RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 CRYGAP11844 174 aa3.97□□□□□ -1.77
SDCBP-208ENST00000520228 LINC00337Q8N6G1 96 aa3.97□□□□□ -1.77
SDCBP-208ENST00000520228 HIGD2AQ9BW72 106 aa3.97□□□□□ -1.77
SDCBP-208ENST00000520228 HSBP1L1C9JCN9 74 aa3.96□□□□□ -1.78
SDCBP-208ENST00000520228 IGLV6-57P01721 117 aa3.96□□□□□ -1.78
SDCBP-208ENST00000520228 SPRR1AP35321 89 aa3.96□□□□□ -1.78
SDCBP-208ENST00000520228 PCP2Q8IVA1 136 aa3.96□□□□□ -1.78
SDCBP-208ENST00000520228 SPANXCQ9NY87 97 aa3.96□□□□□ -1.78
SDCBP-208ENST00000520228 FAM229BQ4G0N7 80 aa3.95□□□□□ -1.78
SDCBP-208ENST00000520228 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
SDCBP-208ENST00000520228 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
SDCBP-208ENST00000520228 OR13C6PQ8NH95 151 aa3.95□□□□□ -1.78
SDCBP-208ENST00000520228 COPS9Q8WXC6 57 aa3.95□□□□□ -1.78
SDCBP-208ENST00000520228 SPANXDQ9BXN6 97 aa3.95□□□□□ -1.78
SDCBP-208ENST00000520228 CBY1Q9Y3M2 126 aa3.95□□□□□ -1.78
SDCBP-208ENST00000520228 TNXBP22105 4242 aa3.94□□□□□ -1.78
SDCBP-208ENST00000520228 TRAV23DV6A0A075B6W5 121 aa3.94□□□□□ -1.78
SDCBP-208ENST00000520228 LOC105371267A0A1B0GV96 52 aa3.94□□□□□ -1.78
SDCBP-208ENST00000520228 IFITM1P13164 125 aa3.94□□□□□ -1.78
SDCBP-208ENST00000520228 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
SDCBP-208ENST00000520228 SMCR5Q8TEV8 140 aa3.94□□□□□ -1.78
SDCBP-208ENST00000520228 ZNF706Q9Y5V0 76 aaPredicted RBP3.94□□□□□ -1.78
SDCBP-208ENST00000520228 ZNF73O43830 326 aaPredicted RBP3.93□□□□□ -1.78
SDCBP-208ENST00000520228 HINT1P49773 126 aaPredicted RBP3.93□□□□□ -1.78
SDCBP-208ENST00000520228 MUSTN1Q8IVN3 82 aa3.93□□□□□ -1.78
SDCBP-208ENST00000520228 SPRR4Q96PI1 79 aa3.93□□□□□ -1.78
SDCBP-208ENST00000520228 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
SDCBP-208ENST00000520228 HMCN2Q8NDA2 5059 aa3.93□□□□□ -1.78
SDCBP-208ENST00000520228 JOSD1Q15040 202 aaPredicted RBP3.92□□□□□ -1.78
SDCBP-208ENST00000520228 KRTAP13-2Q52LG2 175 aa3.92□□□□□ -1.78
SDCBP-208ENST00000520228 Q6ZRX8 168 aa3.92□□□□□ -1.78
SDCBP-208ENST00000520228 A6NDN8 102 aa3.91□□□□□ -1.78
SDCBP-208ENST00000520228 ERC2-IT1O76042 136 aa3.91□□□□□ -1.78
SDCBP-208ENST00000520228 TSPAN13O95857 204 aa3.91□□□□□ -1.78
SDCBP-208ENST00000520228 CAMK2N1Q7Z7J9 78 aa3.91□□□□□ -1.78
SDCBP-208ENST00000520228 Q9BRP9 147 aa3.91□□□□□ -1.78
SDCBP-208ENST00000520228 TRAV13-2A0A0B4J235 113 aa3.89□□□□□ -1.79
SDCBP-208ENST00000520228 DLEU1O43261 78 aa3.89□□□□□ -1.79
SDCBP-208ENST00000520228 COX8AP10176 69 aa3.89□□□□□ -1.79
SDCBP-208ENST00000520228 COX7BP24311 80 aa3.89□□□□□ -1.79
SDCBP-208ENST00000520228 C6orf99Q4VX62 202 aa3.89□□□□□ -1.79
SDCBP-208ENST00000520228 LINC00483Q53H64 154 aa3.89□□□□□ -1.79
SDCBP-208ENST00000520228 C3orf22Q8N5N4 141 aa3.89□□□□□ -1.79
SDCBP-208ENST00000520228 LINC00304Q8N9R0 145 aa3.89□□□□□ -1.79
SDCBP-208ENST00000520228 SPATA45Q537H7 98 aa3.88□□□□□ -1.79
SDCBP-208ENST00000520228 C14orf144Q96I85 54 aa3.88□□□□□ -1.79
SDCBP-208ENST00000520228 VAMP8Q9BV40 100 aa3.88□□□□□ -1.79
SDCBP-208ENST00000520228 TRBV7-6A0A0J9YX20 115 aa3.87□□□□□ -1.79
SDCBP-208ENST00000520228 ELOF1P60002 83 aaKnown RBP3.87□□□□□ -1.79
SDCBP-208ENST00000520228 SPAG11AQ6PDA7 123 aa3.87□□□□□ -1.79
SDCBP-208ENST00000520228 ST20-AS1Q8NBB2 130 aa3.87□□□□□ -1.79
SDCBP-208ENST00000520228 CTAG1AP78358 180 aa3.86□□□□□ -1.79
SDCBP-208ENST00000520228 SLC25A34Q6PIV7 304 aa3.86□□□□□ -1.79
SDCBP-208ENST00000520228 SMIM11BQ8TCY0 68 aa3.86□□□□□ -1.79
SDCBP-208ENST00000520228 MOBPQ13875 183 aa3.85□□□□□ -1.79
SDCBP-208ENST00000520228 VAMP3Q15836 100 aa3.85□□□□□ -1.79
SDCBP-208ENST00000520228 SSBP3-AS1Q7Z2R9 100 aa3.85□□□□□ -1.79
SDCBP-208ENST00000520228 HIGD1BQ9P298 99 aa3.85□□□□□ -1.79
SDCBP-208ENST00000520228 PCP4L1A6NKN8 68 aa3.84□□□□□ -1.79
SDCBP-208ENST00000520228 SPRR1BP22528 89 aa3.84□□□□□ -1.79
SDCBP-208ENST00000520228 SEC61GP60059 68 aa3.84□□□□□ -1.79
SDCBP-208ENST00000520228 TAL2Q16559 108 aa3.84□□□□□ -1.79
SDCBP-208ENST00000520228 PYY3Q5JQD4 70 aa3.84□□□□□ -1.79
SDCBP-208ENST00000520228 C9orf153Q5TBE3 101 aa3.84□□□□□ -1.79
SDCBP-208ENST00000520228 DEFB105AQ8NG35 78 aa3.84□□□□□ -1.79
SDCBP-208ENST00000520228 C12orf57Q99622 126 aa3.84□□□□□ -1.79
SDCBP-208ENST00000520228 TEX49A0A1B0GTD5 131 aa3.83□□□□□ -1.8
SDCBP-208ENST00000520228 SLC25A20O43772 301 aa3.83□□□□□ -1.8
SDCBP-208ENST00000520228 SPINK1P00995 79 aa3.83□□□□□ -1.8
SDCBP-208ENST00000520228 C2orf91Q6ZV80 131 aa3.83□□□□□ -1.8
SDCBP-208ENST00000520228 RETNLBQ9BQ08 111 aa3.83□□□□□ -1.8
SDCBP-208ENST00000520228 NHP2Q9NX24 153 aaKnown RBP3.83□□□□□ -1.8
SDCBP-208ENST00000520228 LAMTOR3Q9UHA4 124 aa3.83□□□□□ -1.8
SDCBP-208ENST00000520228 RAB37Q96AX2 223 aa3.82□□□□□ -1.8
SDCBP-208ENST00000520228 LRP2P98164 4655 aa3.82□□□□□ -1.8
SDCBP-208ENST00000520228 H7C2G1 150 aa3.81□□□□□ -1.8
SDCBP-208ENST00000520228 LINC00575Q6W349 94 aa3.81□□□□□ -1.8
SDCBP-208ENST00000520228 IGLV5-48A0A075B6I7 105 aa3.8□□□□□ -1.8
SDCBP-208ENST00000520228 A0A0B4J2C4 111 aa3.8□□□□□ -1.8
SDCBP-208ENST00000520228 hADV29S1A0JD25 119 aa3.8□□□□□ -1.8
SDCBP-208ENST00000520228 BVES-AS1Q5T3Y7 98 aa3.8□□□□□ -1.8
SDCBP-208ENST00000520228 SMIM6P0DI80 62 aa3.79□□□□□ -1.8
SDCBP-208ENST00000520228 RPS29P62273 56 aaKnown RBP3.79□□□□□ -1.8
SDCBP-208ENST00000520228 PRO1933Q9H354 126 aa3.79□□□□□ -1.8
SDCBP-208ENST00000520228 UQCR10Q9UDW1 63 aa3.79□□□□□ -1.8
SDCBP-208ENST00000520228 RNF213Q63HN8 5207 aa3.79□□□□□ -1.8
SDCBP-208ENST00000520228 SNCGO76070 127 aa3.78□□□□□ -1.8
SDCBP-208ENST00000520228 FXYD2P54710 66 aa3.78□□□□□ -1.8
SDCBP-208ENST00000520228 HSD52Q0P140 79 aa3.78□□□□□ -1.8
SDCBP-208ENST00000520228 DEFB116Q30KQ4 102 aa3.78□□□□□ -1.8
SDCBP-208ENST00000520228 HRCT1Q6UXD1 115 aa3.78□□□□□ -1.8
SDCBP-208ENST00000520228 Q6ZQY7 126 aa3.78□□□□□ -1.8
SDCBP-208ENST00000520228 FP248Q71RG6 208 aaPredicted RBP3.78□□□□□ -1.8
SDCBP-208ENST00000520228 PRO1854Q9UHT4 67 aa3.78□□□□□ -1.8
SDCBP-208ENST00000520228 H0YGX0 51 aa3.77□□□□□ -1.81
SDCBP-208ENST00000520228 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.77□□□□□ -1.81
SDCBP-208ENST00000520228 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
SDCBP-208ENST00000520228 LPAP08519 4548 aa3.76□□□□□ -1.81
SDCBP-208ENST00000520228 F8WEM9 126 aa3.76□□□□□ -1.81
SDCBP-208ENST00000520228 CD164Q04900 197 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms