RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 KRTAP13-1Q8IUC0 172 aa9.5□□□□□ -0.89
CTNNA1-236ENST00000522792 JMJD7-PLA2G4BH0Y9G9 81 aa9.48□□□□□ -0.89
CTNNA1-236ENST00000522792 NDUFV3P56181 108 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-236ENST00000522792 C3orf22Q8N5N4 141 aa9.48□□□□□ -0.89
CTNNA1-236ENST00000522792 IGLV5-48A0A075B6I7 105 aa9.48□□□□□ -0.89
CTNNA1-236ENST00000522792 RBM3P98179 157 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-236ENST00000522792 Q6Q795 121 aa9.46□□□□□ -0.9
CTNNA1-236ENST00000522792 RYR3Q15413 4870 aa9.45□□□□□ -0.9
CTNNA1-236ENST00000522792 GAGE2AQ6NT46 116 aa9.44□□□□□ -0.9
CTNNA1-236ENST00000522792 LRP1BQ9NZR2 4599 aa9.44□□□□□ -0.9
CTNNA1-236ENST00000522792 SMIM20Q8N5G0 67 aa9.43□□□□□ -0.9
CTNNA1-236ENST00000522792 DYNC1H1Q14204 4646 aaKnown RBP9.42□□□□□ -0.9
CTNNA1-236ENST00000522792 ZNF861PO60384 105 aa9.41□□□□□ -0.9
CTNNA1-236ENST00000522792 IGLV7-43P04211 117 aa9.41□□□□□ -0.9
CTNNA1-236ENST00000522792 DSCR8Q96T75 97 aa9.41□□□□□ -0.9
CTNNA1-236ENST00000522792 SMIM29Q86T20 159 aa9.41□□□□□ -0.9
CTNNA1-236ENST00000522792 SRRM2Q9UQ35 2752 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-236ENST00000522792 FAM240AA0A1B0GVK7 77 aa9.39□□□□□ -0.91
CTNNA1-236ENST00000522792 CCKP06307 115 aa9.39□□□□□ -0.91
CTNNA1-236ENST00000522792 Q6ZQT0 140 aa9.39□□□□□ -0.91
CTNNA1-236ENST00000522792 LOC110117498A0A087WWA1 95 aa9.38□□□□□ -0.91
CTNNA1-236ENST00000522792 TRBV7-4A0A0J9YYF1 115 aa9.38□□□□□ -0.91
CTNNA1-236ENST00000522792 CCDC179H3BU77 68 aa9.38□□□□□ -0.91
CTNNA1-236ENST00000522792 SPRR4Q96PI1 79 aa9.36□□□□□ -0.91
CTNNA1-236ENST00000522792 F8WEM9 126 aa9.36□□□□□ -0.91
CTNNA1-236ENST00000522792 SPRR1BP22528 89 aa9.36□□□□□ -0.91
CTNNA1-236ENST00000522792 SMR3BP02814 79 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-236ENST00000522792 ACYP1P07311 99 aa9.33□□□□□ -0.92
CTNNA1-236ENST00000522792 ZNF706Q9Y5V0 76 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-236ENST00000522792 PDE6GP18545 87 aa9.32□□□□□ -0.92
CTNNA1-236ENST00000522792 A0A0G2JQZ4 141 aa9.32□□□□□ -0.92
CTNNA1-236ENST00000522792 TRBV7-7A0A0K0K1E9 115 aa9.32□□□□□ -0.92
CTNNA1-236ENST00000522792 ANAPC11Q9NYG5 84 aa9.32□□□□□ -0.92
CTNNA1-236ENST00000522792 APOBP04114 4563 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-236ENST00000522792 LINC00846Q9NV44 126 aa9.31□□□□□ -0.92
CTNNA1-236ENST00000522792 LINC00483Q53H64 154 aa9.3□□□□□ -0.92
CTNNA1-236ENST00000522792 RPL37AP61513 92 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-236ENST00000522792 IGLV9-49A0A0B4J1Y8 123 aa9.28□□□□□ -0.92
CTNNA1-236ENST00000522792 IGFL1Q6UW32 110 aa9.27□□□□□ -0.92
CTNNA1-236ENST00000522792 VPS13BQ7Z7G8 4022 aa9.27□□□□□ -0.92
CTNNA1-236ENST00000522792 IGLV8-61A0A075B6I0 122 aa9.27□□□□□ -0.93
CTNNA1-236ENST00000522792 A0A1W2PNM2 257 aa9.27□□□□□ -0.93
CTNNA1-236ENST00000522792 FAM229AH3BQW9 127 aa9.26□□□□□ -0.93
CTNNA1-236ENST00000522792 C9orf153Q5TBE3 101 aa9.26□□□□□ -0.93
CTNNA1-236ENST00000522792 IMUPQ9GZP8 106 aa9.25□□□□□ -0.93
CTNNA1-236ENST00000522792 Q8NBF4 154 aa9.24□□□□□ -0.93
CTNNA1-236ENST00000522792 C5orf47Q569G3 176 aa9.24□□□□□ -0.93
CTNNA1-236ENST00000522792 MOBPQ13875 183 aa9.22□□□□□ -0.93
CTNNA1-236ENST00000522792 Q6JHZ5 121 aa9.21□□□□□ -0.93
CTNNA1-236ENST00000522792 LINC00643Q86TS7 51 aa9.21□□□□□ -0.94
CTNNA1-236ENST00000522792 UBL5Q9BZL1 73 aa9.21□□□□□ -0.94
CTNNA1-236ENST00000522792 FAM236AA0A1B0GUQ0 79 aa9.2□□□□□ -0.94
CTNNA1-236ENST00000522792 FAM236BA0A1B0GV22 79 aa9.2□□□□□ -0.94
CTNNA1-236ENST00000522792 Q6ZVQ6 151 aa9.19□□□□□ -0.94
CTNNA1-236ENST00000522792 CRYGAP11844 174 aa9.17□□□□□ -0.94
CTNNA1-236ENST00000522792 FAT1Q14517 4588 aa9.17□□□□□ -0.94
CTNNA1-236ENST00000522792 KRTAP10-4P60372 401 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-236ENST00000522792 IGKV3D-7A0A0C4DH55 119 aa9.16□□□□□ -0.94
CTNNA1-236ENST00000522792 SPINK6Q6UWN8 80 aa9.16□□□□□ -0.94
CTNNA1-236ENST00000522792 A0A087X002 238 aa9.15□□□□□ -0.94
CTNNA1-236ENST00000522792 KRTAP1-4P0C5Y4 121 aa9.15□□□□□ -0.94
CTNNA1-236ENST00000522792 HRCT1Q6UXD1 115 aa9.15□□□□□ -0.94
CTNNA1-236ENST00000522792 A0A087WSZ3 146 aa9.14□□□□□ -0.95
CTNNA1-236ENST00000522792 J3KT08 172 aa9.14□□□□□ -0.95
CTNNA1-236ENST00000522792 UQCRQO14949 82 aa9.14□□□□□ -0.95
CTNNA1-236ENST00000522792 CDK2AP2O75956 126 aa9.14□□□□□ -0.95
CTNNA1-236ENST00000522792 NREPQ16612 68 aa9.14□□□□□ -0.95
CTNNA1-236ENST00000522792 A0A1B0GW54 56 aa9.13□□□□□ -0.95
CTNNA1-236ENST00000522792 EPPK1P58107 5090 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-236ENST00000522792 RPS28P62857 69 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-236ENST00000522792 FAM229BQ4G0N7 80 aa9.12□□□□□ -0.95
CTNNA1-236ENST00000522792 KRTAP13-2Q52LG2 175 aa9.12□□□□□ -0.95
CTNNA1-236ENST00000522792 HSPG2P98160 4391 aa9.12□□□□□ -0.95
CTNNA1-236ENST00000522792 PLA2G1BP04054 148 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-236ENST00000522792 HIST1H4AP62805 103 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-236ENST00000522792 Q5VSD8 79 aa9.07□□□□□ -0.96
CTNNA1-236ENST00000522792 ATP5EP2Q5VTU8 51 aa9.07□□□□□ -0.96
CTNNA1-236ENST00000522792 SSBP3-AS1Q7Z2R9 100 aa9.07□□□□□ -0.96
CTNNA1-236ENST00000522792 RYR1P21817 5038 aa9.07□□□□□ -0.96
CTNNA1-236ENST00000522792 COX7CP15954 63 aa9.07□□□□□ -0.96
CTNNA1-236ENST00000522792 DEFB116Q30KQ4 102 aa9.05□□□□□ -0.96
CTNNA1-236ENST00000522792 ATOX1O00244 68 aa9.04□□□□□ -0.96
CTNNA1-236ENST00000522792 BPY2O14599 106 aa9.04□□□□□ -0.96
CTNNA1-236ENST00000522792 KRTAP17-1Q9BYP8 105 aa9.04□□□□□ -0.96
CTNNA1-236ENST00000522792 PRR26Q8N8Z3 221 aa9.04□□□□□ -0.96
CTNNA1-236ENST00000522792 CXCL6P80162 114 aa9.03□□□□□ -0.96
CTNNA1-236ENST00000522792 A0A087WVE0 104 aa9.02□□□□□ -0.97
CTNNA1-236ENST00000522792 TYMSOSQ8TAI1 123 aa9.02□□□□□ -0.97
CTNNA1-236ENST00000522792 KIAA1109Q2LD37 5005 aa9.02□□□□□ -0.97
CTNNA1-236ENST00000522792 Q8N9L7 120 aa9.02□□□□□ -0.97
CTNNA1-236ENST00000522792 PKHD1L1Q86WI1 4243 aa9.01□□□□□ -0.97
CTNNA1-236ENST00000522792 CD164Q04900 197 aa8.98□□□□□ -0.97
CTNNA1-236ENST00000522792 LINC00472Q9H8W2 130 aa8.97□□□□□ -0.97
CTNNA1-236ENST00000522792 DSCR10P59022 87 aa8.97□□□□□ -0.97
CTNNA1-236ENST00000522792 TMEM258P61165 79 aa8.97□□□□□ -0.97
CTNNA1-236ENST00000522792 CYSTM1Q9H1C7 97 aa8.95□□□□□ -0.98
CTNNA1-236ENST00000522792 SERP2Q8N6R1 65 aa8.95□□□□□ -0.98
CTNNA1-236ENST00000522792 Q96NJ1 140 aa8.95□□□□□ -0.98
CTNNA1-236ENST00000522792 IGKV4-1P06312 121 aa8.94□□□□□ -0.98
CTNNA1-236ENST00000522792 Q8N1X5 172 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms