RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 MRPS36P82909 103 aaKnown RBP1.58□□□□□ -2.16
CTNNA1-222ENST00000520400 C9orf116Q5BN46 136 aaPredicted RBP1.58□□□□□ -2.16
CTNNA1-222ENST00000520400 TMEM170BQ5T4T1 132 aa1.58□□□□□ -2.16
CTNNA1-222ENST00000520400 C2orf82Q6UX34 121 aa1.58□□□□□ -2.16
CTNNA1-222ENST00000520400 IFI27L1Q96BM0 104 aa1.58□□□□□ -2.16
CTNNA1-222ENST00000520400 CHCHD1Q96BP2 118 aaKnown RBP1.58□□□□□ -2.16
CTNNA1-222ENST00000520400 ZNF625Q96I27 306 aaPredicted RBP1.58□□□□□ -2.16
CTNNA1-222ENST00000520400 PACRGQ96M98 296 aaPredicted RBP1.58□□□□□ -2.16
CTNNA1-222ENST00000520400 AMELXQ99217 191 aa1.58□□□□□ -2.16
CTNNA1-222ENST00000520400 CST9LQ9H4G1 147 aa1.58□□□□□ -2.16
CTNNA1-222ENST00000520400 CDKN2A-AS1Q9UH64 79 aa1.58□□□□□ -2.16
CTNNA1-222ENST00000520400 USH2AO75445 5202 aa1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 TINCRA0A1B0GVN0 87 aa1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 LINC01546A6NGU7 62 aa1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 K7EMI3 77 aa1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 S100A6P06703 90 aa1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 KRTDAPP60985 99 aa1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 UNQ6190/PRO20217Q6UXQ8 127 aa1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 SCGB1D4Q6XE38 83 aa1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 ATOH7Q8N100 152 aa1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 COX7B2Q8TF08 81 aa1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 CARD19Q96LW7 228 aa1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 MRPL35Q9NZE8 188 aaKnown RBP1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 C6orf48Q9UBA6 75 aa1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 LRP1Q07954 4544 aaKnown RBP1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 FAT3Q8TDW7 4589 aa1.57□□□□□ -2.16
CTNNA1-222ENST00000520400 A0A096LNI7 61 aa1.56□□□□□ -2.16
CTNNA1-222ENST00000520400 GVQW2A0A096LPI5 108 aaPredicted RBP1.56□□□□□ -2.16
CTNNA1-222ENST00000520400 F8VRH5 84 aa1.56□□□□□ -2.16
CTNNA1-222ENST00000520400 H3BRM9 83 aa1.56□□□□□ -2.16
CTNNA1-222ENST00000520400 NDUFA1O15239 70 aa1.56□□□□□ -2.16
CTNNA1-222ENST00000520400 C3orf79P0CE67 100 aa1.56□□□□□ -2.16
CTNNA1-222ENST00000520400 IGLC3P0DOY3 106 aa1.56□□□□□ -2.16
CTNNA1-222ENST00000520400 CKS1BP61024 79 aa1.56□□□□□ -2.16
CTNNA1-222ENST00000520400 NPC2P61916 151 aa1.56□□□□□ -2.16
CTNNA1-222ENST00000520400 SEC11AP67812 179 aa1.56□□□□□ -2.16
CTNNA1-222ENST00000520400 C9orf163Q8N9P6 203 aa1.56□□□□□ -2.16
CTNNA1-222ENST00000520400 HSPB8Q9UJY1 196 aa1.56□□□□□ -2.16
CTNNA1-222ENST00000520400 TRAV12-1A0A0B4J245 112 aa1.55□□□□□ -2.16
CTNNA1-222ENST00000520400 LOC107984640A0A0U1RRK4 108 aa1.55□□□□□ -2.16
CTNNA1-222ENST00000520400 LINC01549A6NIU2 74 aa1.55□□□□□ -2.16
CTNNA1-222ENST00000520400 SYS1-DBNDD2H3BUS1 97 aa1.55□□□□□ -2.16
CTNNA1-222ENST00000520400 DPM2O94777 84 aa1.55□□□□□ -2.16
CTNNA1-222ENST00000520400 IGKCP01834 107 aa1.55□□□□□ -2.16
CTNNA1-222ENST00000520400 MEIG1Q5JSS6 88 aa1.55□□□□□ -2.16
CTNNA1-222ENST00000520400 PHF5AQ7RTV0 110 aaKnown RBP1.55□□□□□ -2.16
CTNNA1-222ENST00000520400 FAM19A5Q7Z5A7 132 aaPredicted RBP1.55□□□□□ -2.16
CTNNA1-222ENST00000520400 Q8IZM0 81 aa1.55□□□□□ -2.16
CTNNA1-222ENST00000520400 HIST3H2BBQ8N257 126 aa1.55□□□□□ -2.16
CTNNA1-222ENST00000520400 DAND5Q8N907 189 aa1.55□□□□□ -2.16
CTNNA1-222ENST00000520400 SPACA4Q8TDM5 124 aa1.55□□□□□ -2.16
CTNNA1-222ENST00000520400 XAGE1AQ9HD64 81 aa1.55□□□□□ -2.16
CTNNA1-222ENST00000520400 IGKV2D-26A0A0A0MRZ7 120 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 TRBV30A0A0K0K1B3 111 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 C20orf202A1L168 122 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 LEPROTO15243 131 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 SMIM13P0DJ93 91 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 AKR1D1P51857 326 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 LINC00158P58513 81 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 CNBPP62633 177 aaKnown RBP1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 UBE2BP63146 152 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 LINC01545Q5VT33 79 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 PLEKHB2Q96CS7 222 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 HIST1H2BLQ99880 126 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 Q9BRP9 147 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 TTTY13Q9BZ97 58 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 PRO2289Q9P1D8 64 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 TP73-AS1Q9UF72 201 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 NDUFA12Q9UI09 145 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 MACF1Q9UPN3 7388 aaKnown RBP1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 VPS13BQ7Z7G8 4022 aa1.54□□□□□ -2.16
CTNNA1-222ENST00000520400 ZNF815PA8K554 130 aa1.53□□□□□ -2.16
CTNNA1-222ENST00000520400 J3QQQ9 107 aa1.53□□□□□ -2.16
CTNNA1-222ENST00000520400 NCR3O14931 201 aa1.53□□□□□ -2.16
CTNNA1-222ENST00000520400 PLNP26678 52 aa1.53□□□□□ -2.16
CTNNA1-222ENST00000520400 RPL37AP61513 92 aaKnown RBP1.53□□□□□ -2.16
CTNNA1-222ENST00000520400 ERG28Q9UKR5 140 aa1.53□□□□□ -2.16
CTNNA1-222ENST00000520400 MYMXA0A1B0GTQ4 84 aa1.52□□□□□ -2.17
CTNNA1-222ENST00000520400 H3BPC8 53 aa1.52□□□□□ -2.17
CTNNA1-222ENST00000520400 SPATA45Q537H7 98 aa1.52□□□□□ -2.17
CTNNA1-222ENST00000520400 C1orf137Q5JT78 98 aa1.52□□□□□ -2.17
CTNNA1-222ENST00000520400 Q6ZSA8 131 aa1.52□□□□□ -2.17
CTNNA1-222ENST00000520400 PKIGQ9Y2B9 76 aa1.52□□□□□ -2.17
CTNNA1-222ENST00000520400 C22orf24Q9Y442 160 aa1.52□□□□□ -2.17
CTNNA1-222ENST00000520400 CIRBPQ14011 172 aaKnown RBP1.51□□□□□ -2.17
CTNNA1-222ENST00000520400 JOSD1Q15040 202 aaPredicted RBP1.51□□□□□ -2.17
CTNNA1-222ENST00000520400 SOSTDC1Q6X4U4 206 aa1.51□□□□□ -2.17
CTNNA1-222ENST00000520400 OR13C6PQ8NH95 151 aa1.51□□□□□ -2.17
CTNNA1-222ENST00000520400 C14orf144Q96I85 54 aa1.51□□□□□ -2.17
CTNNA1-222ENST00000520400 C12orf57Q99622 126 aa1.51□□□□□ -2.17
CTNNA1-222ENST00000520400 MIEN1Q9BRT3 115 aa1.51□□□□□ -2.17
CTNNA1-222ENST00000520400 VAMP8Q9BV40 100 aa1.51□□□□□ -2.17
CTNNA1-222ENST00000520400 PLAC8Q9NZF1 115 aa1.51□□□□□ -2.17
CTNNA1-222ENST00000520400 LINC00474Q9P2X8 69 aa1.51□□□□□ -2.17
CTNNA1-222ENST00000520400 MUC12Q9UKN1 5478 aa1.5□□□□□ -2.17
CTNNA1-222ENST00000520400 TMEM238C9JI98 176 aa1.5□□□□□ -2.17
CTNNA1-222ENST00000520400 PRLHP81277 87 aa1.5□□□□□ -2.17
CTNNA1-222ENST00000520400 PYY3Q5JQD4 70 aa1.5□□□□□ -2.17
CTNNA1-222ENST00000520400 S100A7L2Q5SY68 101 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms