RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 K7EQZ3 153 aa11.67□□□□□ -0.54
LTBP3-210ENST00000528516 PRR15LQ9BU68 103 aa11.67□□□□□ -0.54
LTBP3-210ENST00000528516 CIRBP-AS1Q8TBR5 109 aa11.67□□□□□ -0.54
LTBP3-210ENST00000528516 C15orf56Q8N910 161 aa11.66□□□□□ -0.54
LTBP3-210ENST00000528516 Q8N377 158 aa11.65□□□□□ -0.55
LTBP3-210ENST00000528516 PRR34Q9NV39 138 aa11.65□□□□□ -0.55
LTBP3-210ENST00000528516 GVQW2A0A096LPI5 108 aaPredicted RBP11.64□□□□□ -0.55
LTBP3-210ENST00000528516 A6NED7 52 aa11.63□□□□□ -0.55
LTBP3-210ENST00000528516 CASC2Q6XLA1 102 aa11.63□□□□□ -0.55
LTBP3-210ENST00000528516 Q6ZRX8 168 aa11.63□□□□□ -0.55
LTBP3-210ENST00000528516 HCG22E2RYF7 251 aa11.63□□□□□ -0.55
LTBP3-210ENST00000528516 LINC00476Q8WZB0 136 aa11.62□□□□□ -0.55
LTBP3-210ENST00000528516 A0A1W2PNM2 257 aa11.62□□□□□ -0.55
LTBP3-210ENST00000528516 C4orf48Q5BLP8 95 aa11.61□□□□□ -0.55
LTBP3-210ENST00000528516 A8MU10 97 aa11.6□□□□□ -0.55
LTBP3-210ENST00000528516 DNAH10OSP0CZ25 163 aa11.6□□□□□ -0.55
LTBP3-210ENST00000528516 CD164Q04900 197 aa11.6□□□□□ -0.55
LTBP3-210ENST00000528516 PKD1L1Q8TDX9 2849 aa11.59□□□□□ -0.55
LTBP3-210ENST00000528516 TENM3Q9P273 2699 aa11.59□□□□□ -0.55
LTBP3-210ENST00000528516 Q8NBF4 154 aa11.58□□□□□ -0.56
LTBP3-210ENST00000528516 ANK3Q12955 4377 aaKnown RBP11.56□□□□□ -0.56
LTBP3-210ENST00000528516 MDFIQ99750 246 aa11.56□□□□□ -0.56
LTBP3-210ENST00000528516 AKAP9Q99996 3911 aa11.55□□□□□ -0.56
LTBP3-210ENST00000528516 H0Y9P7 68 aa11.55□□□□□ -0.56
LTBP3-210ENST00000528516 DSCR10P59022 87 aa11.54□□□□□ -0.56
LTBP3-210ENST00000528516 IGLV5-48A0A075B6I7 105 aa11.52□□□□□ -0.57
LTBP3-210ENST00000528516 ANAPC11Q9NYG5 84 aa11.51□□□□□ -0.57
LTBP3-210ENST00000528516 K7EIL1 84 aa11.5□□□□□ -0.57
LTBP3-210ENST00000528516 MOBPQ13875 183 aa11.5□□□□□ -0.57
LTBP3-210ENST00000528516 LIMD2Q9BT23 127 aa11.49□□□□□ -0.57
LTBP3-210ENST00000528516 Q5VV11 94 aa11.49□□□□□ -0.57
LTBP3-210ENST00000528516 CYP4F30PQ9H0H9 118 aa11.49□□□□□ -0.57
LTBP3-210ENST00000528516 IGLV5-52A0A0A0MRZ9 124 aa11.48□□□□□ -0.57
LTBP3-210ENST00000528516 H3BNG1 76 aa11.48□□□□□ -0.57
LTBP3-210ENST00000528516 ZCCHC13Q8WW36 166 aaKnown RBP11.47□□□□□ -0.57
LTBP3-210ENST00000528516 KCNQ1DNQ9H478 68 aa11.47□□□□□ -0.57
LTBP3-210ENST00000528516 IGLV1-50A0A075B6I6 118 aa11.46□□□□□ -0.57
LTBP3-210ENST00000528516 KTN1-AS1Q86SY8 53 aa11.46□□□□□ -0.57
LTBP3-210ENST00000528516 TRRAPQ9Y4A5 3859 aa11.45□□□□□ -0.58
LTBP3-210ENST00000528516 A0A1B0GW54 56 aa11.44□□□□□ -0.58
LTBP3-210ENST00000528516 DMBT1Q9UGM3 2413 aaPredicted RBP11.44□□□□□ -0.58
LTBP3-210ENST00000528516 C16orf90A8MZG2 172 aa11.43□□□□□ -0.58
LTBP3-210ENST00000528516 RBM12B-AS1Q9P1G2 102 aa11.43□□□□□ -0.58
LTBP3-210ENST00000528516 LCE6AA0A183 80 aa11.41□□□□□ -0.58
LTBP3-210ENST00000528516 TENM2Q9NT68 2774 aa11.4□□□□□ -0.58
LTBP3-210ENST00000528516 IGFL1Q6UW32 110 aa11.4□□□□□ -0.58
LTBP3-210ENST00000528516 Q8N9P0 234 aaPredicted RBP11.4□□□□□ -0.58
LTBP3-210ENST00000528516 NUPR2A6NF83 97 aa11.4□□□□□ -0.58
LTBP3-210ENST00000528516 SPINK1P00995 79 aa11.4□□□□□ -0.58
LTBP3-210ENST00000528516 SPAG11AQ6PDA7 123 aa11.36□□□□□ -0.59
LTBP3-210ENST00000528516 SPRR4Q96PI1 79 aa11.36□□□□□ -0.59
LTBP3-210ENST00000528516 NBDYA0A0U1RRE5 68 aa11.35□□□□□ -0.59
LTBP3-210ENST00000528516 ATP11AUNQ6ZP68 121 aa11.34□□□□□ -0.59
LTBP3-210ENST00000528516 COA5Q86WW8 74 aa11.34□□□□□ -0.59
LTBP3-210ENST00000528516 C1orf134Q5TEV5 83 aa11.34□□□□□ -0.59
LTBP3-210ENST00000528516 ZNF706Q9Y5V0 76 aaPredicted RBP11.34□□□□□ -0.59
LTBP3-210ENST00000528516 SPACA4Q8TDM5 124 aa11.31□□□□□ -0.6
LTBP3-210ENST00000528516 TNP2Q05952 138 aa11.3□□□□□ -0.6
LTBP3-210ENST00000528516 IGKV2D-30A0A075B6S6 120 aa11.29□□□□□ -0.6
LTBP3-210ENST00000528516 IGKV2-30P06310 120 aa11.29□□□□□ -0.6
LTBP3-210ENST00000528516 LCA10Q71F78 164 aa11.29□□□□□ -0.6
LTBP3-210ENST00000528516 FLG2Q5D862 2391 aaPredicted RBP11.28□□□□□ -0.6
LTBP3-210ENST00000528516 SPANXA2-OT1Q8N9U9 137 aa11.27□□□□□ -0.61
LTBP3-210ENST00000528516 RTL8CO15255 209 aa11.26□□□□□ -0.61
LTBP3-210ENST00000528516 LOC101927531A0A1B0GV80 90 aa11.26□□□□□ -0.61
LTBP3-210ENST00000528516 KRTAP26-1Q6PEX3 210 aa11.24□□□□□ -0.61
LTBP3-210ENST00000528516 H3BPC8 53 aa11.23□□□□□ -0.61
LTBP3-210ENST00000528516 Q75L30 129 aa11.22□□□□□ -0.61
LTBP3-210ENST00000528516 C7orf65Q6ZTY9 151 aa11.2□□□□□ -0.62
LTBP3-210ENST00000528516 CDC42SE1Q9NRR8 79 aa11.2□□□□□ -0.62
LTBP3-210ENST00000528516 IGLV8-61A0A075B6I0 122 aa11.19□□□□□ -0.62
LTBP3-210ENST00000528516 TGP01266 2768 aa11.17□□□□□ -0.62
LTBP3-210ENST00000528516 KRTAP4-16G5E9R7 235 aaPredicted RBP11.17□□□□□ -0.62
LTBP3-210ENST00000528516 KRTAP1-5Q9BYS1 174 aa11.16□□□□□ -0.62
LTBP3-210ENST00000528516 C9orf163Q8N9P6 203 aa11.16□□□□□ -0.62
LTBP3-210ENST00000528516 A8MWP4 228 aa11.16□□□□□ -0.62
LTBP3-210ENST00000528516 CNBPP62633 177 aaKnown RBP11.16□□□□□ -0.62
LTBP3-210ENST00000528516 SRRM2Q9UQ35 2752 aaKnown RBP11.15□□□□□ -0.62
LTBP3-210ENST00000528516 SPRR1AP35321 89 aa11.15□□□□□ -0.62
LTBP3-210ENST00000528516 A6NN06 94 aa11.12□□□□□ -0.63
LTBP3-210ENST00000528516 TLX1NBP0CAT3 122 aa11.12□□□□□ -0.63
LTBP3-210ENST00000528516 KRTAP29-1A8MX34 341 aaPredicted RBP11.12□□□□□ -0.63
LTBP3-210ENST00000528516 PLA2G2DQ9UNK4 145 aa11.11□□□□□ -0.63
LTBP3-210ENST00000528516 SPINK7P58062 85 aa11.1□□□□□ -0.63
LTBP3-210ENST00000528516 PSORS1C2Q9UIG4 136 aa11.1□□□□□ -0.63
LTBP3-210ENST00000528516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.1□□□□□ -0.63
LTBP3-210ENST00000528516 IGLV7-46A0A075B6I9 117 aa11.09□□□□□ -0.63
LTBP3-210ENST00000528516 A0A087WTM6 91 aa11.07□□□□□ -0.64
LTBP3-210ENST00000528516 PRAC1Q96KF2 57 aa11.06□□□□□ -0.64
LTBP3-210ENST00000528516 APLNQ9ULZ1 77 aa11.06□□□□□ -0.64
LTBP3-210ENST00000528516 IGLV5-37A0A075B6J1 123 aa11.05□□□□□ -0.64
LTBP3-210ENST00000528516 KRTAP7-1Q8IUC3 87 aa11.04□□□□□ -0.64
LTBP3-210ENST00000528516 SMR3BP02814 79 aaPredicted RBP11.03□□□□□ -0.64
LTBP3-210ENST00000528516 LINC01558Q9Y6Z2 57 aa11.03□□□□□ -0.64
LTBP3-210ENST00000528516 C8orf17Q9NRJ1 99 aa11.02□□□□□ -0.65
LTBP3-210ENST00000528516 PRR26Q8N8Z3 221 aa10.99□□□□□ -0.65
LTBP3-210ENST00000528516 MRPL34Q9BQ48 92 aaKnown RBP10.99□□□□□ -0.65
LTBP3-210ENST00000528516 MMP24-AS1A0A0U1RRL7 71 aa10.99□□□□□ -0.65
LTBP3-210ENST00000528516 LINC00313P59037 77 aa10.98□□□□□ -0.65
LTBP3-210ENST00000528516 ZNF861PO60384 105 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms