RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 TIMM17BO60830 172 aa3.27□□□□□ -1.89
PABPC1-223ENST00000523636 LINC00315P59091 139 aa3.27□□□□□ -1.89
PABPC1-223ENST00000523636 ZNF56Q15929 161 aa3.27□□□□□ -1.89
PABPC1-223ENST00000523636 ATP11AUNQ6ZP68 121 aa3.27□□□□□ -1.89
PABPC1-223ENST00000523636 Q8N377 158 aa3.27□□□□□ -1.89
PABPC1-223ENST00000523636 C15orf56Q8N910 161 aa3.27□□□□□ -1.89
PABPC1-223ENST00000523636 TRBV7-3A0A075B6L6 115 aa3.26□□□□□ -1.89
PABPC1-223ENST00000523636 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
PABPC1-223ENST00000523636 IBA57-AS1B1ANH7 110 aa3.26□□□□□ -1.89
PABPC1-223ENST00000523636 M0QY20 66 aa3.26□□□□□ -1.89
PABPC1-223ENST00000523636 LECT2O14960 151 aa3.26□□□□□ -1.89
PABPC1-223ENST00000523636 FXYD2P54710 66 aa3.26□□□□□ -1.89
PABPC1-223ENST00000523636 FAM74A4Q5TZK3 123 aa3.26□□□□□ -1.89
PABPC1-223ENST00000523636 NTM-AS1Q6ZSK4 140 aa3.26□□□□□ -1.89
PABPC1-223ENST00000523636 DYNLRB2Q8TF09 96 aa3.26□□□□□ -1.89
PABPC1-223ENST00000523636 CLEC2BQ92478 149 aa3.26□□□□□ -1.89
PABPC1-223ENST00000523636 LINC00467Q9BRT7 94 aa3.26□□□□□ -1.89
PABPC1-223ENST00000523636 DEFB1P60022 68 aa3.25□□□□□ -1.89
PABPC1-223ENST00000523636 SPINK13Q1W4C9 94 aa3.25□□□□□ -1.89
PABPC1-223ENST00000523636 Q6ZSA8 131 aa3.25□□□□□ -1.89
PABPC1-223ENST00000523636 A0A0J9YY99 117 aa3.24□□□□□ -1.89
PABPC1-223ENST00000523636 TMEM223A0PJW6 202 aa3.24□□□□□ -1.89
PABPC1-223ENST00000523636 A8MTW9 85 aa3.24□□□□□ -1.89
PABPC1-223ENST00000523636 H3BMM0 161 aa3.24□□□□□ -1.89
PABPC1-223ENST00000523636 H7C423 109 aa3.24□□□□□ -1.89
PABPC1-223ENST00000523636 CCKP06307 115 aa3.24□□□□□ -1.89
PABPC1-223ENST00000523636 GIG44P09565 113 aaPredicted RBP3.24□□□□□ -1.89
PABPC1-223ENST00000523636 DEFB131AP59861 70 aa3.24□□□□□ -1.89
PABPC1-223ENST00000523636 SYCNQ0VAF6 134 aa3.24□□□□□ -1.89
PABPC1-223ENST00000523636 MIAQ16674 131 aa3.24□□□□□ -1.89
PABPC1-223ENST00000523636 SMCR5Q8TEV8 140 aa3.24□□□□□ -1.89
PABPC1-223ENST00000523636 PRO1854Q9UHT4 67 aa3.24□□□□□ -1.89
PABPC1-223ENST00000523636 IGLV4-69A0A075B6H9 119 aa3.23□□□□□ -1.89
PABPC1-223ENST00000523636 A0A087WTM6 91 aa3.23□□□□□ -1.89
PABPC1-223ENST00000523636 LOC107984156A0A0G2JMH3 177 aa3.23□□□□□ -1.89
PABPC1-223ENST00000523636 COX6CP09669 75 aa3.23□□□□□ -1.89
PABPC1-223ENST00000523636 HTN1P15515 57 aa3.23□□□□□ -1.89
PABPC1-223ENST00000523636 UBE2D1P51668 147 aa3.23□□□□□ -1.89
PABPC1-223ENST00000523636 RPL39P62891 51 aaKnown RBP3.23□□□□□ -1.89
PABPC1-223ENST00000523636 C14orf177Q52M58 125 aa3.23□□□□□ -1.89
PABPC1-223ENST00000523636 ARL17AQ8IVW1 177 aa3.23□□□□□ -1.89
PABPC1-223ENST00000523636 UBE2WQ96B02 151 aa3.23□□□□□ -1.89
PABPC1-223ENST00000523636 TRBV10-1A0A0K0K1A3 114 aa3.22□□□□□ -1.89
PABPC1-223ENST00000523636 TRBV10-2A0A0K0K1G8 114 aa3.22□□□□□ -1.89
PABPC1-223ENST00000523636 IGHV3-53P01767 116 aa3.22□□□□□ -1.89
PABPC1-223ENST00000523636 IGHV3-30P01768 117 aa3.22□□□□□ -1.89
PABPC1-223ENST00000523636 IGHV3-30-5P0DP03 117 aa3.22□□□□□ -1.89
PABPC1-223ENST00000523636 KLKP1Q107X0 134 aa3.22□□□□□ -1.89
PABPC1-223ENST00000523636 Q1T7F1 81 aa3.22□□□□□ -1.89
PABPC1-223ENST00000523636 ASB16-AS1Q495Z4 193 aa3.22□□□□□ -1.89
PABPC1-223ENST00000523636 KRTAP7-1Q8IUC3 87 aa3.22□□□□□ -1.89
PABPC1-223ENST00000523636 AMELXQ99217 191 aa3.22□□□□□ -1.89
PABPC1-223ENST00000523636 TIMM21Q9BVV7 248 aa3.22□□□□□ -1.89
PABPC1-223ENST00000523636 IGHV3-73A0A0B4J1V6 119 aa3.21□□□□□ -1.9
PABPC1-223ENST00000523636 A0A0B4J2C4 111 aa3.21□□□□□ -1.9
PABPC1-223ENST00000523636 PANO1I0J062 215 aa3.21□□□□□ -1.9
PABPC1-223ENST00000523636 ZNF22P17026 224 aaPredicted RBP3.21□□□□□ -1.9
PABPC1-223ENST00000523636 RPL28P46779 137 aaKnown RBP3.21□□□□□ -1.9
PABPC1-223ENST00000523636 Q8NDZ9 215 aa3.21□□□□□ -1.9
PABPC1-223ENST00000523636 RETNLBQ9BQ08 111 aa3.21□□□□□ -1.9
PABPC1-223ENST00000523636 H7BZZ5 65 aa3.2□□□□□ -1.9
PABPC1-223ENST00000523636 RBM3P98179 157 aaKnown RBP3.2□□□□□ -1.9
PABPC1-223ENST00000523636 ATXN8Q156A1 80 aa3.2□□□□□ -1.9
PABPC1-223ENST00000523636 Q1RN00 199 aa3.2□□□□□ -1.9
PABPC1-223ENST00000523636 MUSTN1Q8IVN3 82 aa3.2□□□□□ -1.9
PABPC1-223ENST00000523636 MIR7-3HGQ8N6C7 128 aa3.2□□□□□ -1.9
PABPC1-223ENST00000523636 C1orf64Q8NEQ6 169 aa3.2□□□□□ -1.9
PABPC1-223ENST00000523636 C16orf74Q96GX8 76 aa3.2□□□□□ -1.9
PABPC1-223ENST00000523636 ICOSQ9Y6W8 199 aa3.2□□□□□ -1.9
PABPC1-223ENST00000523636 TRAV13-2A0A0B4J235 113 aa3.19□□□□□ -1.9
PABPC1-223ENST00000523636 TRBV30A0A0K0K1B3 111 aa3.19□□□□□ -1.9
PABPC1-223ENST00000523636 MIFP14174 115 aa3.19□□□□□ -1.9
PABPC1-223ENST00000523636 FAM229BQ4G0N7 80 aa3.19□□□□□ -1.9
PABPC1-223ENST00000523636 TMEM263Q8WUH6 116 aaKnown RBP3.19□□□□□ -1.9
PABPC1-223ENST00000523636 NDUFA12Q9UI09 145 aa3.19□□□□□ -1.9
PABPC1-223ENST00000523636 UBE2D4Q9Y2X8 147 aa3.19□□□□□ -1.9
PABPC1-223ENST00000523636 TRGV1A0A0A0MS02 117 aa3.18□□□□□ -1.9
PABPC1-223ENST00000523636 NDUFA1O15239 70 aa3.18□□□□□ -1.9
PABPC1-223ENST00000523636 IGHV3-33P01772 117 aa3.18□□□□□ -1.9
PABPC1-223ENST00000523636 XCL1P47992 114 aa3.18□□□□□ -1.9
PABPC1-223ENST00000523636 CYSTM1Q9H1C7 97 aa3.18□□□□□ -1.9
PABPC1-223ENST00000523636 IGHV3-64A0A075B6Q5 118 aa3.17□□□□□ -1.9
PABPC1-223ENST00000523636 TRGV2A0A075B6R0 118 aa3.17□□□□□ -1.9
PABPC1-223ENST00000523636 TRBV10-3A0A0K0K1G6 114 aa3.17□□□□□ -1.9
PABPC1-223ENST00000523636 TRBV6-4A0A1B0GX49 114 aa3.17□□□□□ -1.9
PABPC1-223ENST00000523636 A8MUU9 505 aa3.17□□□□□ -1.9
PABPC1-223ENST00000523636 S100A7L2Q5SY68 101 aa3.17□□□□□ -1.9
PABPC1-223ENST00000523636 Q6JHZ5 121 aa3.17□□□□□ -1.9
PABPC1-223ENST00000523636 SFTA2Q6UW10 78 aa3.17□□□□□ -1.9
PABPC1-223ENST00000523636 LYPD5Q6UWN5 251 aa3.17□□□□□ -1.9
PABPC1-223ENST00000523636 Q8N814 137 aa3.17□□□□□ -1.9
PABPC1-223ENST00000523636 LINC00474Q9P2X8 69 aa3.17□□□□□ -1.9
PABPC1-223ENST00000523636 FLGP20930 4061 aaPredicted RBP3.16□□□□□ -1.9
PABPC1-223ENST00000523636 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.16□□□□□ -1.9
PABPC1-223ENST00000523636 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.16□□□□□ -1.9
PABPC1-223ENST00000523636 TRGV4A0A0C4DH28 118 aa3.16□□□□□ -1.9
PABPC1-223ENST00000523636 hDV103S1A0JD37 113 aa3.16□□□□□ -1.9
PABPC1-223ENST00000523636 IGKV2-29A2NJV5 120 aaPredicted RBP3.16□□□□□ -1.9
PABPC1-223ENST00000523636 H7C2G1 150 aa3.16□□□□□ -1.9
PABPC1-223ENST00000523636 ESRGQ1W209 222 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms