RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 Q8NBF4 154 aa4.12□□□□□ -1.75
CLNS1A-205ENST00000526009 PRELID3AQ96N28 172 aa4.12□□□□□ -1.75
CLNS1A-205ENST00000526009 LITAFQ99732 161 aa4.12□□□□□ -1.75
CLNS1A-205ENST00000526009 HIGD2AQ9BW72 106 aa4.12□□□□□ -1.75
CLNS1A-205ENST00000526009 MAP1LC3AQ9H492 121 aa4.12□□□□□ -1.75
CLNS1A-205ENST00000526009 NXT2Q9NPJ8 142 aaKnown RBP4.12□□□□□ -1.75
CLNS1A-205ENST00000526009 NHP2Q9NX24 153 aaKnown RBP4.12□□□□□ -1.75
CLNS1A-205ENST00000526009 LOC389332A0A1B0GUA5 103 aa4.11□□□□□ -1.75
CLNS1A-205ENST00000526009 M0R378 163 aa4.11□□□□□ -1.75
CLNS1A-205ENST00000526009 IGKCP01834 107 aa4.11□□□□□ -1.75
CLNS1A-205ENST00000526009 TEN1Q86WV5 123 aa4.11□□□□□ -1.75
CLNS1A-205ENST00000526009 SPRR4Q96PI1 79 aa4.11□□□□□ -1.75
CLNS1A-205ENST00000526009 A0A096LNJ9 63 aa4.1□□□□□ -1.75
CLNS1A-205ENST00000526009 LINC01549A6NIU2 74 aa4.1□□□□□ -1.75
CLNS1A-205ENST00000526009 IGIPA6NJ69 53 aa4.1□□□□□ -1.75
CLNS1A-205ENST00000526009 M0R2T5 61 aa4.1□□□□□ -1.75
CLNS1A-205ENST00000526009 PLNP26678 52 aa4.1□□□□□ -1.75
CLNS1A-205ENST00000526009 PCP2Q8IVA1 136 aa4.1□□□□□ -1.75
CLNS1A-205ENST00000526009 COX7B2Q8TF08 81 aa4.1□□□□□ -1.75
CLNS1A-205ENST00000526009 NAA38Q9BRA0 125 aaKnown RBP4.1□□□□□ -1.75
CLNS1A-205ENST00000526009 ZNF706Q9Y5V0 76 aaPredicted RBP4.1□□□□□ -1.75
CLNS1A-205ENST00000526009 IGLV8-61A0A075B6I0 122 aa4.09□□□□□ -1.75
CLNS1A-205ENST00000526009 RPS29P62273 56 aaKnown RBP4.09□□□□□ -1.75
CLNS1A-205ENST00000526009 HIST1H4GQ99525 98 aa4.09□□□□□ -1.75
CLNS1A-205ENST00000526009 TRAV12-1A0A0B4J245 112 aa4.08□□□□□ -1.76
CLNS1A-205ENST00000526009 MYMXA0A1B0GTQ4 84 aa4.08□□□□□ -1.76
CLNS1A-205ENST00000526009 K7EMI3 77 aa4.08□□□□□ -1.76
CLNS1A-205ENST00000526009 SNCGO76070 127 aa4.08□□□□□ -1.76
CLNS1A-205ENST00000526009 MT-ATP8P03928 68 aa4.08□□□□□ -1.76
CLNS1A-205ENST00000526009 SCGB1C2P0DMR2 95 aa4.08□□□□□ -1.76
CLNS1A-205ENST00000526009 IFITM1P13164 125 aa4.08□□□□□ -1.76
CLNS1A-205ENST00000526009 NDUFV3P56181 108 aaKnown RBP4.08□□□□□ -1.76
CLNS1A-205ENST00000526009 ORMDL2Q53FV1 153 aa4.08□□□□□ -1.76
CLNS1A-205ENST00000526009 Q8N377 158 aa4.08□□□□□ -1.76
CLNS1A-205ENST00000526009 Q8N8P6 123 aa4.08□□□□□ -1.76
CLNS1A-205ENST00000526009 SS18L2Q9UHA2 77 aa4.08□□□□□ -1.76
CLNS1A-205ENST00000526009 SLC25A20O43772 301 aa4.07□□□□□ -1.76
CLNS1A-205ENST00000526009 PFN2P35080 140 aa4.07□□□□□ -1.76
CLNS1A-205ENST00000526009 PCOTHQ58A44 107 aa4.07□□□□□ -1.76
CLNS1A-205ENST00000526009 SND1-IT1Q9HBX3 110 aa4.07□□□□□ -1.76
CLNS1A-205ENST00000526009 FLGP20930 4061 aaPredicted RBP4.06□□□□□ -1.76
CLNS1A-205ENST00000526009 TINCRA0A1B0GVN0 87 aa4.06□□□□□ -1.76
CLNS1A-205ENST00000526009 K7ERJ3 54 aa4.06□□□□□ -1.76
CLNS1A-205ENST00000526009 C5orf47Q569G3 176 aa4.06□□□□□ -1.76
CLNS1A-205ENST00000526009 TIMM17AQ99595 171 aa4.06□□□□□ -1.76
CLNS1A-205ENST00000526009 IMUPQ9GZP8 106 aa4.06□□□□□ -1.76
CLNS1A-205ENST00000526009 SSBP3-AS1Q7Z2R9 100 aa4.05□□□□□ -1.76
CLNS1A-205ENST00000526009 SMIM20Q8N5G0 67 aa4.05□□□□□ -1.76
CLNS1A-205ENST00000526009 OCR1Q9BZK8 76 aa4.05□□□□□ -1.76
CLNS1A-205ENST00000526009 FAM240AA0A1B0GVK7 77 aa4.04□□□□□ -1.76
CLNS1A-205ENST00000526009 PSMB2P49721 201 aa4.04□□□□□ -1.76
CLNS1A-205ENST00000526009 HERVK_113P61574 105 aa4.04□□□□□ -1.76
CLNS1A-205ENST00000526009 MOBPQ13875 183 aa4.04□□□□□ -1.76
CLNS1A-205ENST00000526009 COX17Q14061 63 aa4.04□□□□□ -1.76
CLNS1A-205ENST00000526009 SMCR5Q8TEV8 140 aa4.04□□□□□ -1.76
CLNS1A-205ENST00000526009 LOC107984156A0A0G2JMH3 177 aa4.03□□□□□ -1.76
CLNS1A-205ENST00000526009 A0A1B0GX51 115 aa4.03□□□□□ -1.76
CLNS1A-205ENST00000526009 ACYP1P07311 99 aa4.03□□□□□ -1.76
CLNS1A-205ENST00000526009 RPS28P62857 69 aaKnown RBP4.03□□□□□ -1.76
CLNS1A-205ENST00000526009 LINC00483Q53H64 154 aa4.03□□□□□ -1.76
CLNS1A-205ENST00000526009 ARL17AQ8IVW1 177 aa4.03□□□□□ -1.76
CLNS1A-205ENST00000526009 Q8NDZ9 215 aa4.03□□□□□ -1.76
CLNS1A-205ENST00000526009 TOMM6Q96B49 74 aa4.03□□□□□ -1.76
CLNS1A-205ENST00000526009 MEIG1Q5JSS6 88 aa4.02□□□□□ -1.77
CLNS1A-205ENST00000526009 COX6B2Q6YFQ2 88 aa4.02□□□□□ -1.77
CLNS1A-205ENST00000526009 SCGB3A1Q96QR1 104 aa4.02□□□□□ -1.77
CLNS1A-205ENST00000526009 PRO1854Q9UHT4 67 aa4.02□□□□□ -1.77
CLNS1A-205ENST00000526009 TRBV7-7A0A0K0K1E9 115 aa4.01□□□□□ -1.77
CLNS1A-205ENST00000526009 ATXN8Q156A1 80 aa4.01□□□□□ -1.77
CLNS1A-205ENST00000526009 SCGB1D4Q6XE38 83 aa4.01□□□□□ -1.77
CLNS1A-205ENST00000526009 ANKRD29Q8N6D5 301 aa4.01□□□□□ -1.77
CLNS1A-205ENST00000526009 OR13C6PQ8NH95 151 aa4.01□□□□□ -1.77
CLNS1A-205ENST00000526009 ZNF625Q96I27 306 aaPredicted RBP4.01□□□□□ -1.77
CLNS1A-205ENST00000526009 SSPOA2VEC9 5147 aa4.01□□□□□ -1.77
CLNS1A-205ENST00000526009 A0A0B4J2C4 111 aa4□□□□□ -1.77
CLNS1A-205ENST00000526009 ETDCA0A1B0GVM5 59 aa4□□□□□ -1.77
CLNS1A-205ENST00000526009 C9orf92A6NGG3 77 aa4□□□□□ -1.77
CLNS1A-205ENST00000526009 ZNF815PA8K554 130 aa4□□□□□ -1.77
CLNS1A-205ENST00000526009 H3BT86 120 aa4□□□□□ -1.77
CLNS1A-205ENST00000526009 CCDC179H3BU77 68 aa4□□□□□ -1.77
CLNS1A-205ENST00000526009 J3KT08 172 aa4□□□□□ -1.77
CLNS1A-205ENST00000526009 TCL1BO95988 128 aa4□□□□□ -1.77
CLNS1A-205ENST00000526009 SPRR1AP35321 89 aa4□□□□□ -1.77
CLNS1A-205ENST00000526009 PMVKQ15126 192 aa4□□□□□ -1.77
CLNS1A-205ENST00000526009 TMEM170BQ5T4T1 132 aa4□□□□□ -1.77
CLNS1A-205ENST00000526009 TRBV10-2A0A0K0K1G8 114 aa3.99□□□□□ -1.77
CLNS1A-205ENST00000526009 KRTAP4-16G5E9R7 235 aaPredicted RBP3.99□□□□□ -1.77
CLNS1A-205ENST00000526009 UQCRQO14949 82 aa3.99□□□□□ -1.77
CLNS1A-205ENST00000526009 KCNQ1DNQ9H478 68 aa3.99□□□□□ -1.77
CLNS1A-205ENST00000526009 USH2AO75445 5202 aa3.99□□□□□ -1.77
CLNS1A-205ENST00000526009 C11orf86A6NJI1 115 aa3.98□□□□□ -1.77
CLNS1A-205ENST00000526009 C9JAW5 83 aa3.98□□□□□ -1.77
CLNS1A-205ENST00000526009 COX6CP09669 75 aa3.98□□□□□ -1.77
CLNS1A-205ENST00000526009 LINC00158P58513 81 aa3.98□□□□□ -1.77
CLNS1A-205ENST00000526009 SFTA2Q6UW10 78 aa3.98□□□□□ -1.77
CLNS1A-205ENST00000526009 TTTY13Q9BZ97 58 aa3.98□□□□□ -1.77
CLNS1A-205ENST00000526009 ERC2-IT1O76042 136 aa3.97□□□□□ -1.77
CLNS1A-205ENST00000526009 C9orf153Q5TBE3 101 aa3.97□□□□□ -1.77
CLNS1A-205ENST00000526009 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.77
CLNS1A-205ENST00000526009 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms