RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 IGSF10Q6WRI0 2623 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 SPTBN4Q9H254 2564 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 NCOR2Q9Y618 2525 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 CHD6Q8TD26 2715 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 USP9YO00507 2555 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P41-201ENST00000520234 TLN2Q9Y4G6 2542 aa1.74□□□□□ -2.13
HMGB1P41-201ENST00000520234 CELSR1Q9NYQ6 3014 aa1.74□□□□□ -2.13
HMGB1P41-201ENST00000520234 A8MUN3 132 aa1.74□□□□□ -2.13
HMGB1P41-201ENST00000520234 C8orf87E5RJ46 101 aa1.74□□□□□ -2.13
HMGB1P41-201ENST00000520234 NDUFS5O43920 106 aa1.74□□□□□ -2.13
HMGB1P41-201ENST00000520234 IGLV6-57P01721 117 aa1.74□□□□□ -2.13
HMGB1P41-201ENST00000520234 LINC00158P58513 81 aa1.74□□□□□ -2.13
HMGB1P41-201ENST00000520234 PRR3P79522 188 aaKnown RBP1.74□□□□□ -2.13
HMGB1P41-201ENST00000520234 HIGD2AQ9BW72 106 aa1.74□□□□□ -2.13
HMGB1P41-201ENST00000520234 PRO0255Q9UI72 69 aa1.74□□□□□ -2.13
HMGB1P41-201ENST00000520234 CHD8Q9HCK8 2581 aa1.74□□□□□ -2.13
HMGB1P41-201ENST00000520234 JMJD1CQ15652 2540 aa1.74□□□□□ -2.13
HMGB1P41-201ENST00000520234 SETXQ7Z333 2677 aaKnown RBP1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 CELSR2Q9HCU4 2923 aa1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 ALMS1Q8TCU4 4167 aa1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 UTP20O75691 2785 aaKnown RBP1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 FBN2P35556 2912 aa1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 GVQW2A0A096LPI5 108 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 PRB1P04280 392 aa1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 ELOF1P60002 83 aaKnown RBP1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 UBE2BP63146 152 aa1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 HAMPP81172 84 aa1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 MRPL55Q7Z7F7 128 aaKnown RBP1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 CIRBP-AS1Q8TBR5 109 aa1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 Q9BRP9 147 aa1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 VPS13CQ709C8 3753 aa1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 TEX15Q9BXT5 2789 aa1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 MYO9AB2RTY4 2548 aa1.73□□□□□ -2.13
HMGB1P41-201ENST00000520234 ZFYVE26Q68DK2 2539 aa1.72□□□□□ -2.13
HMGB1P41-201ENST00000520234 NAV2Q8IVL1 2488 aa1.72□□□□□ -2.13
HMGB1P41-201ENST00000520234 A0A1B0GW54 56 aa1.72□□□□□ -2.13
HMGB1P41-201ENST00000520234 H3BNG1 76 aa1.72□□□□□ -2.13
HMGB1P41-201ENST00000520234 PSPHP1O15172 72 aa1.72□□□□□ -2.13
HMGB1P41-201ENST00000520234 ZNF73O43830 326 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P41-201ENST00000520234 COX7BP24311 80 aa1.72□□□□□ -2.13
HMGB1P41-201ENST00000520234 CNBPP62633 177 aaKnown RBP1.72□□□□□ -2.13
HMGB1P41-201ENST00000520234 LELP1Q5T871 98 aa1.72□□□□□ -2.13
HMGB1P41-201ENST00000520234 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P41-201ENST00000520234 C7orf65Q6ZTY9 151 aa1.72□□□□□ -2.13
HMGB1P41-201ENST00000520234 LINC00269Q8N2A0 174 aa1.72□□□□□ -2.13
HMGB1P41-201ENST00000520234 SPANXA2-OT1Q8N9U9 137 aa1.72□□□□□ -2.13
HMGB1P41-201ENST00000520234 KCNQ1DNQ9H478 68 aa1.72□□□□□ -2.13
HMGB1P41-201ENST00000520234 ZANQ9Y493 2812 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 ACACBO00763 2458 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 IGLV5-48A0A075B6I7 105 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 A8MUU9 505 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 SPART-AS1P0CW21 52 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 DEFB130BP0DP73 79 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 DEFB130AP0DP74 79 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 C6orf99Q4VX62 202 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 SCXQ7RTU7 201 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 LIMD2Q9BT23 127 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 C8orf17Q9NRJ1 99 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 CDC42SE1Q9NRR8 79 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 COL12A1Q99715 3063 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 MYO18BQ8IUG5 2567 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 ZNF462Q96JM2 2506 aa1.71□□□□□ -2.14
HMGB1P41-201ENST00000520234 OTOGQ6ZRI0 2925 aa1.7□□□□□ -2.14
HMGB1P41-201ENST00000520234 FN1P02751 2386 aaKnown RBP1.7□□□□□ -2.14
HMGB1P41-201ENST00000520234 PDZD2O15018 2839 aa1.7□□□□□ -2.14
HMGB1P41-201ENST00000520234 HCG22E2RYF7 251 aa1.7□□□□□ -2.14
HMGB1P41-201ENST00000520234 J3QKU1 62 aa1.7□□□□□ -2.14
HMGB1P41-201ENST00000520234 KRTAP26-1Q6PEX3 210 aa1.7□□□□□ -2.14
HMGB1P41-201ENST00000520234 Q6ZQY7 126 aa1.7□□□□□ -2.14
HMGB1P41-201ENST00000520234 C9orf163Q8N9P6 203 aa1.7□□□□□ -2.14
HMGB1P41-201ENST00000520234 Q8NAQ8 132 aa1.7□□□□□ -2.14
HMGB1P41-201ENST00000520234 ST20-AS1Q8NBB2 130 aa1.7□□□□□ -2.14
HMGB1P41-201ENST00000520234 WFDC10AQ9H1F0 79 aa1.7□□□□□ -2.14
HMGB1P41-201ENST00000520234 TOMM7Q9P0U1 55 aa1.7□□□□□ -2.14
HMGB1P41-201ENST00000520234 CENPEQ02224 2701 aa1.69□□□□□ -2.14
HMGB1P41-201ENST00000520234 USP24Q9UPU5 2620 aa1.69□□□□□ -2.14
HMGB1P41-201ENST00000520234 A0A096LPF7 62 aa1.69□□□□□ -2.14
HMGB1P41-201ENST00000520234 IGKV3OR2-268A0A0C4DH90 116 aa1.69□□□□□ -2.14
HMGB1P41-201ENST00000520234 ETDCA0A1B0GVM5 59 aa1.69□□□□□ -2.14
HMGB1P41-201ENST00000520234 A0A1W2PNM2 257 aa1.69□□□□□ -2.14
HMGB1P41-201ENST00000520234 C3orf84H3BNL1 204 aa1.69□□□□□ -2.14
HMGB1P41-201ENST00000520234 ANGP03950 147 aaKnown RBP1.69□□□□□ -2.14
HMGB1P41-201ENST00000520234 ASB16-AS1Q495Z4 193 aa1.69□□□□□ -2.14
HMGB1P41-201ENST00000520234 UNQ6190/PRO20217Q6UXQ8 127 aa1.69□□□□□ -2.14
HMGB1P41-201ENST00000520234 SPRR4Q96PI1 79 aa1.69□□□□□ -2.14
HMGB1P41-201ENST00000520234 POLQO75417 2590 aa1.69□□□□□ -2.14
HMGB1P41-201ENST00000520234 LRRK2Q5S007 2527 aa1.69□□□□□ -2.14
HMGB1P41-201ENST00000520234 AKAP9Q99996 3911 aa1.69□□□□□ -2.14
HMGB1P41-201ENST00000520234 NBPF19A0A087WUL8 3843 aa1.68□□□□□ -2.14
HMGB1P41-201ENST00000520234 CHKB-CPT1BH3BT56 60 aa1.68□□□□□ -2.14
HMGB1P41-201ENST00000520234 NDUFB1O75438 58 aa1.68□□□□□ -2.14
HMGB1P41-201ENST00000520234 C9orf116Q5BN46 136 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P41-201ENST00000520234 B9D2Q9BPU9 175 aa1.68□□□□□ -2.14
HMGB1P41-201ENST00000520234 LINC01558Q9Y6Z2 57 aa1.68□□□□□ -2.14
HMGB1P41-201ENST00000520234 EPG5Q9HCE0 2579 aa1.68□□□□□ -2.14
HMGB1P41-201ENST00000520234 ITPR3Q14573 2671 aa1.68□□□□□ -2.14
HMGB1P41-201ENST00000520234 SONP18583 2426 aaKnown RBP1.68□□□□□ -2.14
HMGB1P41-201ENST00000520234 FAM208BQ5VWN6 2430 aa1.68□□□□□ -2.14
HMGB1P41-201ENST00000520234 NF1P21359 2839 aa1.67□□□□□ -2.14
HMGB1P41-201ENST00000520234 CRYBG3Q68DQ2 2970 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms