RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 LINC00575Q6W349 94 aa11.89□□□□□ -0.51
TRAPPC4-208ENST00000527680 hADV29S1A0JD25 119 aa11.87□□□□□ -0.51
TRAPPC4-208ENST00000527680 KRTAP10-6P60371 365 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-208ENST00000527680 Q6ZQY7 126 aa11.87□□□□□ -0.51
TRAPPC4-208ENST00000527680 Q6JHZ5 121 aa11.86□□□□□ -0.51
TRAPPC4-208ENST00000527680 LORP23490 312 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC4-208ENST00000527680 HSBP1L1C9JCN9 74 aa11.83□□□□□ -0.52
TRAPPC4-208ENST00000527680 OCIAD2Q56VL3 154 aa11.82□□□□□ -0.52
TRAPPC4-208ENST00000527680 TRBV7-7A0A0K0K1E9 115 aa11.81□□□□□ -0.52
TRAPPC4-208ENST00000527680 IGFL1Q6UW32 110 aa11.81□□□□□ -0.52
TRAPPC4-208ENST00000527680 CLEC2BQ92478 149 aa11.81□□□□□ -0.52
TRAPPC4-208ENST00000527680 S100A2P29034 98 aa11.78□□□□□ -0.52
TRAPPC4-208ENST00000527680 ATP11AUNQ6ZP68 121 aa11.78□□□□□ -0.52
TRAPPC4-208ENST00000527680 Q6Q795 121 aa11.77□□□□□ -0.53
TRAPPC4-208ENST00000527680 OBSCN-AS1Q96MR7 158 aa11.77□□□□□ -0.53
TRAPPC4-208ENST00000527680 SNHG12Q9BXW3 62 aa11.77□□□□□ -0.53
TRAPPC4-208ENST00000527680 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-208ENST00000527680 C12orf57Q99622 126 aa11.74□□□□□ -0.53
TRAPPC4-208ENST00000527680 BVES-AS1Q5T3Y7 98 aa11.73□□□□□ -0.53
TRAPPC4-208ENST00000527680 LST1O00453 97 aa11.72□□□□□ -0.53
TRAPPC4-208ENST00000527680 HIST3H2BBQ8N257 126 aa11.72□□□□□ -0.53
TRAPPC4-208ENST00000527680 HIST1H2BLQ99880 126 aa11.72□□□□□ -0.53
TRAPPC4-208ENST00000527680 HIST1H4GQ99525 98 aa11.71□□□□□ -0.53
TRAPPC4-208ENST00000527680 Q75L30 129 aa11.7□□□□□ -0.54
TRAPPC4-208ENST00000527680 PPDPFLQ8WWR9 84 aa11.7□□□□□ -0.54
TRAPPC4-208ENST00000527680 H3BUT2 72 aa11.69□□□□□ -0.54
TRAPPC4-208ENST00000527680 SCGB1D1O95968 90 aa11.68□□□□□ -0.54
TRAPPC4-208ENST00000527680 Q96NJ1 140 aa11.68□□□□□ -0.54
TRAPPC4-208ENST00000527680 FLGP20930 4061 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC4-208ENST00000527680 SNCGO76070 127 aa11.65□□□□□ -0.54
TRAPPC4-208ENST00000527680 S100A6P06703 90 aa11.63□□□□□ -0.55
TRAPPC4-208ENST00000527680 SS18L2Q9UHA2 77 aa11.62□□□□□ -0.55
TRAPPC4-208ENST00000527680 RAB37Q96AX2 223 aa11.59□□□□□ -0.55
TRAPPC4-208ENST00000527680 COX8AP10176 69 aa11.57□□□□□ -0.56
TRAPPC4-208ENST00000527680 CFC1P0CG37 223 aa11.56□□□□□ -0.56
TRAPPC4-208ENST00000527680 TEN1Q86WV5 123 aa11.56□□□□□ -0.56
TRAPPC4-208ENST00000527680 H0YGX0 51 aa11.55□□□□□ -0.56
TRAPPC4-208ENST00000527680 NDUFV3P56181 108 aaKnown RBP11.55□□□□□ -0.56
TRAPPC4-208ENST00000527680 A0A087WSZ3 146 aa11.52□□□□□ -0.57
TRAPPC4-208ENST00000527680 TRBV20-1A0A075B6N2 111 aa11.51□□□□□ -0.57
TRAPPC4-208ENST00000527680 DLEU1O43261 78 aa11.51□□□□□ -0.57
TRAPPC4-208ENST00000527680 C20orf166-AS1Q96NR2 134 aa11.51□□□□□ -0.57
TRAPPC4-208ENST00000527680 H3BMG7 143 aa11.5□□□□□ -0.57
TRAPPC4-208ENST00000527680 C14orf144Q96I85 54 aa11.5□□□□□ -0.57
TRAPPC4-208ENST00000527680 FAM218AQ96MZ4 157 aa11.5□□□□□ -0.57
TRAPPC4-208ENST00000527680 A8MUU9 505 aa11.49□□□□□ -0.57
TRAPPC4-208ENST00000527680 FABP2P12104 132 aa11.49□□□□□ -0.57
TRAPPC4-208ENST00000527680 GHRHP01286 108 aa11.48□□□□□ -0.57
TRAPPC4-208ENST00000527680 A0A0B4J2C4 111 aa11.46□□□□□ -0.57
TRAPPC4-208ENST00000527680 DSCR10P59022 87 aa11.45□□□□□ -0.58
TRAPPC4-208ENST00000527680 HIGD1BQ9P298 99 aa11.44□□□□□ -0.58
TRAPPC4-208ENST00000527680 SIGMAR1Q99720 223 aa11.42□□□□□ -0.58
TRAPPC4-208ENST00000527680 PAM16Q9Y3D7 125 aa11.42□□□□□ -0.58
TRAPPC4-208ENST00000527680 SPATA45Q537H7 98 aa11.41□□□□□ -0.58
TRAPPC4-208ENST00000527680 A0A1B0GX51 115 aa11.4□□□□□ -0.58
TRAPPC4-208ENST00000527680 S100A1P23297 94 aa11.4□□□□□ -0.58
TRAPPC4-208ENST00000527680 PRO1854Q9UHT4 67 aa11.4□□□□□ -0.58
TRAPPC4-208ENST00000527680 LINC00313P59037 77 aa11.38□□□□□ -0.59
TRAPPC4-208ENST00000527680 A0A1W2PNM2 257 aa11.37□□□□□ -0.59
TRAPPC4-208ENST00000527680 CEND1Q8N111 149 aa11.37□□□□□ -0.59
TRAPPC4-208ENST00000527680 TMEM238LA0A1B0GVL6 79 aa11.36□□□□□ -0.59
TRAPPC4-208ENST00000527680 A6NJY4 79 aa11.36□□□□□ -0.59
TRAPPC4-208ENST00000527680 FAM236DA0A1B0GTK5 79 aa11.35□□□□□ -0.59
TRAPPC4-208ENST00000527680 IGKV4-1P06312 121 aa11.35□□□□□ -0.59
TRAPPC4-208ENST00000527680 FAM236CP0DP71 79 aa11.35□□□□□ -0.59
TRAPPC4-208ENST00000527680 C2orf91Q6ZV80 131 aa11.35□□□□□ -0.59
TRAPPC4-208ENST00000527680 ANKRD29Q8N6D5 301 aa11.35□□□□□ -0.59
TRAPPC4-208ENST00000527680 VAMP8Q9BV40 100 aa11.35□□□□□ -0.59
TRAPPC4-208ENST00000527680 KRTAP9-8Q9BYQ0 159 aa11.35□□□□□ -0.59
TRAPPC4-208ENST00000527680 A0A1B0GV72 72 aa11.33□□□□□ -0.6
TRAPPC4-208ENST00000527680 DNAL4O96015 105 aa11.31□□□□□ -0.6
TRAPPC4-208ENST00000527680 TRIAP1O43715 76 aa11.3□□□□□ -0.6
TRAPPC4-208ENST00000527680 ORMDL1Q9P0S3 153 aa11.29□□□□□ -0.6
TRAPPC4-208ENST00000527680 TRBV7-4A0A0J9YYF1 115 aa11.28□□□□□ -0.6
TRAPPC4-208ENST00000527680 KRTAP16-1A8MUX0 517 aa11.28□□□□□ -0.6
TRAPPC4-208ENST00000527680 FXYD2P54710 66 aa11.28□□□□□ -0.6
TRAPPC4-208ENST00000527680 DEFB116Q30KQ4 102 aa11.28□□□□□ -0.6
TRAPPC4-208ENST00000527680 PSMB2P49721 201 aa11.26□□□□□ -0.61
TRAPPC4-208ENST00000527680 RBM12B-AS1Q9P1G2 102 aa11.26□□□□□ -0.61
TRAPPC4-208ENST00000527680 H3BQ85 93 aa11.25□□□□□ -0.61
TRAPPC4-208ENST00000527680 NOTCH2NLQ7Z3S9 236 aa11.24□□□□□ -0.61
TRAPPC4-208ENST00000527680 TMEM256-PLSCR3K7ERE1 68 aa11.23□□□□□ -0.61
TRAPPC4-208ENST00000527680 IGHV6-1A0A0B4J1U7 121 aa11.22□□□□□ -0.61
TRAPPC4-208ENST00000527680 TRACP01848 142 aa11.22□□□□□ -0.61
TRAPPC4-208ENST00000527680 CCKP06307 115 aa11.22□□□□□ -0.61
TRAPPC4-208ENST00000527680 COX6CP09669 75 aa11.21□□□□□ -0.61
TRAPPC4-208ENST00000527680 LINC00472Q9H8W2 130 aa11.19□□□□□ -0.62
TRAPPC4-208ENST00000527680 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-208ENST00000527680 MT2AP02795 61 aa11.16□□□□□ -0.62
TRAPPC4-208ENST00000527680 HRES1P13985 223 aa11.16□□□□□ -0.62
TRAPPC4-208ENST00000527680 VPS25Q9BRG1 176 aa11.16□□□□□ -0.62
TRAPPC4-208ENST00000527680 K7ERJ3 54 aa11.15□□□□□ -0.62
TRAPPC4-208ENST00000527680 KRTAP9-7A8MTY7 169 aa11.14□□□□□ -0.63
TRAPPC4-208ENST00000527680 USH2AO75445 5202 aa11.14□□□□□ -0.63
TRAPPC4-208ENST00000527680 HSD52Q0P140 79 aa11.13□□□□□ -0.63
TRAPPC4-208ENST00000527680 MPLKIPQ8TAP9 179 aa11.13□□□□□ -0.63
TRAPPC4-208ENST00000527680 UBE2V1Q13404 147 aa11.12□□□□□ -0.63
TRAPPC4-208ENST00000527680 KRTAP10-10P60014 251 aa11.11□□□□□ -0.63
TRAPPC4-208ENST00000527680 C8orf87E5RJ46 101 aa11.09□□□□□ -0.63
TRAPPC4-208ENST00000527680 MTURNQ8N3F0 131 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms