RNA–Protein interactions for RNA: ENST00000527840.1

SOX6-209, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-209ENST00000527840 H3BUT2 72 aa1.93□□□□□ -2.1
SOX6-209ENST00000527840 NMUP48645 174 aa1.93□□□□□ -2.1
SOX6-209ENST00000527840 FXYD2P54710 66 aa1.93□□□□□ -2.1
SOX6-209ENST00000527840 COX17Q14061 63 aa1.93□□□□□ -2.1
SOX6-209ENST00000527840 TMEM170BQ5T4T1 132 aa1.93□□□□□ -2.1
SOX6-209ENST00000527840 LYRM7Q5U5X0 104 aa1.93□□□□□ -2.1
SOX6-209ENST00000527840 KRTAP13-1Q8IUC0 172 aa1.93□□□□□ -2.1
SOX6-209ENST00000527840 PCP2Q8IVA1 136 aa1.93□□□□□ -2.1
SOX6-209ENST00000527840 Q8NDZ9 215 aa1.93□□□□□ -2.1
SOX6-209ENST00000527840 ZNF625Q96I27 306 aaPredicted RBP1.93□□□□□ -2.1
SOX6-209ENST00000527840 FAM218AQ96MZ4 157 aa1.93□□□□□ -2.1
SOX6-209ENST00000527840 ERG28Q9UKR5 140 aa1.93□□□□□ -2.1
SOX6-209ENST00000527840 TRBV20-1A0A075B6N2 111 aa1.92□□□□□ -2.1
SOX6-209ENST00000527840 IGKV2-28A0A075B6P5 120 aa1.92□□□□□ -2.1
SOX6-209ENST00000527840 IGKV2D-26A0A0A0MRZ7 120 aa1.92□□□□□ -2.1
SOX6-209ENST00000527840 MYMXA0A1B0GTQ4 84 aa1.92□□□□□ -2.1
SOX6-209ENST00000527840 TMEM223A0PJW6 202 aa1.92□□□□□ -2.1
SOX6-209ENST00000527840 H0Y8G0 127 aa1.92□□□□□ -2.1
SOX6-209ENST00000527840 H3BMG7 143 aa1.92□□□□□ -2.1
SOX6-209ENST00000527840 BCE1O60756 84 aa1.92□□□□□ -2.1
SOX6-209ENST00000527840 IGKV2D-28P01615 120 aa1.92□□□□□ -2.1
SOX6-209ENST00000527840 PFN2P35080 140 aa1.92□□□□□ -2.1
SOX6-209ENST00000527840 SFTA2Q6UW10 78 aa1.92□□□□□ -2.1
SOX6-209ENST00000527840 MTURNQ8N3F0 131 aa1.92□□□□□ -2.1
SOX6-209ENST00000527840 SIGMAR1Q99720 223 aa1.92□□□□□ -2.1
SOX6-209ENST00000527840 SND1-IT1Q9HBX3 110 aa1.92□□□□□ -2.1
SOX6-209ENST00000527840 SPANXB1Q9NS25 103 aaPredicted RBP1.92□□□□□ -2.1
SOX6-209ENST00000527840 RPL13AP40429 203 aaKnown RBP1.91□□□□□ -2.1
SOX6-209ENST00000527840 RPL28P46779 137 aaKnown RBP1.91□□□□□ -2.1
SOX6-209ENST00000527840 HERV-K104P63124 156 aa1.91□□□□□ -2.1
SOX6-209ENST00000527840 NKAPP1Q8N9T2 125 aa1.91□□□□□ -2.1
SOX6-209ENST00000527840 HIST1H4GQ99525 98 aa1.91□□□□□ -2.1
SOX6-209ENST00000527840 OCR1Q9BZK8 76 aa1.91□□□□□ -2.1
SOX6-209ENST00000527840 NHP2Q9NX24 153 aaKnown RBP1.91□□□□□ -2.1
SOX6-209ENST00000527840 A0A0U1RRA0 63 aa1.9□□□□□ -2.11
SOX6-209ENST00000527840 K7ERJ3 54 aa1.9□□□□□ -2.11
SOX6-209ENST00000527840 M0R378 163 aa1.9□□□□□ -2.11
SOX6-209ENST00000527840 UBE2AP49459 152 aa1.9□□□□□ -2.11
SOX6-209ENST00000527840 LINC00158P58513 81 aa1.9□□□□□ -2.11
SOX6-209ENST00000527840 TSPEAR-AS2P59090 65 aa1.9□□□□□ -2.11
SOX6-209ENST00000527840 HERVK_113P61574 105 aa1.9□□□□□ -2.11
SOX6-209ENST00000527840 KRTAP13-2Q52LG2 175 aa1.9□□□□□ -2.11
SOX6-209ENST00000527840 Q6ZVQ6 151 aa1.9□□□□□ -2.11
SOX6-209ENST00000527840 PPDPFLQ8WWR9 84 aa1.9□□□□□ -2.11
SOX6-209ENST00000527840 RAB37Q96AX2 223 aa1.9□□□□□ -2.11
SOX6-209ENST00000527840 TMEM126AQ9H061 195 aa1.9□□□□□ -2.11
SOX6-209ENST00000527840 MUC17Q685J3 4493 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 A0A0B4J2C4 111 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 LOC107984156A0A0G2JMH3 177 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 ZNF815PA8K554 130 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 TSPAN13O95857 204 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 CRYGAP11844 174 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 SPRR1AP35321 89 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 PRLHP81277 87 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 ETDBQ3ZM63 59 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 FAM229BQ4G0N7 80 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 FAM19A1Q7Z5A9 133 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 TEN1Q86WV5 123 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 ARL17AQ8IVW1 177 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 MIR7-3HGQ8N6C7 128 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 PLEKHB2Q96CS7 222 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 NAA38Q9BRA0 125 aaKnown RBP1.89□□□□□ -2.11
SOX6-209ENST00000527840 SPANXDQ9BXN6 97 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 PPDPFQ9H3Y8 114 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 NDUFA12Q9UI09 145 aa1.89□□□□□ -2.11
SOX6-209ENST00000527840 FAM240AA0A1B0GVK7 77 aa1.88□□□□□ -2.11
SOX6-209ENST00000527840 J3QQQ9 107 aa1.88□□□□□ -2.11
SOX6-209ENST00000527840 NCR3O14931 201 aa1.88□□□□□ -2.11
SOX6-209ENST00000527840 LEPROTO15243 131 aa1.88□□□□□ -2.11
SOX6-209ENST00000527840 PRR4Q16378 134 aa1.88□□□□□ -2.11
SOX6-209ENST00000527840 MEIG1Q5JSS6 88 aa1.88□□□□□ -2.11
SOX6-209ENST00000527840 Q6Q795 121 aa1.88□□□□□ -2.11
SOX6-209ENST00000527840 DAND5Q8N907 189 aa1.88□□□□□ -2.11
SOX6-209ENST00000527840 TTTY13Q9BZ97 58 aa1.88□□□□□ -2.11
SOX6-209ENST00000527840 KCNQ1DNQ9H478 68 aa1.88□□□□□ -2.11
SOX6-209ENST00000527840 A0A0J9YXY3 114 aa1.87□□□□□ -2.11
SOX6-209ENST00000527840 TRBV10-3A0A0K0K1G6 114 aa1.87□□□□□ -2.11
SOX6-209ENST00000527840 TRBV10-2A0A0K0K1G8 114 aa1.87□□□□□ -2.11
SOX6-209ENST00000527840 TIMM17BO60830 172 aa1.87□□□□□ -2.11
SOX6-209ENST00000527840 SCGB1D4Q6XE38 83 aa1.87□□□□□ -2.11
SOX6-209ENST00000527840 C3orf22Q8N5N4 141 aa1.87□□□□□ -2.11
SOX6-209ENST00000527840 LINC00337Q8N6G1 96 aa1.87□□□□□ -2.11
SOX6-209ENST00000527840 LINC00304Q8N9R0 145 aa1.87□□□□□ -2.11
SOX6-209ENST00000527840 SMCR5Q8TEV8 140 aa1.87□□□□□ -2.11
SOX6-209ENST00000527840 SPRR4Q96PI1 79 aa1.87□□□□□ -2.11
SOX6-209ENST00000527840 HIGD2AQ9BW72 106 aa1.87□□□□□ -2.11
SOX6-209ENST00000527840 SPANXCQ9NY87 97 aa1.87□□□□□ -2.11
SOX6-209ENST00000527840 PRO1854Q9UHT4 67 aa1.87□□□□□ -2.11
SOX6-209ENST00000527840 FAT4Q6V0I7 4981 aa1.87□□□□□ -2.11
SOX6-209ENST00000527840 H3BT86 120 aa1.86□□□□□ -2.11
SOX6-209ENST00000527840 SLC25A20O43772 301 aa1.86□□□□□ -2.11
SOX6-209ENST00000527840 NDUFC2O95298 119 aa1.86□□□□□ -2.11
SOX6-209ENST00000527840 TCL1BO95988 128 aa1.86□□□□□ -2.11
SOX6-209ENST00000527840 IGLV6-57P01721 117 aa1.86□□□□□ -2.11
SOX6-209ENST00000527840 SCGB1C2P0DMR2 95 aa1.86□□□□□ -2.11
SOX6-209ENST00000527840 IFITM1P13164 125 aa1.86□□□□□ -2.11
SOX6-209ENST00000527840 LGALS3P17931 250 aaKnown RBP1.86□□□□□ -2.11
SOX6-209ENST00000527840 NDUFV3P56181 108 aaKnown RBP1.86□□□□□ -2.11
SOX6-209ENST00000527840 ATXN8Q156A1 80 aa1.86□□□□□ -2.11
SOX6-209ENST00000527840 LINC00483Q53H64 154 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms