RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 LINC00575Q6W349 94 aa13.69□□□□□ -0.22
TRIM3-206ENST00000528227 COX6B2Q6YFQ2 88 aa13.66□□□□□ -0.22
TRIM3-206ENST00000528227 M0R2T5 61 aa13.65□□□□□ -0.22
TRIM3-206ENST00000528227 Q6ZQY7 126 aa13.65□□□□□ -0.22
TRIM3-206ENST00000528227 Q6JHZ5 121 aa13.64□□□□□ -0.23
TRIM3-206ENST00000528227 hADV29S1A0JD25 119 aa13.63□□□□□ -0.23
TRIM3-206ENST00000528227 CLEC2BQ92478 149 aa13.62□□□□□ -0.23
TRIM3-206ENST00000528227 TRBV7-7A0A0K0K1E9 115 aa13.61□□□□□ -0.23
TRIM3-206ENST00000528227 IGFL1Q6UW32 110 aa13.61□□□□□ -0.23
TRIM3-206ENST00000528227 FLGP20930 4061 aaPredicted RBP13.6□□□□□ -0.23
TRIM3-206ENST00000528227 OCIAD2Q56VL3 154 aa13.57□□□□□ -0.24
TRIM3-206ENST00000528227 HSBP1L1C9JCN9 74 aa13.53□□□□□ -0.24
TRIM3-206ENST00000528227 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.53□□□□□ -0.24
TRIM3-206ENST00000528227 HIST3H2BBQ8N257 126 aa13.53□□□□□ -0.24
TRIM3-206ENST00000528227 OBSCN-AS1Q96MR7 158 aa13.52□□□□□ -0.25
TRIM3-206ENST00000528227 HIST1H2BLQ99880 126 aa13.52□□□□□ -0.25
TRIM3-206ENST00000528227 Q75L30 129 aa13.5□□□□□ -0.25
TRIM3-206ENST00000528227 PPDPFLQ8WWR9 84 aa13.5□□□□□ -0.25
TRIM3-206ENST00000528227 BVES-AS1Q5T3Y7 98 aa13.48□□□□□ -0.25
TRIM3-206ENST00000528227 ATP11AUNQ6ZP68 121 aa13.48□□□□□ -0.25
TRIM3-206ENST00000528227 C12orf57Q99622 126 aa13.48□□□□□ -0.25
TRIM3-206ENST00000528227 S100A2P29034 98 aa13.47□□□□□ -0.25
TRIM3-206ENST00000528227 SNHG12Q9BXW3 62 aa13.46□□□□□ -0.25
TRIM3-206ENST00000528227 H3BUT2 72 aa13.44□□□□□ -0.26
TRIM3-206ENST00000528227 LST1O00453 97 aa13.43□□□□□ -0.26
TRIM3-206ENST00000528227 HIST1H4GQ99525 98 aa13.42□□□□□ -0.26
TRIM3-206ENST00000528227 SCGB1D1O95968 90 aa13.41□□□□□ -0.26
TRIM3-206ENST00000528227 Q6Q795 121 aa13.41□□□□□ -0.26
TRIM3-206ENST00000528227 Q96NJ1 140 aa13.38□□□□□ -0.27
TRIM3-206ENST00000528227 SS18L2Q9UHA2 77 aa13.35□□□□□ -0.27
TRIM3-206ENST00000528227 COX8AP10176 69 aa13.34□□□□□ -0.27
TRIM3-206ENST00000528227 CFC1P0CG37 223 aa13.31□□□□□ -0.28
TRIM3-206ENST00000528227 C20orf166-AS1Q96NR2 134 aa13.31□□□□□ -0.28
TRIM3-206ENST00000528227 S100A6P06703 90 aa13.3□□□□□ -0.28
TRIM3-206ENST00000528227 TEN1Q86WV5 123 aa13.3□□□□□ -0.28
TRIM3-206ENST00000528227 DLEU1O43261 78 aa13.29□□□□□ -0.28
TRIM3-206ENST00000528227 A8MUU9 505 aa13.27□□□□□ -0.29
TRIM3-206ENST00000528227 NDUFV3P56181 108 aaKnown RBP13.27□□□□□ -0.29
TRIM3-206ENST00000528227 RAB37Q96AX2 223 aa13.27□□□□□ -0.29
TRIM3-206ENST00000528227 FAM218AQ96MZ4 157 aa13.27□□□□□ -0.29
TRIM3-206ENST00000528227 H0YGX0 51 aa13.26□□□□□ -0.29
TRIM3-206ENST00000528227 SNCGO76070 127 aa13.26□□□□□ -0.29
TRIM3-206ENST00000528227 A0A087WSZ3 146 aa13.24□□□□□ -0.29
TRIM3-206ENST00000528227 A0A0B4J2C4 111 aa13.22□□□□□ -0.29
TRIM3-206ENST00000528227 C14orf144Q96I85 54 aa13.2□□□□□ -0.3
TRIM3-206ENST00000528227 HIGD1BQ9P298 99 aa13.19□□□□□ -0.3
TRIM3-206ENST00000528227 H3BMG7 143 aa13.18□□□□□ -0.3
TRIM3-206ENST00000528227 KRTAP9-8Q9BYQ0 159 aa13.17□□□□□ -0.3
TRIM3-206ENST00000528227 TRBV20-1A0A075B6N2 111 aa13.16□□□□□ -0.3
TRIM3-206ENST00000528227 DSCR10P59022 87 aa13.16□□□□□ -0.3
TRIM3-206ENST00000528227 A0A1B0GX51 115 aa13.14□□□□□ -0.31
TRIM3-206ENST00000528227 GHRHP01286 108 aa13.13□□□□□ -0.31
TRIM3-206ENST00000528227 FABP2P12104 132 aa13.13□□□□□ -0.31
TRIM3-206ENST00000528227 C2orf91Q6ZV80 131 aa13.13□□□□□ -0.31
TRIM3-206ENST00000528227 PAM16Q9Y3D7 125 aa13.12□□□□□ -0.31
TRIM3-206ENST00000528227 A0A1W2PNM2 257 aa13.11□□□□□ -0.31
TRIM3-206ENST00000528227 SPATA45Q537H7 98 aa13.11□□□□□ -0.31
TRIM3-206ENST00000528227 S100A1P23297 94 aa13.1□□□□□ -0.31
TRIM3-206ENST00000528227 SIGMAR1Q99720 223 aa13.1□□□□□ -0.31
TRIM3-206ENST00000528227 CEND1Q8N111 149 aa13.08□□□□□ -0.32
TRIM3-206ENST00000528227 PRO1854Q9UHT4 67 aa13.08□□□□□ -0.32
TRIM3-206ENST00000528227 KRTAP16-1A8MUX0 517 aa13.06□□□□□ -0.32
TRIM3-206ENST00000528227 LINC00313P59037 77 aa13.04□□□□□ -0.32
TRIM3-206ENST00000528227 TMEM238LA0A1B0GVL6 79 aa13.03□□□□□ -0.32
TRIM3-206ENST00000528227 A6NJY4 79 aa13.03□□□□□ -0.32
TRIM3-206ENST00000528227 TRIAP1O43715 76 aa13.03□□□□□ -0.32
TRIM3-206ENST00000528227 VAMP8Q9BV40 100 aa13.03□□□□□ -0.32
TRIM3-206ENST00000528227 IGKV4-1P06312 121 aa13.01□□□□□ -0.33
TRIM3-206ENST00000528227 FXYD2P54710 66 aa13.01□□□□□ -0.33
TRIM3-206ENST00000528227 TRBV7-4A0A0J9YYF1 115 aa13□□□□□ -0.33
TRIM3-206ENST00000528227 ANKRD29Q8N6D5 301 aa12.99□□□□□ -0.33
TRIM3-206ENST00000528227 USH2AO75445 5202 aa12.99□□□□□ -0.33
TRIM3-206ENST00000528227 FAM236DA0A1B0GTK5 79 aa12.96□□□□□ -0.33
TRIM3-206ENST00000528227 FAM236CP0DP71 79 aa12.96□□□□□ -0.33
TRIM3-206ENST00000528227 NOTCH2NLQ7Z3S9 236 aa12.96□□□□□ -0.33
TRIM3-206ENST00000528227 A0A1B0GV72 72 aa12.95□□□□□ -0.34
TRIM3-206ENST00000528227 ORMDL1Q9P0S3 153 aa12.95□□□□□ -0.34
TRIM3-206ENST00000528227 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.94□□□□□ -0.34
TRIM3-206ENST00000528227 DNAL4O96015 105 aa12.94□□□□□ -0.34
TRIM3-206ENST00000528227 MT2AP02795 61 aa12.94□□□□□ -0.34
TRIM3-206ENST00000528227 MPLKIPQ8TAP9 179 aa12.93□□□□□ -0.34
TRIM3-206ENST00000528227 SSPOA2VEC9 5147 aa12.93□□□□□ -0.34
TRIM3-206ENST00000528227 H3BQ85 93 aa12.92□□□□□ -0.34
TRIM3-206ENST00000528227 HRES1P13985 223 aa12.92□□□□□ -0.34
TRIM3-206ENST00000528227 LINC00472Q9H8W2 130 aa12.92□□□□□ -0.34
TRIM3-206ENST00000528227 DEFB116Q30KQ4 102 aa12.91□□□□□ -0.34
TRIM3-206ENST00000528227 RBM12B-AS1Q9P1G2 102 aa12.89□□□□□ -0.35
TRIM3-206ENST00000528227 TMEM256-PLSCR3K7ERE1 68 aa12.88□□□□□ -0.35
TRIM3-206ENST00000528227 KRTAP9-7A8MTY7 169 aa12.87□□□□□ -0.35
TRIM3-206ENST00000528227 CCKP06307 115 aa12.87□□□□□ -0.35
TRIM3-206ENST00000528227 IGHV6-1A0A0B4J1U7 121 aa12.86□□□□□ -0.35
TRIM3-206ENST00000528227 TRACP01848 142 aa12.86□□□□□ -0.35
TRIM3-206ENST00000528227 PSMB2P49721 201 aa12.86□□□□□ -0.35
TRIM3-206ENST00000528227 K7ERJ3 54 aa12.84□□□□□ -0.35
TRIM3-206ENST00000528227 MT1FP04733 61 aa12.84□□□□□ -0.35
TRIM3-206ENST00000528227 HSD52Q0P140 79 aa12.82□□□□□ -0.36
TRIM3-206ENST00000528227 COX6CP09669 75 aa12.81□□□□□ -0.36
TRIM3-206ENST00000528227 UBE2V1Q13404 147 aa12.79□□□□□ -0.36
TRIM3-206ENST00000528227 LCE2BO14633 110 aa12.77□□□□□ -0.37
TRIM3-206ENST00000528227 C8orf87E5RJ46 101 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms