RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 PLAC4Q8WY50 150 aa5.1□□□□□ -1.59
CTNND1-219ENST00000528621 LCE6AA0A183 80 aa5.09□□□□□ -1.59
CTNND1-219ENST00000528621 MKI67P46013 3256 aaKnown RBP5.08□□□□□ -1.6
CTNND1-219ENST00000528621 SPINK7P58062 85 aa5.08□□□□□ -1.6
CTNND1-219ENST00000528621 KRTAP10-1P60331 282 aa5.08□□□□□ -1.6
CTNND1-219ENST00000528621 Q5VV11 94 aa5.07□□□□□ -1.6
CTNND1-219ENST00000528621 Q6ZR54 194 aa5.06□□□□□ -1.6
CTNND1-219ENST00000528621 LAMA2P24043 3122 aaKnown RBP5.06□□□□□ -1.6
CTNND1-219ENST00000528621 KRTAP10-2P60368 255 aa5.05□□□□□ -1.6
CTNND1-219ENST00000528621 A0A0A0MQY5 61 aa5.05□□□□□ -1.6
CTNND1-219ENST00000528621 KRTAP4-16G5E9R7 235 aaPredicted RBP5.05□□□□□ -1.6
CTNND1-219ENST00000528621 F8P00451 2351 aa5.05□□□□□ -1.6
CTNND1-219ENST00000528621 R4GN34 69 aa5.04□□□□□ -1.6
CTNND1-219ENST00000528621 RPS29P62273 56 aaKnown RBP5.03□□□□□ -1.6
CTNND1-219ENST00000528621 RANBP2P49792 3224 aaKnown RBP5.02□□□□□ -1.61
CTNND1-219ENST00000528621 ASB16-AS1Q495Z4 193 aa5.02□□□□□ -1.61
CTNND1-219ENST00000528621 H1FX-AS1Q4G0G2 97 aa5.01□□□□□ -1.61
CTNND1-219ENST00000528621 BRCA2P51587 3418 aa5.01□□□□□ -1.61
CTNND1-219ENST00000528621 EPG5Q9HCE0 2579 aa5□□□□□ -1.61
CTNND1-219ENST00000528621 ROMO1P60602 79 aa4.99□□□□□ -1.61
CTNND1-219ENST00000528621 KRTAP29-1A8MX34 341 aaPredicted RBP4.99□□□□□ -1.61
CTNND1-219ENST00000528621 RPL37P61927 97 aaKnown RBP4.99□□□□□ -1.61
CTNND1-219ENST00000528621 LAMA3Q16787 3333 aa4.99□□□□□ -1.61
CTNND1-219ENST00000528621 UNC80Q8N2C7 3258 aa4.99□□□□□ -1.61
CTNND1-219ENST00000528621 PRAC1Q96KF2 57 aa4.98□□□□□ -1.61
CTNND1-219ENST00000528621 PANO1I0J062 215 aa4.96□□□□□ -1.61
CTNND1-219ENST00000528621 TRANK1O15050 2925 aa4.96□□□□□ -1.61
CTNND1-219ENST00000528621 M0QZ58 72 aa4.96□□□□□ -1.62
CTNND1-219ENST00000528621 ADM2Q7Z4H4 148 aa4.95□□□□□ -1.62
CTNND1-219ENST00000528621 TRIOO75962 3097 aa4.94□□□□□ -1.62
CTNND1-219ENST00000528621 FASNP49327 2511 aaKnown RBP4.94□□□□□ -1.62
CTNND1-219ENST00000528621 A0A087X002 238 aa4.91□□□□□ -1.62
CTNND1-219ENST00000528621 MGAQ8IWI9 3026 aa4.9□□□□□ -1.63
CTNND1-219ENST00000528621 Q6ZRN7 208 aaPredicted RBP4.89□□□□□ -1.63
CTNND1-219ENST00000528621 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
CTNND1-219ENST00000528621 DNAH14Q0VDD8 3507 aa4.88□□□□□ -1.63
CTNND1-219ENST00000528621 XIRP2A4UGR9 3374 aa4.87□□□□□ -1.63
CTNND1-219ENST00000528621 FLNAP21333 2647 aaKnown RBP4.86□□□□□ -1.63
CTNND1-219ENST00000528621 WDFY4Q6ZS81 3184 aa4.86□□□□□ -1.63
CTNND1-219ENST00000528621 CDH23Q9H251 3354 aa4.86□□□□□ -1.63
CTNND1-219ENST00000528621 USP24Q9UPU5 2620 aa4.86□□□□□ -1.63
CTNND1-219ENST00000528621 H3BS24 57 aa4.86□□□□□ -1.63
CTNND1-219ENST00000528621 KRTAP11-1Q8IUC1 163 aa4.85□□□□□ -1.63
CTNND1-219ENST00000528621 FREM2Q5SZK8 3169 aa4.85□□□□□ -1.63
CTNND1-219ENST00000528621 KRTAP13-1Q8IUC0 172 aa4.85□□□□□ -1.63
CTNND1-219ENST00000528621 PRUNE2Q8WUY3 3088 aa4.84□□□□□ -1.63
CTNND1-219ENST00000528621 NOTCH2NLQ7Z3S9 236 aa4.84□□□□□ -1.63
CTNND1-219ENST00000528621 VPS13AQ96RL7 3174 aa4.84□□□□□ -1.63
CTNND1-219ENST00000528621 FRYQ5TBA9 3013 aa4.84□□□□□ -1.63
CTNND1-219ENST00000528621 NBEAQ8NFP9 2946 aa4.84□□□□□ -1.63
CTNND1-219ENST00000528621 CELSR3Q9NYQ7 3312 aa4.83□□□□□ -1.64
CTNND1-219ENST00000528621 KRTAP21-3Q3LHN1 58 aa4.83□□□□□ -1.64
CTNND1-219ENST00000528621 CENPEQ02224 2701 aa4.82□□□□□ -1.64
CTNND1-219ENST00000528621 DSPP15924 2871 aaKnown RBP4.82□□□□□ -1.64
CTNND1-219ENST00000528621 KRTAP7-1Q8IUC3 87 aa4.82□□□□□ -1.64
CTNND1-219ENST00000528621 HECTD1Q9ULT8 2610 aa4.82□□□□□ -1.64
CTNND1-219ENST00000528621 ITPR3Q14573 2671 aa4.81□□□□□ -1.64
CTNND1-219ENST00000528621 VCANP13611 3396 aa4.8□□□□□ -1.64
CTNND1-219ENST00000528621 ATRQ13535 2644 aa4.79□□□□□ -1.64
CTNND1-219ENST00000528621 CHD6Q8TD26 2715 aa4.79□□□□□ -1.64
CTNND1-219ENST00000528621 MGAM2Q2M2H8 2515 aa4.79□□□□□ -1.64
CTNND1-219ENST00000528621 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
CTNND1-219ENST00000528621 GCN1Q92616 2671 aaKnown RBP4.78□□□□□ -1.64
CTNND1-219ENST00000528621 LAMA1P25391 3075 aa4.78□□□□□ -1.64
CTNND1-219ENST00000528621 AKAP13Q12802 2813 aa4.77□□□□□ -1.65
CTNND1-219ENST00000528621 A8MUU9 505 aa4.77□□□□□ -1.65
CTNND1-219ENST00000528621 MAP1AP78559 2803 aaPredicted RBP4.75□□□□□ -1.65
CTNND1-219ENST00000528621 KALRNO60229 2985 aa4.75□□□□□ -1.65
CTNND1-219ENST00000528621 A6NN06 94 aa4.74□□□□□ -1.65
CTNND1-219ENST00000528621 FLNBO75369 2602 aaKnown RBP4.74□□□□□ -1.65
CTNND1-219ENST00000528621 A8MU10 97 aa4.74□□□□□ -1.65
CTNND1-219ENST00000528621 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
CTNND1-219ENST00000528621 NBEAL2Q6ZNJ1 2754 aa4.73□□□□□ -1.65
CTNND1-219ENST00000528621 UNC79Q9P2D8 2635 aa4.73□□□□□ -1.65
CTNND1-219ENST00000528621 SZT2Q5T011 3432 aa4.72□□□□□ -1.65
CTNND1-219ENST00000528621 ZNF292O60281 2723 aa4.71□□□□□ -1.66
CTNND1-219ENST00000528621 C20orf166-AS1Q96NR2 134 aa4.7□□□□□ -1.66
CTNND1-219ENST00000528621 FRYLO94915 3013 aa4.68□□□□□ -1.66
CTNND1-219ENST00000528621 CFAP46Q8IYW2 2715 aa4.67□□□□□ -1.66
CTNND1-219ENST00000528621 MAST4O15021 2626 aa4.67□□□□□ -1.66
CTNND1-219ENST00000528621 KRTAP16-1A8MUX0 517 aa4.65□□□□□ -1.66
CTNND1-219ENST00000528621 SPEGQ15772 3267 aa4.64□□□□□ -1.67
CTNND1-219ENST00000528621 ADGRG4Q8IZF6 3080 aa4.64□□□□□ -1.67
CTNND1-219ENST00000528621 COL6A3P12111 3177 aa4.63□□□□□ -1.67
CTNND1-219ENST00000528621 BOD1L1Q8NFC6 3051 aa4.63□□□□□ -1.67
CTNND1-219ENST00000528621 LRBAP50851 2863 aa4.63□□□□□ -1.67
CTNND1-219ENST00000528621 TNP1P09430 55 aa4.61□□□□□ -1.67
CTNND1-219ENST00000528621 HELZ2Q9BYK8 2649 aaKnown RBP4.61□□□□□ -1.67
CTNND1-219ENST00000528621 NBEAL1Q6ZS30 2694 aa4.6□□□□□ -1.67
CTNND1-219ENST00000528621 TEX15Q9BXT5 2789 aa4.6□□□□□ -1.67
CTNND1-219ENST00000528621 TACC2O95359 2948 aa4.59□□□□□ -1.68
CTNND1-219ENST00000528621 ATMQ13315 3056 aa4.59□□□□□ -1.68
CTNND1-219ENST00000528621 SETXQ7Z333 2677 aaKnown RBP4.58□□□□□ -1.68
CTNND1-219ENST00000528621 NOTCH1P46531 2555 aa4.57□□□□□ -1.68
CTNND1-219ENST00000528621 ITPR1Q14643 2758 aa4.57□□□□□ -1.68
CTNND1-219ENST00000528621 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
CTNND1-219ENST00000528621 ZZEF1O43149 2961 aa4.56□□□□□ -1.68
CTNND1-219ENST00000528621 KRTAP1-4P0C5Y4 121 aa4.56□□□□□ -1.68
CTNND1-219ENST00000528621 BAHCC1Q9P281 2608 aa4.56□□□□□ -1.68
CTNND1-219ENST00000528621 FLG2Q5D862 2391 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 220 ms