RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 SCXQ7RTU7 201 aa7.41□□□□□ -1.22
VPS11-202ENST00000526829 C1orf64Q8NEQ6 169 aa7.41□□□□□ -1.22
VPS11-202ENST00000526829 A0A087X002 238 aa7.4□□□□□ -1.22
VPS11-202ENST00000526829 TRBV6-8A0A0A6YYG3 113 aa7.4□□□□□ -1.22
VPS11-202ENST00000526829 NREPQ16612 68 aa7.4□□□□□ -1.22
VPS11-202ENST00000526829 C9orf116Q5BN46 136 aaPredicted RBP7.4□□□□□ -1.22
VPS11-202ENST00000526829 NOTCH2NLQ7Z3S9 236 aa7.4□□□□□ -1.22
VPS11-202ENST00000526829 C16orf74Q96GX8 76 aa7.4□□□□□ -1.23
VPS11-202ENST00000526829 TOMM7Q9P0U1 55 aa7.4□□□□□ -1.23
VPS11-202ENST00000526829 Q8N814 137 aa7.39□□□□□ -1.23
VPS11-202ENST00000526829 HSPG2P98160 4391 aa7.38□□□□□ -1.23
VPS11-202ENST00000526829 PLA2G2DQ9UNK4 145 aa7.38□□□□□ -1.23
VPS11-202ENST00000526829 TRGV1A0A0A0MS02 117 aa7.37□□□□□ -1.23
VPS11-202ENST00000526829 NBDYA0A0U1RRE5 68 aa7.37□□□□□ -1.23
VPS11-202ENST00000526829 MOBPQ13875 183 aa7.37□□□□□ -1.23
VPS11-202ENST00000526829 NOP10Q9NPE3 64 aaKnown RBP7.37□□□□□ -1.23
VPS11-202ENST00000526829 LRP1BQ9NZR2 4599 aa7.36□□□□□ -1.23
VPS11-202ENST00000526829 LOC110117498A0A087WWA1 95 aa7.35□□□□□ -1.23
VPS11-202ENST00000526829 LRCOL1A6NCL2 159 aa7.34□□□□□ -1.23
VPS11-202ENST00000526829 Q6ZQT0 140 aa7.34□□□□□ -1.23
VPS11-202ENST00000526829 CHCHD10Q8WYQ3 142 aaPredicted RBP7.34□□□□□ -1.23
VPS11-202ENST00000526829 KRTAP4-5Q9BYR2 181 aa7.34□□□□□ -1.23
VPS11-202ENST00000526829 LINC01547P58512 204 aaPredicted RBP7.32□□□□□ -1.24
VPS11-202ENST00000526829 Q6ZTI0 123 aa7.32□□□□□ -1.24
VPS11-202ENST00000526829 APOBP04114 4563 aaKnown RBP7.32□□□□□ -1.24
VPS11-202ENST00000526829 A6NED7 52 aa7.31□□□□□ -1.24
VPS11-202ENST00000526829 LOC101927531A0A1B0GV80 90 aa7.31□□□□□ -1.24
VPS11-202ENST00000526829 PDE6GP18545 87 aa7.31□□□□□ -1.24
VPS11-202ENST00000526829 IGLV4-60A0A075B6I1 120 aa7.3□□□□□ -1.24
VPS11-202ENST00000526829 TRGV2A0A075B6R0 118 aa7.3□□□□□ -1.24
VPS11-202ENST00000526829 H3BQ85 93 aa7.3□□□□□ -1.24
VPS11-202ENST00000526829 CDK2AP2O75956 126 aa7.3□□□□□ -1.24
VPS11-202ENST00000526829 Q8IZM0 81 aa7.3□□□□□ -1.24
VPS11-202ENST00000526829 Q8N3U1 123 aa7.3□□□□□ -1.24
VPS11-202ENST00000526829 DNAH5Q8TE73 4624 aa7.3□□□□□ -1.24
VPS11-202ENST00000526829 IGKV3OR2-268A0A0C4DH90 116 aa7.29□□□□□ -1.24
VPS11-202ENST00000526829 H3BNG1 76 aa7.29□□□□□ -1.24
VPS11-202ENST00000526829 LINC00575Q6W349 94 aa7.29□□□□□ -1.24
VPS11-202ENST00000526829 RETNLBQ9BQ08 111 aa7.29□□□□□ -1.24
VPS11-202ENST00000526829 LINC00959A0A1B0GUT2 108 aa7.29□□□□□ -1.24
VPS11-202ENST00000526829 LINC00612Q8N6U2 182 aa7.29□□□□□ -1.24
VPS11-202ENST00000526829 COX17Q14061 63 aa7.28□□□□□ -1.24
VPS11-202ENST00000526829 Q8N9P0 234 aaPredicted RBP7.28□□□□□ -1.24
VPS11-202ENST00000526829 BPY2O14599 106 aa7.28□□□□□ -1.24
VPS11-202ENST00000526829 HAMPP81172 84 aa7.28□□□□□ -1.24
VPS11-202ENST00000526829 PRAC1Q96KF2 57 aa7.28□□□□□ -1.24
VPS11-202ENST00000526829 PRR15LQ9BU68 103 aa7.27□□□□□ -1.25
VPS11-202ENST00000526829 REG3AQ06141 175 aa7.26□□□□□ -1.25
VPS11-202ENST00000526829 CASC2Q6XLA1 102 aa7.26□□□□□ -1.25
VPS11-202ENST00000526829 OCR1Q9BZK8 76 aa7.26□□□□□ -1.25
VPS11-202ENST00000526829 KRTAP1-5Q9BYS1 174 aa7.24□□□□□ -1.25
VPS11-202ENST00000526829 TRGV4A0A0C4DH28 118 aa7.24□□□□□ -1.25
VPS11-202ENST00000526829 ELOF1P60002 83 aaKnown RBP7.23□□□□□ -1.25
VPS11-202ENST00000526829 Q8N1X5 172 aa7.23□□□□□ -1.25
VPS11-202ENST00000526829 A0A096LPF7 62 aa7.22□□□□□ -1.25
VPS11-202ENST00000526829 PRO0255Q9UI72 69 aa7.22□□□□□ -1.25
VPS11-202ENST00000526829 A0A1B0GUV1 79 aa7.22□□□□□ -1.25
VPS11-202ENST00000526829 HIGD2AQ9BW72 106 aa7.22□□□□□ -1.25
VPS11-202ENST00000526829 A0A1B0GW54 56 aa7.2□□□□□ -1.26
VPS11-202ENST00000526829 KRTAP10-2P60368 255 aa7.2□□□□□ -1.26
VPS11-202ENST00000526829 ZCCHC13Q8WW36 166 aaKnown RBP7.19□□□□□ -1.26
VPS11-202ENST00000526829 Q6ZQY7 126 aa7.18□□□□□ -1.26
VPS11-202ENST00000526829 Q9BRP9 147 aa7.18□□□□□ -1.26
VPS11-202ENST00000526829 IGLV6-57P01721 117 aa7.17□□□□□ -1.26
VPS11-202ENST00000526829 Q6ZRN7 208 aaPredicted RBP7.17□□□□□ -1.26
VPS11-202ENST00000526829 Q8NDZ9 215 aa7.17□□□□□ -1.26
VPS11-202ENST00000526829 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.17□□□□□ -1.26
VPS11-202ENST00000526829 HERC1Q15751 4861 aa7.15□□□□□ -1.27
VPS11-202ENST00000526829 NDUFB1O75438 58 aa7.15□□□□□ -1.27
VPS11-202ENST00000526829 SEC61BP60468 96 aaKnown RBP7.15□□□□□ -1.27
VPS11-202ENST00000526829 FAT1Q14517 4588 aa7.14□□□□□ -1.27
VPS11-202ENST00000526829 COX7BP24311 80 aa7.13□□□□□ -1.27
VPS11-202ENST00000526829 VPS13BQ7Z7G8 4022 aa7.12□□□□□ -1.27
VPS11-202ENST00000526829 A0A087WTM6 91 aa7.12□□□□□ -1.27
VPS11-202ENST00000526829 IGKV4-1P06312 121 aa7.12□□□□□ -1.27
VPS11-202ENST00000526829 CLPSL2Q6UWE3 100 aa7.12□□□□□ -1.27
VPS11-202ENST00000526829 DNAH10OSP0CZ25 163 aa7.11□□□□□ -1.27
VPS11-202ENST00000526829 WFDC10BQ8IUB3 73 aa7.11□□□□□ -1.27
VPS11-202ENST00000526829 ADM2Q7Z4H4 148 aa7.11□□□□□ -1.27
VPS11-202ENST00000526829 ROMO1P60602 79 aa7.09□□□□□ -1.27
VPS11-202ENST00000526829 DMBT1Q9UGM3 2413 aaPredicted RBP7.09□□□□□ -1.27
VPS11-202ENST00000526829 LINC00208Q96KT6 92 aa7.09□□□□□ -1.27
VPS11-202ENST00000526829 GVQW2A0A096LPI5 108 aaPredicted RBP7.08□□□□□ -1.28
VPS11-202ENST00000526829 IGLV5-52A0A0A0MRZ9 124 aa7.08□□□□□ -1.28
VPS11-202ENST00000526829 FAM229AH3BQW9 127 aa7.08□□□□□ -1.28
VPS11-202ENST00000526829 UNQ6190/PRO20217Q6UXQ8 127 aa7.08□□□□□ -1.28
VPS11-202ENST00000526829 XAGE1AQ9HD64 81 aa7.08□□□□□ -1.28
VPS11-202ENST00000526829 DNAH8Q96JB1 4490 aa7.07□□□□□ -1.28
VPS11-202ENST00000526829 KRTAP10-1P60331 282 aa7.07□□□□□ -1.28
VPS11-202ENST00000526829 SPAG11BQ08648 103 aa7.07□□□□□ -1.28
VPS11-202ENST00000526829 C10orf25Q5T742 122 aa7.07□□□□□ -1.28
VPS11-202ENST00000526829 PLAC8Q9NZF1 115 aa7.07□□□□□ -1.28
VPS11-202ENST00000526829 LINC01556Q5JQF7 62 aa7.06□□□□□ -1.28
VPS11-202ENST00000526829 SPANXA2-OT1Q8N9U9 137 aa7.06□□□□□ -1.28
VPS11-202ENST00000526829 LINC01558Q9Y6Z2 57 aa7.06□□□□□ -1.28
VPS11-202ENST00000526829 Q5VSD8 79 aa7.06□□□□□ -1.28
VPS11-202ENST00000526829 ANGP03950 147 aaKnown RBP7.05□□□□□ -1.28
VPS11-202ENST00000526829 LELP1Q5T871 98 aa7.05□□□□□ -1.28
VPS11-202ENST00000526829 IGLV10-54A0A075B6I4 117 aa7.04□□□□□ -1.28
VPS11-202ENST00000526829 Q8N9L7 120 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms