RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 IGLV8-61A0A075B6I0 122 aa11.7□□□□□ -0.54
HOXA3-204ENST00000521401 CFC1BP0CG36 223 aa11.7□□□□□ -0.54
HOXA3-204ENST00000521401 CFC1P0CG37 223 aa11.7□□□□□ -0.54
HOXA3-204ENST00000521401 SPATA45Q537H7 98 aa11.7□□□□□ -0.54
HOXA3-204ENST00000521401 F8WEM9 126 aa11.69□□□□□ -0.54
HOXA3-204ENST00000521401 BVES-AS1Q5T3Y7 98 aa11.69□□□□□ -0.54
HOXA3-204ENST00000521401 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.69□□□□□ -0.54
HOXA3-204ENST00000521401 HIGD1BQ9P298 99 aa11.69□□□□□ -0.54
HOXA3-204ENST00000521401 C2orf91Q6ZV80 131 aa11.68□□□□□ -0.54
HOXA3-204ENST00000521401 PCOTHQ58A44 107 aa11.66□□□□□ -0.54
HOXA3-204ENST00000521401 OCIAD2Q56VL3 154 aa11.65□□□□□ -0.54
HOXA3-204ENST00000521401 Q6JHZ5 121 aa11.65□□□□□ -0.54
HOXA3-204ENST00000521401 IGFL1Q6UW32 110 aa11.65□□□□□ -0.54
HOXA3-204ENST00000521401 TCL1BO95988 128 aa11.64□□□□□ -0.55
HOXA3-204ENST00000521401 VAMP8Q9BV40 100 aa11.64□□□□□ -0.55
HOXA3-204ENST00000521401 A0A0B4J2C4 111 aa11.63□□□□□ -0.55
HOXA3-204ENST00000521401 PPDPFLQ8WWR9 84 aa11.63□□□□□ -0.55
HOXA3-204ENST00000521401 CLEC2BQ92478 149 aa11.63□□□□□ -0.55
HOXA3-204ENST00000521401 RAB37Q96AX2 223 aa11.62□□□□□ -0.55
HOXA3-204ENST00000521401 KRTAP9-2Q9BYQ4 174 aa11.62□□□□□ -0.55
HOXA3-204ENST00000521401 TRBV7-7A0A0K0K1E9 115 aa11.61□□□□□ -0.55
HOXA3-204ENST00000521401 FAM218AQ96MZ4 157 aa11.59□□□□□ -0.55
HOXA3-204ENST00000521401 KRTAP19-2Q3LHN2 52 aa11.58□□□□□ -0.56
HOXA3-204ENST00000521401 LCE2CQ5TA81 110 aa11.58□□□□□ -0.56
HOXA3-204ENST00000521401 CEND1Q8N111 149 aa11.58□□□□□ -0.56
HOXA3-204ENST00000521401 SNHG12Q9BXW3 62 aa11.57□□□□□ -0.56
HOXA3-204ENST00000521401 H0YGX0 51 aa11.56□□□□□ -0.56
HOXA3-204ENST00000521401 H3BUT2 72 aa11.55□□□□□ -0.56
HOXA3-204ENST00000521401 RPL37P61927 97 aaKnown RBP11.54□□□□□ -0.56
HOXA3-204ENST00000521401 FXYD2P54710 66 aa11.53□□□□□ -0.56
HOXA3-204ENST00000521401 PYY3Q5JQD4 70 aa11.52□□□□□ -0.57
HOXA3-204ENST00000521401 PRO1854Q9UHT4 67 aa11.51□□□□□ -0.57
HOXA3-204ENST00000521401 TMEM238LA0A1B0GVL6 79 aa11.48□□□□□ -0.57
HOXA3-204ENST00000521401 A6NJY4 79 aa11.48□□□□□ -0.57
HOXA3-204ENST00000521401 SNCGO76070 127 aa11.48□□□□□ -0.57
HOXA3-204ENST00000521401 A0A1B0GX51 115 aa11.47□□□□□ -0.57
HOXA3-204ENST00000521401 NDUFV3P56181 108 aaKnown RBP11.47□□□□□ -0.57
HOXA3-204ENST00000521401 Q6Q795 121 aa11.46□□□□□ -0.57
HOXA3-204ENST00000521401 TRIAP1O43715 76 aa11.44□□□□□ -0.58
HOXA3-204ENST00000521401 LST1O00453 97 aa11.42□□□□□ -0.58
HOXA3-204ENST00000521401 HSD52Q0P140 79 aa11.42□□□□□ -0.58
HOXA3-204ENST00000521401 MT1HP80294 61 aa11.41□□□□□ -0.58
HOXA3-204ENST00000521401 TEN1Q86WV5 123 aa11.41□□□□□ -0.58
HOXA3-204ENST00000521401 H3BMG7 143 aa11.39□□□□□ -0.59
HOXA3-204ENST00000521401 OBSCN-AS1Q96MR7 158 aa11.39□□□□□ -0.59
HOXA3-204ENST00000521401 K7ERJ3 54 aa11.38□□□□□ -0.59
HOXA3-204ENST00000521401 FABP2P12104 132 aa11.38□□□□□ -0.59
HOXA3-204ENST00000521401 GHRHP01286 108 aa11.37□□□□□ -0.59
HOXA3-204ENST00000521401 SS18L2Q9UHA2 77 aa11.37□□□□□ -0.59
HOXA3-204ENST00000521401 A0A087WSZ3 146 aa11.35□□□□□ -0.59
HOXA3-204ENST00000521401 Q75L30 129 aa11.35□□□□□ -0.59
HOXA3-204ENST00000521401 TMA7Q9Y2S6 64 aaKnown RBP11.34□□□□□ -0.59
HOXA3-204ENST00000521401 A0A1W2PNM2 257 aa11.33□□□□□ -0.6
HOXA3-204ENST00000521401 Q96NJ1 140 aa11.33□□□□□ -0.6
HOXA3-204ENST00000521401 UQCR10Q9UDW1 63 aa11.32□□□□□ -0.6
HOXA3-204ENST00000521401 PSMB2P49721 201 aa11.3□□□□□ -0.6
HOXA3-204ENST00000521401 LCE2DQ5TA82 110 aaPredicted RBP11.29□□□□□ -0.6
HOXA3-204ENST00000521401 ORMDL1Q9P0S3 153 aa11.29□□□□□ -0.6
HOXA3-204ENST00000521401 FLGP20930 4061 aaPredicted RBP11.29□□□□□ -0.6
HOXA3-204ENST00000521401 DNAL4O96015 105 aa11.28□□□□□ -0.6
HOXA3-204ENST00000521401 ATP11AUNQ6ZP68 121 aa11.26□□□□□ -0.61
HOXA3-204ENST00000521401 H3BQ85 93 aa11.25□□□□□ -0.61
HOXA3-204ENST00000521401 COX6CP09669 75 aa11.25□□□□□ -0.61
HOXA3-204ENST00000521401 C20orf166-AS1Q96NR2 134 aa11.25□□□□□ -0.61
HOXA3-204ENST00000521401 ANKRD29Q8N6D5 301 aa11.24□□□□□ -0.61
HOXA3-204ENST00000521401 KRTAP9-6A0A140TA67 174 aa11.23□□□□□ -0.61
HOXA3-204ENST00000521401 A0A1B0GV72 72 aa11.23□□□□□ -0.61
HOXA3-204ENST00000521401 TMEM256-PLSCR3K7ERE1 68 aa11.23□□□□□ -0.61
HOXA3-204ENST00000521401 TRBV7-4A0A0J9YYF1 115 aa11.22□□□□□ -0.61
HOXA3-204ENST00000521401 A8MUU9 505 aa11.22□□□□□ -0.61
HOXA3-204ENST00000521401 LORP23490 312 aaPredicted RBP11.19□□□□□ -0.62
HOXA3-204ENST00000521401 UBE2V1Q13404 147 aa11.19□□□□□ -0.62
HOXA3-204ENST00000521401 COX6B2Q6YFQ2 88 aa11.19□□□□□ -0.62
HOXA3-204ENST00000521401 TRACP01848 142 aa11.18□□□□□ -0.62
HOXA3-204ENST00000521401 DSCR10P59022 87 aa11.18□□□□□ -0.62
HOXA3-204ENST00000521401 KRTAP10-6P60371 365 aaPredicted RBP11.18□□□□□ -0.62
HOXA3-204ENST00000521401 SIGMAR1Q99720 223 aa11.15□□□□□ -0.62
HOXA3-204ENST00000521401 CCKP06307 115 aa11.14□□□□□ -0.63
HOXA3-204ENST00000521401 LINC00472Q9H8W2 130 aa11.14□□□□□ -0.63
HOXA3-204ENST00000521401 IGKV4-1P06312 121 aa11.13□□□□□ -0.63
HOXA3-204ENST00000521401 SCGB1C2P0DMR2 95 aa11.13□□□□□ -0.63
HOXA3-204ENST00000521401 KRTAP16-1A8MUX0 517 aa11.1□□□□□ -0.63
HOXA3-204ENST00000521401 M0R2T5 61 aa11.1□□□□□ -0.63
HOXA3-204ENST00000521401 LINC00313P59037 77 aa11.09□□□□□ -0.63
HOXA3-204ENST00000521401 DEFB116Q30KQ4 102 aa11.09□□□□□ -0.63
HOXA3-204ENST00000521401 NOTCH2NLQ7Z3S9 236 aa11.09□□□□□ -0.63
HOXA3-204ENST00000521401 FSIP2Q5CZC0 6907 aa11.07□□□□□ -0.64
HOXA3-204ENST00000521401 RBM3P98179 157 aaKnown RBP11.06□□□□□ -0.64
HOXA3-204ENST00000521401 BAALC-AS2P0C853 105 aa11.04□□□□□ -0.64
HOXA3-204ENST00000521401 DSCR8Q96T75 97 aa11.02□□□□□ -0.65
HOXA3-204ENST00000521401 VPS25Q9BRG1 176 aa11.02□□□□□ -0.65
HOXA3-204ENST00000521401 M0R143 59 aa10.99□□□□□ -0.65
HOXA3-204ENST00000521401 NAA38Q9BRA0 125 aaKnown RBP10.99□□□□□ -0.65
HOXA3-204ENST00000521401 IGHV6-1A0A0B4J1U7 121 aa10.98□□□□□ -0.65
HOXA3-204ENST00000521401 CRCT1Q9UGL9 99 aa10.97□□□□□ -0.65
HOXA3-204ENST00000521401 C9JAW5 83 aa10.95□□□□□ -0.66
HOXA3-204ENST00000521401 ATXN8Q156A1 80 aa10.95□□□□□ -0.66
HOXA3-204ENST00000521401 A0A1B0GVX0 72 aa10.94□□□□□ -0.66
HOXA3-204ENST00000521401 SMIM6P0DI80 62 aa10.94□□□□□ -0.66
HOXA3-204ENST00000521401 TRBV20-1A0A075B6N2 111 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms