RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 C1orf134Q5TEV5 83 aa9.87□□□□□ -0.83
USH1C-204ENST00000526313 KRTAP13-1Q8IUC0 172 aa9.87□□□□□ -0.83
USH1C-204ENST00000526313 BCE1O60756 84 aa9.86□□□□□ -0.83
USH1C-204ENST00000526313 NREPQ16612 68 aa9.85□□□□□ -0.83
USH1C-204ENST00000526313 CRYGAP11844 174 aa9.85□□□□□ -0.83
USH1C-204ENST00000526313 C3orf84H3BNL1 204 aa9.84□□□□□ -0.83
USH1C-204ENST00000526313 LINC00476Q8WZB0 136 aa9.84□□□□□ -0.83
USH1C-204ENST00000526313 DPH3Q96FX2 82 aa9.84□□□□□ -0.83
USH1C-204ENST00000526313 SERP2Q8N6R1 65 aa9.83□□□□□ -0.84
USH1C-204ENST00000526313 WWC2-AS2Q96NR7 200 aa9.83□□□□□ -0.84
USH1C-204ENST00000526313 F8WEM9 126 aa9.82□□□□□ -0.84
USH1C-204ENST00000526313 LY6G6CO95867 125 aa9.82□□□□□ -0.84
USH1C-204ENST00000526313 UBE2AP49459 152 aa9.82□□□□□ -0.84
USH1C-204ENST00000526313 PLAC8Q9NZF1 115 aa9.82□□□□□ -0.84
USH1C-204ENST00000526313 TGP01266 2768 aa9.81□□□□□ -0.84
USH1C-204ENST00000526313 SCXQ7RTU7 201 aa9.81□□□□□ -0.84
USH1C-204ENST00000526313 IGFL1Q6UW32 110 aa9.8□□□□□ -0.84
USH1C-204ENST00000526313 ALMS1Q8TCU4 4167 aa9.8□□□□□ -0.84
USH1C-204ENST00000526313 IGLV5-52A0A0A0MRZ9 124 aa9.78□□□□□ -0.84
USH1C-204ENST00000526313 BPY2O14599 106 aa9.77□□□□□ -0.85
USH1C-204ENST00000526313 SRRM2Q9UQ35 2752 aaKnown RBP9.77□□□□□ -0.85
USH1C-204ENST00000526313 IGKV4-1P06312 121 aa9.76□□□□□ -0.85
USH1C-204ENST00000526313 FRAS1Q86XX4 4008 aa9.75□□□□□ -0.85
USH1C-204ENST00000526313 A0A0G2JQZ4 141 aa9.74□□□□□ -0.85
USH1C-204ENST00000526313 DNAH8Q96JB1 4490 aa9.74□□□□□ -0.85
USH1C-204ENST00000526313 PSORS1C2Q9UIG4 136 aa9.73□□□□□ -0.85
USH1C-204ENST00000526313 DNAH11Q96DT5 4516 aa9.72□□□□□ -0.85
USH1C-204ENST00000526313 Q8N9L7 120 aa9.72□□□□□ -0.85
USH1C-204ENST00000526313 CYSTM1Q9H1C7 97 aa9.72□□□□□ -0.85
USH1C-204ENST00000526313 TMEM258P61165 79 aa9.71□□□□□ -0.86
USH1C-204ENST00000526313 TRAV7A0A075B6U4 112 aa9.7□□□□□ -0.86
USH1C-204ENST00000526313 J3KT08 172 aa9.7□□□□□ -0.86
USH1C-204ENST00000526313 LINC00483Q53H64 154 aa9.7□□□□□ -0.86
USH1C-204ENST00000526313 DNAH5Q8TE73 4624 aa9.69□□□□□ -0.86
USH1C-204ENST00000526313 DSCR10P59022 87 aa9.68□□□□□ -0.86
USH1C-204ENST00000526313 ZNF861PO60384 105 aa9.67□□□□□ -0.86
USH1C-204ENST00000526313 KRTAP10-2P60368 255 aa9.67□□□□□ -0.86
USH1C-204ENST00000526313 A0A087WSZ3 146 aa9.66□□□□□ -0.86
USH1C-204ENST00000526313 RPS28P62857 69 aaKnown RBP9.64□□□□□ -0.87
USH1C-204ENST00000526313 ZNF706Q9Y5V0 76 aaPredicted RBP9.64□□□□□ -0.87
USH1C-204ENST00000526313 RPL37AP61513 92 aaKnown RBP9.63□□□□□ -0.87
USH1C-204ENST00000526313 FAT2Q9NYQ8 4349 aa9.63□□□□□ -0.87
USH1C-204ENST00000526313 PKD1P98161 4303 aa9.63□□□□□ -0.87
USH1C-204ENST00000526313 FAM30AQ9NZY2 134 aa9.62□□□□□ -0.87
USH1C-204ENST00000526313 C20orf197Q8N268 126 aa9.61□□□□□ -0.87
USH1C-204ENST00000526313 K7EQZ3 153 aa9.6□□□□□ -0.87
USH1C-204ENST00000526313 Q6ZSA8 131 aa9.6□□□□□ -0.87
USH1C-204ENST00000526313 IGLV7-43P04211 117 aa9.59□□□□□ -0.87
USH1C-204ENST00000526313 CIRBP-AS1Q8TBR5 109 aa9.59□□□□□ -0.87
USH1C-204ENST00000526313 OCR1Q9BZK8 76 aa9.59□□□□□ -0.87
USH1C-204ENST00000526313 HYDINQ4G0P3 5121 aa9.59□□□□□ -0.87
USH1C-204ENST00000526313 LINC00472Q9H8W2 130 aa9.59□□□□□ -0.87
USH1C-204ENST00000526313 IGLV9-49A0A0B4J1Y8 123 aa9.56□□□□□ -0.88
USH1C-204ENST00000526313 KLKP1Q107X0 134 aa9.56□□□□□ -0.88
USH1C-204ENST00000526313 KRTAP10-1P60331 282 aa9.55□□□□□ -0.88
USH1C-204ENST00000526313 DEFB116Q30KQ4 102 aa9.55□□□□□ -0.88
USH1C-204ENST00000526313 HCG22E2RYF7 251 aa9.52□□□□□ -0.89
USH1C-204ENST00000526313 FAM236DA0A1B0GTK5 79 aa9.51□□□□□ -0.89
USH1C-204ENST00000526313 FAM236CP0DP71 79 aa9.51□□□□□ -0.89
USH1C-204ENST00000526313 ANAPC11Q9NYG5 84 aa9.51□□□□□ -0.89
USH1C-204ENST00000526313 A8MWP4 228 aa9.49□□□□□ -0.89
USH1C-204ENST00000526313 MOBPQ13875 183 aa9.49□□□□□ -0.89
USH1C-204ENST00000526313 PRR15Q8IV56 129 aa9.49□□□□□ -0.89
USH1C-204ENST00000526313 SACSQ9NZJ4 4579 aa9.49□□□□□ -0.89
USH1C-204ENST00000526313 H7BZZ5 65 aa9.49□□□□□ -0.89
USH1C-204ENST00000526313 Q96NJ1 140 aa9.49□□□□□ -0.89
USH1C-204ENST00000526313 LCE6AA0A183 80 aa9.48□□□□□ -0.89
USH1C-204ENST00000526313 OXTP01178 125 aa9.48□□□□□ -0.89
USH1C-204ENST00000526313 SNURFQ9Y675 71 aa9.47□□□□□ -0.89
USH1C-204ENST00000526313 LRP1BQ9NZR2 4599 aa9.47□□□□□ -0.89
USH1C-204ENST00000526313 KRTAP29-1A8MX34 341 aaPredicted RBP9.47□□□□□ -0.89
USH1C-204ENST00000526313 TMEM254Q8TBM7 123 aa9.47□□□□□ -0.89
USH1C-204ENST00000526313 A0A0U1RQV1 116 aa9.44□□□□□ -0.9
USH1C-204ENST00000526313 NDUFC1O43677 76 aa9.43□□□□□ -0.9
USH1C-204ENST00000526313 HRCT1Q6UXD1 115 aa9.42□□□□□ -0.9
USH1C-204ENST00000526313 SERP1Q9Y6X1 66 aa9.41□□□□□ -0.9
USH1C-204ENST00000526313 SSBP3-AS1Q7Z2R9 100 aa9.41□□□□□ -0.9
USH1C-204ENST00000526313 CD164Q04900 197 aa9.4□□□□□ -0.9
USH1C-204ENST00000526313 WFDC13Q8IUB5 93 aa9.4□□□□□ -0.9
USH1C-204ENST00000526313 CASC2Q6XLA1 102 aa9.38□□□□□ -0.91
USH1C-204ENST00000526313 C5orf47Q569G3 176 aa9.38□□□□□ -0.91
USH1C-204ENST00000526313 NDUFB1O75438 58 aa9.37□□□□□ -0.91
USH1C-204ENST00000526313 LINC00336Q6ZUF6 198 aa9.37□□□□□ -0.91
USH1C-204ENST00000526313 MMP24-AS1A0A0U1RRL7 71 aa9.37□□□□□ -0.91
USH1C-204ENST00000526313 VPS13BQ7Z7G8 4022 aa9.36□□□□□ -0.91
USH1C-204ENST00000526313 ASB16-AS1Q495Z4 193 aa9.36□□□□□ -0.91
USH1C-204ENST00000526313 FAM229BQ4G0N7 80 aa9.36□□□□□ -0.91
USH1C-204ENST00000526313 Q5XG85 94 aa9.35□□□□□ -0.91
USH1C-204ENST00000526313 ATP5EP56381 51 aaPredicted RBP9.35□□□□□ -0.91
USH1C-204ENST00000526313 ZCCHC13Q8WW36 166 aaKnown RBP9.35□□□□□ -0.91
USH1C-204ENST00000526313 A0A087X002 238 aa9.33□□□□□ -0.92
USH1C-204ENST00000526313 C4orf26Q17RF5 130 aa9.33□□□□□ -0.92
USH1C-204ENST00000526313 PKHD1P08F94 4074 aa9.32□□□□□ -0.92
USH1C-204ENST00000526313 KRTAP13-2Q52LG2 175 aa9.32□□□□□ -0.92
USH1C-204ENST00000526313 KRTAP1-4P0C5Y4 121 aa9.32□□□□□ -0.92
USH1C-204ENST00000526313 A0A1B0GVX0 72 aa9.31□□□□□ -0.92
USH1C-204ENST00000526313 A0A1B0GVY2 172 aa9.31□□□□□ -0.92
USH1C-204ENST00000526313 hDV103S1A0JD37 113 aa9.29□□□□□ -0.92
USH1C-204ENST00000526313 C8orf17Q9NRJ1 99 aa9.29□□□□□ -0.92
USH1C-204ENST00000526313 DYNC1H1Q14204 4646 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms