RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 C2CD3Q4AC94 2353 aa2.37□□□□□ -2.03
USP47-209ENST00000530041 BOD1L1Q8NFC6 3051 aa2.37□□□□□ -2.03
USP47-209ENST00000530041 IGLV10-54A0A075B6I4 117 aa2.37□□□□□ -2.03
USP47-209ENST00000530041 IGLV5-48A0A075B6I7 105 aa2.37□□□□□ -2.03
USP47-209ENST00000530041 A0A096LPF7 62 aa2.37□□□□□ -2.03
USP47-209ENST00000530041 FUSP35637 526 aaKnown RBP eCLIP2.37□□□□□ -2.03
USP47-209ENST00000530041 ZCCHC13Q8WW36 166 aaKnown RBP2.37□□□□□ -2.03
USP47-209ENST00000530041 TACC2O95359 2948 aa2.37□□□□□ -2.03
USP47-209ENST00000530041 ESRGQ1W209 222 aa2.36□□□□□ -2.03
USP47-209ENST00000530041 Q8NAQ8 132 aa2.36□□□□□ -2.03
USP47-209ENST00000530041 KCNQ1DNQ9H478 68 aa2.36□□□□□ -2.03
USP47-209ENST00000530041 SPG11Q96JI7 2443 aa2.36□□□□□ -2.03
USP47-209ENST00000530041 LRBAP50851 2863 aa2.35□□□□□ -2.03
USP47-209ENST00000530041 IGF2RP11717 2491 aa2.35□□□□□ -2.03
USP47-209ENST00000530041 DOPEY1Q5JWR5 2465 aa2.35□□□□□ -2.03
USP47-209ENST00000530041 A0A1B0GU33 70 aa2.35□□□□□ -2.03
USP47-209ENST00000530041 hDV103S1A0JD37 113 aa2.35□□□□□ -2.03
USP47-209ENST00000530041 SPINT4Q6UDR6 99 aa2.35□□□□□ -2.03
USP47-209ENST00000530041 CYP4F30PQ9H0H9 118 aa2.35□□□□□ -2.03
USP47-209ENST00000530041 ATMQ13315 3056 aa2.35□□□□□ -2.03
USP47-209ENST00000530041 A0A1W2PNM2 257 aa2.34□□□□□ -2.03
USP47-209ENST00000530041 H3BNG1 76 aa2.34□□□□□ -2.03
USP47-209ENST00000530041 SPART-AS1P0CW21 52 aa2.34□□□□□ -2.03
USP47-209ENST00000530041 SPRR1AP35321 89 aa2.34□□□□□ -2.03
USP47-209ENST00000530041 Q1T7F1 81 aa2.34□□□□□ -2.03
USP47-209ENST00000530041 KRTAP25-1Q3LHN0 102 aa2.34□□□□□ -2.03
USP47-209ENST00000530041 LINC01554Q52M75 96 aa2.34□□□□□ -2.03
USP47-209ENST00000530041 C1orf64Q8NEQ6 169 aa2.34□□□□□ -2.03
USP47-209ENST00000530041 WFDC11Q8NEX6 87 aa2.34□□□□□ -2.03
USP47-209ENST00000530041 SPRR4Q96PI1 79 aa2.34□□□□□ -2.03
USP47-209ENST00000530041 HIGD2AQ9BW72 106 aa2.34□□□□□ -2.03
USP47-209ENST00000530041 WNK1Q9H4A3 2382 aa2.34□□□□□ -2.04
USP47-209ENST00000530041 DMXL1Q9Y485 3027 aa2.34□□□□□ -2.04
USP47-209ENST00000530041 MUC3AQ02505 3323 aa2.33□□□□□ -2.04
USP47-209ENST00000530041 ETDCA0A1B0GVM5 59 aa2.33□□□□□ -2.04
USP47-209ENST00000530041 H3BPC8 53 aa2.32□□□□□ -2.04
USP47-209ENST00000530041 DEFB4AO15263 64 aa2.32□□□□□ -2.04
USP47-209ENST00000530041 DEFB135Q30KP9 77 aa2.32□□□□□ -2.04
USP47-209ENST00000530041 PRR15Q8IV56 129 aa2.32□□□□□ -2.04
USP47-209ENST00000530041 BRK1Q8WUW1 75 aa2.32□□□□□ -2.04
USP47-209ENST00000530041 ASPMQ8IZT6 3477 aa2.32□□□□□ -2.04
USP47-209ENST00000530041 CEP295Q9C0D2 2601 aa2.32□□□□□ -2.04
USP47-209ENST00000530041 C3orf84H3BNL1 204 aa2.31□□□□□ -2.04
USP47-209ENST00000530041 UBE2BP63146 152 aa2.31□□□□□ -2.04
USP47-209ENST00000530041 LINC01556Q5JQF7 62 aa2.31□□□□□ -2.04
USP47-209ENST00000530041 Q6ZRX8 168 aa2.31□□□□□ -2.04
USP47-209ENST00000530041 Q9BRP9 147 aa2.31□□□□□ -2.04
USP47-209ENST00000530041 USP9YO00507 2555 aaPredicted RBP2.31□□□□□ -2.04
USP47-209ENST00000530041 USP9XQ93008 2570 aaPredicted RBP2.3□□□□□ -2.04
USP47-209ENST00000530041 HTN3P15516 51 aa2.3□□□□□ -2.04
USP47-209ENST00000530041 C1orf137Q5JT78 98 aa2.3□□□□□ -2.04
USP47-209ENST00000530041 WFDC10BQ8IUB3 73 aa2.3□□□□□ -2.04
USP47-209ENST00000530041 R4GN34 69 aa2.3□□□□□ -2.04
USP47-209ENST00000530041 TRAV22A0A0B4J277 110 aa2.29□□□□□ -2.04
USP47-209ENST00000530041 HCG22E2RYF7 251 aa2.29□□□□□ -2.04
USP47-209ENST00000530041 K7EQZ3 153 aa2.29□□□□□ -2.04
USP47-209ENST00000530041 PSCAO43653 123 aa2.29□□□□□ -2.04
USP47-209ENST00000530041 NDUFB1O75438 58 aa2.29□□□□□ -2.04
USP47-209ENST00000530041 PRB1P04280 392 aa2.29□□□□□ -2.04
USP47-209ENST00000530041 DEFB105AQ8NG35 78 aa2.29□□□□□ -2.04
USP47-209ENST00000530041 FN1P02751 2386 aaKnown RBP2.28□□□□□ -2.04
USP47-209ENST00000530041 CELSR1Q9NYQ6 3014 aa2.28□□□□□ -2.04
USP47-209ENST00000530041 ANKRD17O75179 2603 aaKnown RBP2.28□□□□□ -2.04
USP47-209ENST00000530041 TLN2Q9Y4G6 2542 aa2.28□□□□□ -2.04
USP47-209ENST00000530041 RELNP78509 3460 aa2.27□□□□□ -2.05
USP47-209ENST00000530041 SPRR1BP22528 89 aa2.27□□□□□ -2.05
USP47-209ENST00000530041 KRTAP13-2Q52LG2 175 aa2.27□□□□□ -2.05
USP47-209ENST00000530041 ZFHX3Q15911 3703 aa2.27□□□□□ -2.05
USP47-209ENST00000530041 LAMA5O15230 3695 aa2.27□□□□□ -2.05
USP47-209ENST00000530041 PTPN13Q12923 2485 aa2.27□□□□□ -2.05
USP47-209ENST00000530041 MYO9AB2RTY4 2548 aa2.26□□□□□ -2.05
USP47-209ENST00000530041 JMJD1CQ15652 2540 aa2.26□□□□□ -2.05
USP47-209ENST00000530041 PKD1L2Q7Z442 2459 aa2.26□□□□□ -2.05
USP47-209ENST00000530041 NAV2Q8IVL1 2488 aa2.26□□□□□ -2.05
USP47-209ENST00000530041 Q5VV11 94 aa2.26□□□□□ -2.05
USP47-209ENST00000530041 C9orf163Q8N9P6 203 aa2.26□□□□□ -2.05
USP47-209ENST00000530041 LIMD2Q9BT23 127 aa2.26□□□□□ -2.05
USP47-209ENST00000530041 ASH1LQ9NR48 2969 aaKnown RBP2.26□□□□□ -2.05
USP47-209ENST00000530041 ACACBO00763 2458 aa2.26□□□□□ -2.05
USP47-209ENST00000530041 NCOR2Q9Y618 2525 aa2.25□□□□□ -2.05
USP47-209ENST00000530041 SVEP1Q4LDE5 3571 aa2.25□□□□□ -2.05
USP47-209ENST00000530041 LOC101927531A0A1B0GV80 90 aa2.25□□□□□ -2.05
USP47-209ENST00000530041 HRES1P13985 223 aa2.25□□□□□ -2.05
USP47-209ENST00000530041 CNBPP62633 177 aaKnown RBP2.25□□□□□ -2.05
USP47-209ENST00000530041 ANK3Q12955 4377 aaKnown RBP2.25□□□□□ -2.05
USP47-209ENST00000530041 FBN2P35556 2912 aa2.25□□□□□ -2.05
USP47-209ENST00000530041 DEFB131BA0A096LNP1 70 aa2.24□□□□□ -2.05
USP47-209ENST00000530041 H0Y9P7 68 aa2.24□□□□□ -2.05
USP47-209ENST00000530041 ASB16-AS1Q495Z4 193 aa2.24□□□□□ -2.05
USP47-209ENST00000530041 WFDC13Q8IUB5 93 aa2.24□□□□□ -2.05
USP47-209ENST00000530041 LINC00208Q96KT6 92 aa2.24□□□□□ -2.05
USP47-209ENST00000530041 LINC00472Q9H8W2 130 aa2.24□□□□□ -2.05
USP47-209ENST00000530041 PLAC8Q9NZF1 115 aa2.24□□□□□ -2.05
USP47-209ENST00000530041 SONP18583 2426 aaKnown RBP2.24□□□□□ -2.05
USP47-209ENST00000530041 POLQO75417 2590 aa2.23□□□□□ -2.05
USP47-209ENST00000530041 CHD6Q8TD26 2715 aa2.23□□□□□ -2.05
USP47-209ENST00000530041 SETXQ7Z333 2677 aaKnown RBP2.23□□□□□ -2.05
USP47-209ENST00000530041 A0A087WSZ3 146 aa2.23□□□□□ -2.05
USP47-209ENST00000530041 CASC2Q6XLA1 102 aa2.23□□□□□ -2.05
USP47-209ENST00000530041 LINC01558Q9Y6Z2 57 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms