RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 H3BVH4 76 aa0.06□□□□□ -2.4
PTPN12-214ENST00000520947 PDCD5O14737 125 aa0.06□□□□□ -2.4
PTPN12-214ENST00000520947 DDX60LQ5H9U9 1706 aaKnown RBP0.06□□□□□ -2.4
PTPN12-214ENST00000520947 DUOX2Q9NRD8 1548 aa0.06□□□□□ -2.4
PTPN12-214ENST00000520947 FLNBO75369 2602 aaKnown RBP0.05□□□□□ -2.4
PTPN12-214ENST00000520947 ACANP16112 2415 aa0.05□□□□□ -2.4
PTPN12-214ENST00000520947 COL6A3P12111 3177 aa0.05□□□□□ -2.4
PTPN12-214ENST00000520947 UBL5Q9BZL1 73 aa0.05□□□□□ -2.4
PTPN12-214ENST00000520947 KCNQ1DNQ9H478 68 aa0.05□□□□□ -2.4
PTPN12-214ENST00000520947 HECTD1Q9ULT8 2610 aa0.05□□□□□ -2.4
PTPN12-214ENST00000520947 HECTD4Q9Y4D8 3996 aa0.05□□□□□ -2.4
PTPN12-214ENST00000520947 H0YAA0 97 aa0.04□□□□□ -2.4
PTPN12-214ENST00000520947 H0YGG7 62 aa0.04□□□□□ -2.4
PTPN12-214ENST00000520947 HMCN2Q8NDA2 5059 aa0.04□□□□□ -2.4
PTPN12-214ENST00000520947 KMT2CQ8NEZ4 4911 aaKnown RBP0.03□□□□□ -2.4
PTPN12-214ENST00000520947 PCNX1Q96RV3 2341 aa0.03□□□□□ -2.4
PTPN12-214ENST00000520947 CDC42BPGQ6DT37 1551 aa0.03□□□□□ -2.4
PTPN12-214ENST00000520947 RNF17Q9BXT8 1623 aaKnown RBP0.03□□□□□ -2.4
PTPN12-214ENST00000520947 LYNX1G3V0Z9 82 aa0.03□□□□□ -2.4
PTPN12-214ENST00000520947 TENM2Q9NT68 2774 aa0.02□□□□□ -2.41
PTPN12-214ENST00000520947 RYR2Q92736 4967 aa0.02□□□□□ -2.41
PTPN12-214ENST00000520947 PDE4DIPQ5VU43 2346 aa0.02□□□□□ -2.41
PTPN12-214ENST00000520947 DEFA5Q01523 94 aa0.01□□□□□ -2.41
PTPN12-214ENST00000520947 ENHOQ6UWT2 76 aa0.01□□□□□ -2.41
PTPN12-214ENST00000520947 ATXN8Q156A1 80 aa0□□□□□ -2.41
PTPN12-214ENST00000520947 ITSN1Q15811 1721 aa0□□□□□ -2.41
PTPN12-214ENST00000520947 PARP4Q9UKK3 1724 aaKnown RBP0□□□□□ -2.41
PTPN12-214ENST00000520947 DIP2AQ14689 1571 aa-0.02□□□□□ -2.41
PTPN12-214ENST00000520947 INO80Q9ULG1 1556 aaPredicted RBP-0.02□□□□□ -2.41
PTPN12-214ENST00000520947 ASXL1Q8IXJ9 1541 aa-0.02□□□□□ -2.41
PTPN12-214ENST00000520947 HIVEP1P15822 2718 aa-0.02□□□□□ -2.41
PTPN12-214ENST00000520947 RNF213Q63HN8 5207 aa-0.02□□□□□ -2.41
PTPN12-214ENST00000520947 RYR3Q15413 4870 aa-0.02□□□□□ -2.41
PTPN12-214ENST00000520947 ZANQ9Y493 2812 aa-0.02□□□□□ -2.41
PTPN12-214ENST00000520947 NHSQ6T4R5 1651 aa-0.02□□□□□ -2.41
PTPN12-214ENST00000520947 SPTBN4Q9H254 2564 aa-0.02□□□□□ -2.41
PTPN12-214ENST00000520947 LRP2P98164 4655 aa-0.03□□□□□ -2.41
PTPN12-214ENST00000520947 HILPDAQ9Y5L2 63 aa-0.03□□□□□ -2.41
PTPN12-214ENST00000520947 ZC3H13Q5T200 1668 aaKnown RBP-0.03□□□□□ -2.41
PTPN12-214ENST00000520947 ABCA9Q8IUA7 1624 aa-0.03□□□□□ -2.41
PTPN12-214ENST00000520947 RYR1P21817 5038 aa-0.04□□□□□ -2.42
PTPN12-214ENST00000520947 IAPPP10997 89 aa-0.04□□□□□ -2.42
PTPN12-214ENST00000520947 KIAA0586Q9BVV6 1533 aa-0.04□□□□□ -2.42
PTPN12-214ENST00000520947 SONP18583 2426 aaKnown RBP-0.04□□□□□ -2.42
PTPN12-214ENST00000520947 DEFB114Q30KQ6 69 aa-0.05□□□□□ -2.42
PTPN12-214ENST00000520947 GNG13Q9P2W3 67 aa-0.05□□□□□ -2.42
PTPN12-214ENST00000520947 TJP1Q07157 1748 aa-0.05□□□□□ -2.42
PTPN12-214ENST00000520947 NRAPQ86VF7 1730 aa-0.05□□□□□ -2.42
PTPN12-214ENST00000520947 DOPEY1Q5JWR5 2465 aa-0.06□□□□□ -2.42
PTPN12-214ENST00000520947 MAP1AP78559 2803 aaPredicted RBP-0.06□□□□□ -2.42
PTPN12-214ENST00000520947 ETDCA0A1B0GVM5 59 aa-0.06□□□□□ -2.42
PTPN12-214ENST00000520947 DSPP15924 2871 aaKnown RBP-0.06□□□□□ -2.42
PTPN12-214ENST00000520947 ABCA13Q86UQ4 5058 aa-0.07□□□□□ -2.42
PTPN12-214ENST00000520947 DEFB130BP0DP73 79 aa-0.07□□□□□ -2.42
PTPN12-214ENST00000520947 DEFB130AP0DP74 79 aa-0.07□□□□□ -2.42
PTPN12-214ENST00000520947 SPRR2AP35326 72 aa-0.07□□□□□ -2.42
PTPN12-214ENST00000520947 STAB2Q8WWQ8 2551 aa-0.07□□□□□ -2.42
PTPN12-214ENST00000520947 SETD2Q9BYW2 2564 aaPredicted RBP-0.07□□□□□ -2.42
PTPN12-214ENST00000520947 PRRC2CQ9Y520 2896 aaKnown RBP-0.08□□□□□ -2.42
PTPN12-214ENST00000520947 UBR4Q5T4S7 5183 aa-0.08□□□□□ -2.42
PTPN12-214ENST00000520947 EFCAB5A4FU69 1503 aa-0.08□□□□□ -2.42
PTPN12-214ENST00000520947 TNRC18O15417 2968 aaPredicted RBP-0.09□□□□□ -2.42
PTPN12-214ENST00000520947 NBASA2RRP1 2371 aa-0.1□□□□□ -2.42
PTPN12-214ENST00000520947 CRIP1P50238 77 aa-0.1□□□□□ -2.43
PTPN12-214ENST00000520947 USH2AO75445 5202 aa-0.1□□□□□ -2.43
PTPN12-214ENST00000520947 TEP1Q99973 2627 aaKnown RBP-0.1□□□□□ -2.43
PTPN12-214ENST00000520947 C3P01024 1663 aa-0.11□□□□□ -2.43
PTPN12-214ENST00000520947 PDZD2O15018 2839 aa-0.11□□□□□ -2.43
PTPN12-214ENST00000520947 HYDINQ4G0P3 5121 aa-0.11□□□□□ -2.43
PTPN12-214ENST00000520947 NBEAL2Q6ZNJ1 2754 aa-0.11□□□□□ -2.43
PTPN12-214ENST00000520947 DNMBPQ6XZF7 1577 aa-0.11□□□□□ -2.43
PTPN12-214ENST00000520947 KIAA1109Q2LD37 5005 aa-0.11□□□□□ -2.43
PTPN12-214ENST00000520947 NBEAL1Q6ZS30 2694 aa-0.11□□□□□ -2.43
PTPN12-214ENST00000520947 PRLHP81277 87 aa-0.12□□□□□ -2.43
PTPN12-214ENST00000520947 MROH1Q8NDA8 1641 aa-0.13□□□□□ -2.43
PTPN12-214ENST00000520947 NF1P21359 2839 aa-0.13□□□□□ -2.43
PTPN12-214ENST00000520947 KRTAP6-2Q3LI66 62 aa-0.14□□□□□ -2.43
PTPN12-214ENST00000520947 ABCC6O95255 1503 aa-0.14□□□□□ -2.43
PTPN12-214ENST00000520947 FAT3Q8TDW7 4589 aa-0.14□□□□□ -2.43
PTPN12-214ENST00000520947 SRRM2Q9UQ35 2752 aaKnown RBP-0.14□□□□□ -2.43
PTPN12-214ENST00000520947 PKHD1P08F94 4074 aa-0.14□□□□□ -2.43
PTPN12-214ENST00000520947 MADDQ8WXG6 1647 aa-0.15□□□□□ -2.43
PTPN12-214ENST00000520947 C9orf92A6NGG3 77 aa-0.15□□□□□ -2.43
PTPN12-214ENST00000520947 LRP1BQ9NZR2 4599 aa-0.15□□□□□ -2.43
PTPN12-214ENST00000520947 EPPK1P58107 5090 aaKnown RBP-0.16□□□□□ -2.43
PTPN12-214ENST00000520947 ITSN2Q9NZM3 1697 aa-0.16□□□□□ -2.44
PTPN12-214ENST00000520947 KRTAP6-1Q3LI64 71 aa-0.16□□□□□ -2.44
PTPN12-214ENST00000520947 BPTFQ12830 3046 aa-0.16□□□□□ -2.44
PTPN12-214ENST00000520947 HERC1Q15751 4861 aa-0.16□□□□□ -2.44
PTPN12-214ENST00000520947 A0A087WWC5 75 aa-0.17□□□□□ -2.44
PTPN12-214ENST00000520947 MINOS1Q5TGZ0 78 aa-0.17□□□□□ -2.44
PTPN12-214ENST00000520947 TGP01266 2768 aa-0.17□□□□□ -2.44
PTPN12-214ENST00000520947 FLGP20930 4061 aaPredicted RBP-0.18□□□□□ -2.44
PTPN12-214ENST00000520947 EPG5Q9HCE0 2579 aa-0.18□□□□□ -2.44
PTPN12-214ENST00000520947 DEFB106AQ8N104 65 aa-0.18□□□□□ -2.44
PTPN12-214ENST00000520947 CEP290O15078 2479 aa-0.18□□□□□ -2.44
PTPN12-214ENST00000520947 LINC01549A6NIU2 74 aa-0.19□□□□□ -2.44
PTPN12-214ENST00000520947 H3BNG1 76 aa-0.19□□□□□ -2.44
PTPN12-214ENST00000520947 SPRR2EP22531 72 aa-0.19□□□□□ -2.44
PTPN12-214ENST00000520947 S4R3F8 94 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms