RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 SPTSSBQ8NFR3 76 aa4.35□□□□□ -1.71
CTNNA1-225ENST00000520865 NOTCH1P46531 2555 aa4.35□□□□□ -1.71
CTNNA1-225ENST00000520865 IGLV4-60A0A075B6I1 120 aa4.34□□□□□ -1.71
CTNNA1-225ENST00000520865 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-225ENST00000520865 LINC00959A0A1B0GUT2 108 aa4.34□□□□□ -1.71
CTNNA1-225ENST00000520865 A6NDX4 124 aa4.34□□□□□ -1.71
CTNNA1-225ENST00000520865 IGKV3-20P01619 116 aa4.34□□□□□ -1.71
CTNNA1-225ENST00000520865 PRM2P04554 102 aa4.34□□□□□ -1.71
CTNNA1-225ENST00000520865 KRTAP10-3P60369 221 aa4.34□□□□□ -1.71
CTNNA1-225ENST00000520865 Q8NBF4 154 aa4.34□□□□□ -1.71
CTNNA1-225ENST00000520865 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
CTNNA1-225ENST00000520865 PRKDCP78527 4128 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-225ENST00000520865 VWFP04275 2813 aa4.33□□□□□ -1.72
CTNNA1-225ENST00000520865 CMYA5Q8N3K9 4069 aa4.33□□□□□ -1.72
CTNNA1-225ENST00000520865 PRB2P02812 416 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-225ENST00000520865 SCXQ7RTU7 201 aa4.33□□□□□ -1.72
CTNNA1-225ENST00000520865 LINC01006Q8NI28 216 aa4.33□□□□□ -1.72
CTNNA1-225ENST00000520865 WNK1Q9H4A3 2382 aa4.33□□□□□ -1.72
CTNNA1-225ENST00000520865 A0A0J9YWU9 116 aa4.32□□□□□ -1.72
CTNNA1-225ENST00000520865 LRCOL1A6NCL2 159 aa4.32□□□□□ -1.72
CTNNA1-225ENST00000520865 C3orf84H3BNL1 204 aa4.32□□□□□ -1.72
CTNNA1-225ENST00000520865 H3BUX3 64 aa4.32□□□□□ -1.72
CTNNA1-225ENST00000520865 CASC2Q6XLA1 102 aa4.32□□□□□ -1.72
CTNNA1-225ENST00000520865 LINC01558Q9Y6Z2 57 aa4.32□□□□□ -1.72
CTNNA1-225ENST00000520865 IGLV5-48A0A075B6I7 105 aa4.31□□□□□ -1.72
CTNNA1-225ENST00000520865 IGLV7-46A0A075B6I9 117 aa4.31□□□□□ -1.72
CTNNA1-225ENST00000520865 GVQW2A0A096LPI5 108 aaPredicted RBP4.31□□□□□ -1.72
CTNNA1-225ENST00000520865 CMC4P56277 68 aaPredicted RBP4.31□□□□□ -1.72
CTNNA1-225ENST00000520865 LINC01554Q52M75 96 aa4.31□□□□□ -1.72
CTNNA1-225ENST00000520865 KRTAP1-5Q9BYS1 174 aa4.31□□□□□ -1.72
CTNNA1-225ENST00000520865 HTN1P15515 57 aa4.3□□□□□ -1.72
CTNNA1-225ENST00000520865 CNBPP62633 177 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-225ENST00000520865 MOBPQ13875 183 aa4.3□□□□□ -1.72
CTNNA1-225ENST00000520865 C14orf177Q52M58 125 aa4.3□□□□□ -1.72
CTNNA1-225ENST00000520865 C10orf99Q6UWK7 81 aa4.3□□□□□ -1.72
CTNNA1-225ENST00000520865 KRTAP7-1Q8IUC3 87 aa4.3□□□□□ -1.72
CTNNA1-225ENST00000520865 WFDC10AQ9H1F0 79 aa4.3□□□□□ -1.72
CTNNA1-225ENST00000520865 PLAC8Q9NZF1 115 aa4.3□□□□□ -1.72
CTNNA1-225ENST00000520865 TRGV1A0A0A0MS02 117 aa4.29□□□□□ -1.72
CTNNA1-225ENST00000520865 TRGV4A0A0C4DH28 118 aa4.29□□□□□ -1.72
CTNNA1-225ENST00000520865 DEFB131AP59861 70 aa4.29□□□□□ -1.72
CTNNA1-225ENST00000520865 REG3GQ6UW15 175 aa4.29□□□□□ -1.72
CTNNA1-225ENST00000520865 LINC00612Q8N6U2 182 aa4.29□□□□□ -1.72
CTNNA1-225ENST00000520865 C16orf74Q96GX8 76 aa4.28□□□□□ -1.72
CTNNA1-225ENST00000520865 SPRR4Q96PI1 79 aa4.28□□□□□ -1.72
CTNNA1-225ENST00000520865 RPL37AP8A6NKH3 93 aa4.27□□□□□ -1.73
CTNNA1-225ENST00000520865 PRR3P79522 188 aaKnown RBP4.27□□□□□ -1.73
CTNNA1-225ENST00000520865 Q8N9L7 120 aa4.27□□□□□ -1.73
CTNNA1-225ENST00000520865 SPAG11BQ08648 103 aa4.26□□□□□ -1.73
CTNNA1-225ENST00000520865 KPRPQ5T749 579 aaPredicted RBP4.26□□□□□ -1.73
CTNNA1-225ENST00000520865 ZNF702PQ9H963 129 aa4.26□□□□□ -1.73
CTNNA1-225ENST00000520865 NBEAL2Q6ZNJ1 2754 aa4.25□□□□□ -1.73
CTNNA1-225ENST00000520865 KRTAP16-1A8MUX0 517 aa4.25□□□□□ -1.73
CTNNA1-225ENST00000520865 Q8N377 158 aa4.24□□□□□ -1.73
CTNNA1-225ENST00000520865 C9orf163Q8N9P6 203 aa4.24□□□□□ -1.73
CTNNA1-225ENST00000520865 DHRS4-AS1Q9P1J3 65 aa4.24□□□□□ -1.73
CTNNA1-225ENST00000520865 KLK12Q9UKR0 248 aa4.24□□□□□ -1.73
CTNNA1-225ENST00000520865 NOTCH3Q9UM47 2321 aa4.24□□□□□ -1.73
CTNNA1-225ENST00000520865 IGKV3OR2-268A0A0C4DH90 116 aa4.23□□□□□ -1.73
CTNNA1-225ENST00000520865 A8MU10 97 aa4.23□□□□□ -1.73
CTNNA1-225ENST00000520865 DSCR10P59022 87 aa4.23□□□□□ -1.73
CTNNA1-225ENST00000520865 LINC00313P59037 77 aa4.23□□□□□ -1.73
CTNNA1-225ENST00000520865 COA5Q86WW8 74 aa4.23□□□□□ -1.73
CTNNA1-225ENST00000520865 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
CTNNA1-225ENST00000520865 ST20-AS1Q8NBB2 130 aa4.22□□□□□ -1.73
CTNNA1-225ENST00000520865 IGKV2D-24A0A075B6R9 120 aa4.21□□□□□ -1.74
CTNNA1-225ENST00000520865 H0Y9P7 68 aa4.21□□□□□ -1.74
CTNNA1-225ENST00000520865 K7EIL1 84 aa4.21□□□□□ -1.74
CTNNA1-225ENST00000520865 CHCHD10Q8WYQ3 142 aaPredicted RBP4.21□□□□□ -1.74
CTNNA1-225ENST00000520865 RETNLBQ9BQ08 111 aa4.21□□□□□ -1.74
CTNNA1-225ENST00000520865 KMT2CQ8NEZ4 4911 aaKnown RBP4.21□□□□□ -1.74
CTNNA1-225ENST00000520865 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
CTNNA1-225ENST00000520865 DEFB136Q30KP8 78 aa4.2□□□□□ -1.74
CTNNA1-225ENST00000520865 C1orf137Q5JT78 98 aa4.2□□□□□ -1.74
CTNNA1-225ENST00000520865 Q8NDZ9 215 aa4.2□□□□□ -1.74
CTNNA1-225ENST00000520865 RYR3Q15413 4870 aa4.19□□□□□ -1.74
CTNNA1-225ENST00000520865 A0A1W2PNM2 257 aa4.19□□□□□ -1.74
CTNNA1-225ENST00000520865 H0Y9J4 135 aa4.19□□□□□ -1.74
CTNNA1-225ENST00000520865 EGFEM1PQ0D2K5 195 aa4.19□□□□□ -1.74
CTNNA1-225ENST00000520865 PRR4Q16378 134 aa4.19□□□□□ -1.74
CTNNA1-225ENST00000520865 Q8NAQ8 132 aa4.19□□□□□ -1.74
CTNNA1-225ENST00000520865 TP53AIP1Q9HCN2 124 aa4.19□□□□□ -1.74
CTNNA1-225ENST00000520865 NOP10Q9NPE3 64 aaKnown RBP4.19□□□□□ -1.74
CTNNA1-225ENST00000520865 K7EQZ3 153 aa4.18□□□□□ -1.74
CTNNA1-225ENST00000520865 DEFB131BA0A096LNP1 70 aa4.17□□□□□ -1.74
CTNNA1-225ENST00000520865 REG3AQ06141 175 aa4.17□□□□□ -1.74
CTNNA1-225ENST00000520865 DNAH3Q8TD57 4116 aa4.17□□□□□ -1.74
CTNNA1-225ENST00000520865 UNQ6190/PRO20217Q6UXQ8 127 aa4.16□□□□□ -1.74
CTNNA1-225ENST00000520865 PRO0255Q9UI72 69 aa4.16□□□□□ -1.74
CTNNA1-225ENST00000520865 DNAH9Q9NYC9 4486 aa4.16□□□□□ -1.74
CTNNA1-225ENST00000520865 TENM3Q9P273 2699 aa4.16□□□□□ -1.74
CTNNA1-225ENST00000520865 RTL8CO15255 209 aa4.15□□□□□ -1.75
CTNNA1-225ENST00000520865 CSNK1G2-AS1Q8NCQ2 148 aa4.15□□□□□ -1.75
CTNNA1-225ENST00000520865 C4orf3Q8WVX3 66 aa4.15□□□□□ -1.75
CTNNA1-225ENST00000520865 IGLV8-61A0A075B6I0 122 aa4.14□□□□□ -1.75
CTNNA1-225ENST00000520865 ANGP03950 147 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-225ENST00000520865 MT3P25713 68 aa4.13□□□□□ -1.75
CTNNA1-225ENST00000520865 SPINK7P58062 85 aa4.13□□□□□ -1.75
CTNNA1-225ENST00000520865 SPAG11AQ6PDA7 123 aa4.13□□□□□ -1.75
CTNNA1-225ENST00000520865 SPATA8Q6RVD6 105 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms