RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 ABCA9Q8IUA7 1624 aa0.29□□□□□ -2.36
ATM-208ENST00000525537 DDX60LQ5H9U9 1706 aaKnown RBP0.28□□□□□ -2.36
ATM-208ENST00000525537 PLXNC1O60486 1568 aa0.28□□□□□ -2.37
ATM-208ENST00000525537 MADDQ8WXG6 1647 aa0.27□□□□□ -2.37
ATM-208ENST00000525537 CRIP1P50238 77 aa0.27□□□□□ -2.37
ATM-208ENST00000525537 APC2O95996 2303 aa0.27□□□□□ -2.37
ATM-208ENST00000525537 PARP4Q9UKK3 1724 aaKnown RBP0.27□□□□□ -2.37
ATM-208ENST00000525537 PCLOQ9Y6V0 5065 aa0.26□□□□□ -2.37
ATM-208ENST00000525537 DEPDC5O75140 1603 aa0.25□□□□□ -2.37
ATM-208ENST00000525537 ETDCA0A1B0GVM5 59 aa0.25□□□□□ -2.37
ATM-208ENST00000525537 LYNX1G3V0Z9 82 aa0.25□□□□□ -2.37
ATM-208ENST00000525537 ZC3H13Q5T200 1668 aaKnown RBP0.24□□□□□ -2.37
ATM-208ENST00000525537 EFCAB5A4FU69 1503 aa0.23□□□□□ -2.37
ATM-208ENST00000525537 AKAP13Q12802 2813 aa0.23□□□□□ -2.37
ATM-208ENST00000525537 ITSN1Q15811 1721 aa0.23□□□□□ -2.37
ATM-208ENST00000525537 NRAPQ86VF7 1730 aa0.23□□□□□ -2.37
ATM-208ENST00000525537 HECTD4Q9Y4D8 3996 aa0.22□□□□□ -2.37
ATM-208ENST00000525537 PDE4DIPQ5VU43 2346 aa0.22□□□□□ -2.37
ATM-208ENST00000525537 TJP1Q07157 1748 aa0.21□□□□□ -2.38
ATM-208ENST00000525537 FLNAP21333 2647 aaKnown RBP0.21□□□□□ -2.38
ATM-208ENST00000525537 NHSQ6T4R5 1651 aa0.21□□□□□ -2.38
ATM-208ENST00000525537 MROH1Q8NDA8 1641 aa0.21□□□□□ -2.38
ATM-208ENST00000525537 RNF17Q9BXT8 1623 aaKnown RBP0.21□□□□□ -2.38
ATM-208ENST00000525537 DEFB130BP0DP73 79 aa0.21□□□□□ -2.38
ATM-208ENST00000525537 DEFB130AP0DP74 79 aa0.21□□□□□ -2.38
ATM-208ENST00000525537 IAPPP10997 89 aa0.21□□□□□ -2.38
ATM-208ENST00000525537 MUC2Q02817 5179 aa0.2□□□□□ -2.38
ATM-208ENST00000525537 SMIM31A0A1B0GVY4 71 aa0.2□□□□□ -2.38
ATM-208ENST00000525537 A0A087WWC5 75 aa0.19□□□□□ -2.38
ATM-208ENST00000525537 LINC01549A6NIU2 74 aa0.19□□□□□ -2.38
ATM-208ENST00000525537 H0YGG7 62 aa0.19□□□□□ -2.38
ATM-208ENST00000525537 KMT2CQ8NEZ4 4911 aaKnown RBP0.19□□□□□ -2.38
ATM-208ENST00000525537 RYR1P21817 5038 aa0.18□□□□□ -2.38
ATM-208ENST00000525537 SPRR2BP35325 72 aa0.18□□□□□ -2.38
ATM-208ENST00000525537 DEFB114Q30KQ6 69 aa0.18□□□□□ -2.38
ATM-208ENST00000525537 SPRR2GQ9BYE4 73 aa0.18□□□□□ -2.38
ATM-208ENST00000525537 THOC2Q8NI27 1593 aaKnown RBP0.18□□□□□ -2.38
ATM-208ENST00000525537 SSPOA2VEC9 5147 aa0.17□□□□□ -2.38
ATM-208ENST00000525537 ACANP16112 2415 aa0.17□□□□□ -2.38
ATM-208ENST00000525537 NSD1Q96L73 2696 aaPredicted RBP0.16□□□□□ -2.38
ATM-208ENST00000525537 FLNBO75369 2602 aaKnown RBP0.16□□□□□ -2.38
ATM-208ENST00000525537 UBR4Q5T4S7 5183 aa0.15□□□□□ -2.38
ATM-208ENST00000525537 DSPP15924 2871 aaKnown RBP0.14□□□□□ -2.39
ATM-208ENST00000525537 INO80Q9ULG1 1556 aaPredicted RBP0.13□□□□□ -2.39
ATM-208ENST00000525537 LRP2P98164 4655 aa0.13□□□□□ -2.39
ATM-208ENST00000525537 ABCC6O95255 1503 aa0.12□□□□□ -2.39
ATM-208ENST00000525537 LRP1BQ9NZR2 4599 aa0.12□□□□□ -2.39
ATM-208ENST00000525537 HECTD1Q9ULT8 2610 aa0.12□□□□□ -2.39
ATM-208ENST00000525537 PCNX1Q96RV3 2341 aa0.11□□□□□ -2.39
ATM-208ENST00000525537 KIAA0586Q9BVV6 1533 aa0.11□□□□□ -2.39
ATM-208ENST00000525537 RYR2Q92736 4967 aa0.09□□□□□ -2.39
ATM-208ENST00000525537 PRRC2CQ9Y520 2896 aaKnown RBP0.09□□□□□ -2.39
ATM-208ENST00000525537 COL6A3P12111 3177 aa0.09□□□□□ -2.39
ATM-208ENST00000525537 TENM2Q9NT68 2774 aa0.09□□□□□ -2.39
ATM-208ENST00000525537 S100ZQ8WXG8 99 aa0.09□□□□□ -2.4
ATM-208ENST00000525537 TNRC18O15417 2968 aaPredicted RBP0.09□□□□□ -2.4
ATM-208ENST00000525537 MINOS1Q5TGZ0 78 aa0.08□□□□□ -2.4
ATM-208ENST00000525537 LYSTQ99698 3801 aa0.07□□□□□ -2.4
ATM-208ENST00000525537 BPTFQ12830 3046 aa0.07□□□□□ -2.4
ATM-208ENST00000525537 RNF213Q63HN8 5207 aa0.07□□□□□ -2.4
ATM-208ENST00000525537 CCDC180Q9P1Z9 1646 aa0.06□□□□□ -2.4
ATM-208ENST00000525537 C3P01024 1663 aa0.06□□□□□ -2.4
ATM-208ENST00000525537 NBASA2RRP1 2371 aa0.06□□□□□ -2.4
ATM-208ENST00000525537 SFTA3P0C7M3 94 aa0.05□□□□□ -2.4
ATM-208ENST00000525537 PRLHP81277 87 aa0.05□□□□□ -2.4
ATM-208ENST00000525537 ZANQ9Y493 2812 aa0.05□□□□□ -2.4
ATM-208ENST00000525537 MUC12Q9UKN1 5478 aa0.05□□□□□ -2.4
ATM-208ENST00000525537 KIAA1109Q2LD37 5005 aa0.04□□□□□ -2.4
ATM-208ENST00000525537 PKD1P98161 4303 aa0.04□□□□□ -2.4
ATM-208ENST00000525537 PKHD1P08F94 4074 aa0.03□□□□□ -2.4
ATM-208ENST00000525537 ERICH3Q5RHP9 1530 aa0.03□□□□□ -2.4
ATM-208ENST00000525537 ABCA6Q8N139 1617 aa0.03□□□□□ -2.4
ATM-208ENST00000525537 AKAP9Q99996 3911 aa0.03□□□□□ -2.41
ATM-208ENST00000525537 ZZEF1O43149 2961 aa0.03□□□□□ -2.41
ATM-208ENST00000525537 DNAH9Q9NYC9 4486 aa0.02□□□□□ -2.41
ATM-208ENST00000525537 MAP1AP78559 2803 aaPredicted RBP0.02□□□□□ -2.41
ATM-208ENST00000525537 VPS13BQ7Z7G8 4022 aa0.02□□□□□ -2.41
ATM-208ENST00000525537 NBPF19A0A087WUL8 3843 aa0.02□□□□□ -2.41
ATM-208ENST00000525537 NCBP2-AS2Q69YL0 99 aa0.02□□□□□ -2.41
ATM-208ENST00000525537 DEFB106AQ8N104 65 aa0.02□□□□□ -2.41
ATM-208ENST00000525537 S4R3F8 94 aa0.02□□□□□ -2.41
ATM-208ENST00000525537 FLGP20930 4061 aaPredicted RBP0.02□□□□□ -2.41
ATM-208ENST00000525537 RYR3Q15413 4870 aa0.02□□□□□ -2.41
ATM-208ENST00000525537 SVEP1Q4LDE5 3571 aa0.02□□□□□ -2.41
ATM-208ENST00000525537 CREBBPQ92793 2442 aa0.02□□□□□ -2.41
ATM-208ENST00000525537 DNAH3Q8TD57 4116 aa0.01□□□□□ -2.41
ATM-208ENST00000525537 PKHD1L1Q86WI1 4243 aa0.01□□□□□ -2.41
ATM-208ENST00000525537 APOBP04114 4563 aaKnown RBP0.01□□□□□ -2.41
ATM-208ENST00000525537 FAT3Q8TDW7 4589 aa0.01□□□□□ -2.41
ATM-208ENST00000525537 RPS27P42677 84 aaKnown RBP0.01□□□□□ -2.41
ATM-208ENST00000525537 RPS27LQ71UM5 84 aaKnown RBP0.01□□□□□ -2.41
ATM-208ENST00000525537 DNAH6Q9C0G6 4158 aa0.01□□□□□ -2.41
ATM-208ENST00000525537 VPS13DQ5THJ4 4388 aa0.01□□□□□ -2.41
ATM-208ENST00000525537 DNAH11Q96DT5 4516 aa0.01□□□□□ -2.41
ATM-208ENST00000525537 STARD9Q9P2P6 4700 aa0.01□□□□□ -2.41
ATM-208ENST00000525537 ABCA13Q86UQ4 5058 aa0.01□□□□□ -2.41
ATM-208ENST00000525537 STAB1Q9NY15 2570 aa0□□□□□ -2.41
ATM-208ENST00000525537 SPENQ96T58 3664 aaKnown RBP0□□□□□ -2.41
ATM-208ENST00000525537 DNAH2Q9P225 4427 aa0□□□□□ -2.41
ATM-208ENST00000525537 SACSQ9NZJ4 4579 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms