RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 TRBV7-4A0A0J9YYF1 115 aa11.61□□□□□ -0.55
SMPD1-203ENST00000527275 PRLHP81277 87 aa11.61□□□□□ -0.55
SMPD1-203ENST00000527275 TRBV7-7A0A0K0K1E9 115 aa11.6□□□□□ -0.55
SMPD1-203ENST00000527275 IGLV5-48A0A075B6I7 105 aa11.6□□□□□ -0.55
SMPD1-203ENST00000527275 C3orf22Q8N5N4 141 aa11.56□□□□□ -0.56
SMPD1-203ENST00000527275 PSORS1C2Q9UIG4 136 aa11.56□□□□□ -0.56
SMPD1-203ENST00000527275 HIGD2AQ9BW72 106 aa11.55□□□□□ -0.56
SMPD1-203ENST00000527275 H0Y9J4 135 aa11.54□□□□□ -0.56
SMPD1-203ENST00000527275 IMUPQ9GZP8 106 aa11.52□□□□□ -0.56
SMPD1-203ENST00000527275 SMR3BP02814 79 aaPredicted RBP11.52□□□□□ -0.57
SMPD1-203ENST00000527275 UBE2AP49459 152 aa11.52□□□□□ -0.57
SMPD1-203ENST00000527275 UBL5Q9BZL1 73 aa11.52□□□□□ -0.57
SMPD1-203ENST00000527275 CCDC179H3BU77 68 aa11.51□□□□□ -0.57
SMPD1-203ENST00000527275 BCE1O60756 84 aa11.51□□□□□ -0.57
SMPD1-203ENST00000527275 Q6JHZ5 121 aa11.51□□□□□ -0.57
SMPD1-203ENST00000527275 C1orf137Q5JT78 98 aa11.51□□□□□ -0.57
SMPD1-203ENST00000527275 VPS13BQ7Z7G8 4022 aa11.5□□□□□ -0.57
SMPD1-203ENST00000527275 FAT1Q14517 4588 aa11.49□□□□□ -0.57
SMPD1-203ENST00000527275 IGKV3D-7A0A0C4DH55 119 aa11.49□□□□□ -0.57
SMPD1-203ENST00000527275 CDK2AP2O75956 126 aa11.48□□□□□ -0.57
SMPD1-203ENST00000527275 SMIM29Q86T20 159 aa11.48□□□□□ -0.57
SMPD1-203ENST00000527275 FAM236AA0A1B0GUQ0 79 aa11.48□□□□□ -0.57
SMPD1-203ENST00000527275 FAM236BA0A1B0GV22 79 aa11.48□□□□□ -0.57
SMPD1-203ENST00000527275 SRRM2Q9UQ35 2752 aaKnown RBP11.47□□□□□ -0.57
SMPD1-203ENST00000527275 KIAA1109Q2LD37 5005 aa11.46□□□□□ -0.57
SMPD1-203ENST00000527275 HSPG2P98160 4391 aa11.46□□□□□ -0.58
SMPD1-203ENST00000527275 KRTAP13-1Q8IUC0 172 aa11.45□□□□□ -0.58
SMPD1-203ENST00000527275 Q6ZVQ6 151 aa11.44□□□□□ -0.58
SMPD1-203ENST00000527275 F8WEM9 126 aa11.43□□□□□ -0.58
SMPD1-203ENST00000527275 IGLV7-43P04211 117 aa11.43□□□□□ -0.58
SMPD1-203ENST00000527275 ATP5EP2Q5VTU8 51 aa11.43□□□□□ -0.58
SMPD1-203ENST00000527275 SS18L2Q9UHA2 77 aa11.41□□□□□ -0.58
SMPD1-203ENST00000527275 SPRR1BP22528 89 aa11.4□□□□□ -0.58
SMPD1-203ENST00000527275 RYR1P21817 5038 aa11.4□□□□□ -0.58
SMPD1-203ENST00000527275 A0A1W2PNM2 257 aa11.4□□□□□ -0.59
SMPD1-203ENST00000527275 ZNF861PO60384 105 aa11.4□□□□□ -0.59
SMPD1-203ENST00000527275 RPL37AP61513 92 aaKnown RBP11.4□□□□□ -0.59
SMPD1-203ENST00000527275 Q8NBF4 154 aa11.37□□□□□ -0.59
SMPD1-203ENST00000527275 IGLV8-61A0A075B6I0 122 aa11.36□□□□□ -0.59
SMPD1-203ENST00000527275 A0A1B0GW54 56 aa11.36□□□□□ -0.59
SMPD1-203ENST00000527275 HIST1H4AP62805 103 aaKnown RBP11.35□□□□□ -0.59
SMPD1-203ENST00000527275 KRTAP10-4P60372 401 aaPredicted RBP11.34□□□□□ -0.59
SMPD1-203ENST00000527275 NREPQ16612 68 aa11.34□□□□□ -0.59
SMPD1-203ENST00000527275 IGFL1Q6UW32 110 aa11.34□□□□□ -0.59
SMPD1-203ENST00000527275 SPRR4Q96PI1 79 aa11.34□□□□□ -0.59
SMPD1-203ENST00000527275 A0A087WVE0 104 aa11.33□□□□□ -0.6
SMPD1-203ENST00000527275 A0A0G2JQZ4 141 aa11.32□□□□□ -0.6
SMPD1-203ENST00000527275 FAM229AH3BQW9 127 aa11.32□□□□□ -0.6
SMPD1-203ENST00000527275 CXCL6P80162 114 aa11.32□□□□□ -0.6
SMPD1-203ENST00000527275 KRTAP17-1Q9BYP8 105 aa11.32□□□□□ -0.6
SMPD1-203ENST00000527275 CRYGAP11844 174 aa11.3□□□□□ -0.6
SMPD1-203ENST00000527275 Q5VSD8 79 aa11.29□□□□□ -0.6
SMPD1-203ENST00000527275 PLA2G1BP04054 148 aaKnown RBP11.28□□□□□ -0.6
SMPD1-203ENST00000527275 ZNF706Q9Y5V0 76 aaPredicted RBP11.27□□□□□ -0.61
SMPD1-203ENST00000527275 UQCRQO14949 82 aa11.26□□□□□ -0.61
SMPD1-203ENST00000527275 ATOX1O00244 68 aa11.25□□□□□ -0.61
SMPD1-203ENST00000527275 LINC00483Q53H64 154 aa11.25□□□□□ -0.61
SMPD1-203ENST00000527275 Q8N1X5 172 aa11.25□□□□□ -0.61
SMPD1-203ENST00000527275 BIRC6Q9NR09 4857 aa11.25□□□□□ -0.61
SMPD1-203ENST00000527275 SPINK6Q6UWN8 80 aa11.24□□□□□ -0.61
SMPD1-203ENST00000527275 BPY2O14599 106 aa11.23□□□□□ -0.61
SMPD1-203ENST00000527275 C9orf153Q5TBE3 101 aa11.23□□□□□ -0.61
SMPD1-203ENST00000527275 COX7CP15954 63 aa11.23□□□□□ -0.61
SMPD1-203ENST00000527275 ANAPC11Q9NYG5 84 aa11.21□□□□□ -0.62
SMPD1-203ENST00000527275 IGLV9-49A0A0B4J1Y8 123 aa11.2□□□□□ -0.62
SMPD1-203ENST00000527275 A0A087WSZ3 146 aa11.19□□□□□ -0.62
SMPD1-203ENST00000527275 Q8N9L7 120 aa11.16□□□□□ -0.62
SMPD1-203ENST00000527275 KRTAP1-4P0C5Y4 121 aa11.16□□□□□ -0.62
SMPD1-203ENST00000527275 SERP2Q8N6R1 65 aa11.14□□□□□ -0.63
SMPD1-203ENST00000527275 IGKV4-1P06312 121 aa11.13□□□□□ -0.63
SMPD1-203ENST00000527275 MOBPQ13875 183 aa11.1□□□□□ -0.63
SMPD1-203ENST00000527275 SMIM20Q8N5G0 67 aa11.1□□□□□ -0.63
SMPD1-203ENST00000527275 KRTAP4-5Q9BYR2 181 aa11.1□□□□□ -0.63
SMPD1-203ENST00000527275 A0A087X002 238 aa11.1□□□□□ -0.63
SMPD1-203ENST00000527275 CYSTM1Q9H1C7 97 aa11.1□□□□□ -0.63
SMPD1-203ENST00000527275 FLG2Q5D862 2391 aaPredicted RBP11.09□□□□□ -0.63
SMPD1-203ENST00000527275 DSCR10P59022 87 aa11.09□□□□□ -0.63
SMPD1-203ENST00000527275 DEFB116Q30KQ4 102 aa11.08□□□□□ -0.64
SMPD1-203ENST00000527275 FAM229BQ4G0N7 80 aa11.06□□□□□ -0.64
SMPD1-203ENST00000527275 HRCT1Q6UXD1 115 aa11.05□□□□□ -0.64
SMPD1-203ENST00000527275 HERC2O95714 4834 aa11.05□□□□□ -0.64
SMPD1-203ENST00000527275 PKHD1L1Q86WI1 4243 aa11.04□□□□□ -0.64
SMPD1-203ENST00000527275 LRP1Q07954 4544 aaKnown RBP11.03□□□□□ -0.64
SMPD1-203ENST00000527275 K7EQZ3 153 aa11.03□□□□□ -0.64
SMPD1-203ENST00000527275 KRTAP13-2Q52LG2 175 aa11.03□□□□□ -0.64
SMPD1-203ENST00000527275 LINC00472Q9H8W2 130 aa11.03□□□□□ -0.64
SMPD1-203ENST00000527275 PRR26Q8N8Z3 221 aa11.02□□□□□ -0.65
SMPD1-203ENST00000527275 MYCBP2O75592 4640 aa11□□□□□ -0.65
SMPD1-203ENST00000527275 TRAV7A0A075B6U4 112 aa10.98□□□□□ -0.65
SMPD1-203ENST00000527275 SSBP3-AS1Q7Z2R9 100 aa10.97□□□□□ -0.65
SMPD1-203ENST00000527275 TYMSOSQ8TAI1 123 aa10.95□□□□□ -0.66
SMPD1-203ENST00000527275 ABCA13Q86UQ4 5058 aa10.94□□□□□ -0.66
SMPD1-203ENST00000527275 J3KT08 172 aa10.93□□□□□ -0.66
SMPD1-203ENST00000527275 TMEM258P61165 79 aa10.93□□□□□ -0.66
SMPD1-203ENST00000527275 Q96NJ1 140 aa10.93□□□□□ -0.66
SMPD1-203ENST00000527275 A8MWP4 228 aa10.92□□□□□ -0.66
SMPD1-203ENST00000527275 HCG22E2RYF7 251 aa10.92□□□□□ -0.66
SMPD1-203ENST00000527275 PRR15Q8IV56 129 aa10.91□□□□□ -0.66
SMPD1-203ENST00000527275 C20orf197Q8N268 126 aa10.91□□□□□ -0.66
SMPD1-203ENST00000527275 FAT3Q8TDW7 4589 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms