RNA–Protein interactions for RNA: ENST00000518872.1

SYNPO-203, Transcript of synaptopodin, humanhuman

TSL 5

Gene SYNPO, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-203ENST00000518872 IGLV8-61A0A075B6I0 122 aa16.2■□□□□ 0.18
SYNPO-203ENST00000518872 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.2■□□□□ 0.18
SYNPO-203ENST00000518872 PPDPFLQ8WWR9 84 aa16.18■□□□□ 0.18
SYNPO-203ENST00000518872 Q6JHZ5 121 aa16.17■□□□□ 0.18
SYNPO-203ENST00000518872 C14orf144Q96I85 54 aa16.17■□□□□ 0.18
SYNPO-203ENST00000518872 C9orf92A6NGG3 77 aa16.15■□□□□ 0.18
SYNPO-203ENST00000518872 TCL1BO95988 128 aa16.15■□□□□ 0.18
SYNPO-203ENST00000518872 SPATA45Q537H7 98 aa16.15■□□□□ 0.18
SYNPO-203ENST00000518872 PAM16Q9Y3D7 125 aa16.15■□□□□ 0.18
SYNPO-203ENST00000518872 CFC1BP0CG36 223 aa16.14■□□□□ 0.17
SYNPO-203ENST00000518872 CFC1P0CG37 223 aa16.14■□□□□ 0.17
SYNPO-203ENST00000518872 CLEC2BQ92478 149 aa16.12■□□□□ 0.17
SYNPO-203ENST00000518872 VAMP8Q9BV40 100 aa16.12■□□□□ 0.17
SYNPO-203ENST00000518872 A0A0B4J2C4 111 aa16.11■□□□□ 0.17
SYNPO-203ENST00000518872 OCIAD2Q56VL3 154 aa16.1■□□□□ 0.17
SYNPO-203ENST00000518872 C2orf91Q6ZV80 131 aa16.1■□□□□ 0.17
SYNPO-203ENST00000518872 IGFL1Q6UW32 110 aa16.08■□□□□ 0.16
SYNPO-203ENST00000518872 RAB37Q96AX2 223 aa16.08■□□□□ 0.16
SYNPO-203ENST00000518872 TRBV7-7A0A0K0K1E9 115 aa16.05■□□□□ 0.16
SYNPO-203ENST00000518872 PCOTHQ58A44 107 aa16.05■□□□□ 0.16
SYNPO-203ENST00000518872 H0YGX0 51 aa16.04■□□□□ 0.16
SYNPO-203ENST00000518872 SNHG12Q9BXW3 62 aa16.02■□□□□ 0.16
SYNPO-203ENST00000518872 CEND1Q8N111 149 aa16.01■□□□□ 0.15
SYNPO-203ENST00000518872 SNCGO76070 127 aa16■□□□□ 0.15
SYNPO-203ENST00000518872 KRTAP9-2Q9BYQ4 174 aa15.99■□□□□ 0.15
SYNPO-203ENST00000518872 TMEM238LA0A1B0GVL6 79 aa15.96■□□□□ 0.15
SYNPO-203ENST00000518872 A6NJY4 79 aa15.96■□□□□ 0.15
SYNPO-203ENST00000518872 FAM218AQ96MZ4 157 aa15.95■□□□□ 0.14
SYNPO-203ENST00000518872 RPL37P61927 97 aaKnown RBP15.94■□□□□ 0.14
SYNPO-203ENST00000518872 PRO1854Q9UHT4 67 aa15.94■□□□□ 0.14
SYNPO-203ENST00000518872 A0A1B0GX51 115 aa15.93■□□□□ 0.14
SYNPO-203ENST00000518872 H3BUT2 72 aa15.91■□□□□ 0.14
SYNPO-203ENST00000518872 FXYD2P54710 66 aa15.9■□□□□ 0.14
SYNPO-203ENST00000518872 KRTAP19-2Q3LHN2 52 aa15.9■□□□□ 0.14
SYNPO-203ENST00000518872 LCE2CQ5TA81 110 aa15.9■□□□□ 0.14
SYNPO-203ENST00000518872 Q6Q795 121 aa15.9■□□□□ 0.14
SYNPO-203ENST00000518872 PYY3Q5JQD4 70 aa15.89■□□□□ 0.13
SYNPO-203ENST00000518872 GHRHP01286 108 aa15.87■□□□□ 0.13
SYNPO-203ENST00000518872 NDUFV3P56181 108 aaKnown RBP15.86■□□□□ 0.13
SYNPO-203ENST00000518872 SS18L2Q9UHA2 77 aa15.82■□□□□ 0.12
SYNPO-203ENST00000518872 LST1O00453 97 aa15.81■□□□□ 0.12
SYNPO-203ENST00000518872 HSD52Q0P140 79 aa15.81■□□□□ 0.12
SYNPO-203ENST00000518872 TEN1Q86WV5 123 aa15.81■□□□□ 0.12
SYNPO-203ENST00000518872 TRIAP1O43715 76 aa15.8■□□□□ 0.12
SYNPO-203ENST00000518872 H3BMG7 143 aa15.74■□□□□ 0.11
SYNPO-203ENST00000518872 FABP2P12104 132 aa15.71■□□□□ 0.11
SYNPO-203ENST00000518872 Q75L30 129 aa15.7■□□□□ 0.1
SYNPO-203ENST00000518872 OBSCN-AS1Q96MR7 158 aa15.7■□□□□ 0.1
SYNPO-203ENST00000518872 H3BQ85 93 aa15.69■□□□□ 0.1
SYNPO-203ENST00000518872 MT1HP80294 61 aa15.69■□□□□ 0.1
SYNPO-203ENST00000518872 UQCR10Q9UDW1 63 aa15.68■□□□□ 0.1
SYNPO-203ENST00000518872 A0A087WSZ3 146 aa15.67■□□□□ 0.1
SYNPO-203ENST00000518872 DNAL4O96015 105 aa15.66■□□□□ 0.1
SYNPO-203ENST00000518872 K7ERJ3 54 aa15.65■□□□□ 0.1
SYNPO-203ENST00000518872 ORMDL1Q9P0S3 153 aa15.65■□□□□ 0.1
SYNPO-203ENST00000518872 COX6CP09669 75 aa15.64■□□□□ 0.09
SYNPO-203ENST00000518872 PSMB2P49721 201 aa15.63■□□□□ 0.09
SYNPO-203ENST00000518872 A0A1W2PNM2 257 aa15.62■□□□□ 0.09
SYNPO-203ENST00000518872 Q96NJ1 140 aa15.62■□□□□ 0.09
SYNPO-203ENST00000518872 TMA7Q9Y2S6 64 aaKnown RBP15.61■□□□□ 0.09
SYNPO-203ENST00000518872 ATP11AUNQ6ZP68 121 aa15.59■□□□□ 0.09
SYNPO-203ENST00000518872 TMEM256-PLSCR3K7ERE1 68 aa15.58■□□□□ 0.08
SYNPO-203ENST00000518872 LCE2DQ5TA82 110 aaPredicted RBP15.57■□□□□ 0.08
SYNPO-203ENST00000518872 TRBV7-4A0A0J9YYF1 115 aa15.56■□□□□ 0.08
SYNPO-203ENST00000518872 KRTAP9-6A0A140TA67 174 aa15.56■□□□□ 0.08
SYNPO-203ENST00000518872 ANKRD29Q8N6D5 301 aa15.55■□□□□ 0.08
SYNPO-203ENST00000518872 C20orf166-AS1Q96NR2 134 aa15.55■□□□□ 0.08
SYNPO-203ENST00000518872 A8MUU9 505 aa15.5■□□□□ 0.07
SYNPO-203ENST00000518872 TRACP01848 142 aa15.5■□□□□ 0.07
SYNPO-203ENST00000518872 UBE2V1Q13404 147 aa15.5■□□□□ 0.07
SYNPO-203ENST00000518872 COX6B2Q6YFQ2 88 aa15.49■□□□□ 0.07
SYNPO-203ENST00000518872 SIGMAR1Q99720 223 aa15.42■□□□□ 0.06
SYNPO-203ENST00000518872 FLGP20930 4061 aaPredicted RBP15.42■□□□□ 0.06
SYNPO-203ENST00000518872 A0A1B0GV72 72 aa15.41■□□□□ 0.06
SYNPO-203ENST00000518872 CCKP06307 115 aa15.41■□□□□ 0.06
SYNPO-203ENST00000518872 LORP23490 312 aaPredicted RBP15.41■□□□□ 0.06
SYNPO-203ENST00000518872 SCGB1C2P0DMR2 95 aa15.39■□□□□ 0.05
SYNPO-203ENST00000518872 KRTAP10-6P60371 365 aaPredicted RBP15.39■□□□□ 0.05
SYNPO-203ENST00000518872 DSCR10P59022 87 aa15.38■□□□□ 0.05
SYNPO-203ENST00000518872 IGKV4-1P06312 121 aa15.37■□□□□ 0.05
SYNPO-203ENST00000518872 LINC00472Q9H8W2 130 aa15.37■□□□□ 0.05
SYNPO-203ENST00000518872 LINC00313P59037 77 aa15.34■□□□□ 0.05
SYNPO-203ENST00000518872 M0R2T5 61 aa15.33■□□□□ 0.04
SYNPO-203ENST00000518872 RBM3P98179 157 aaKnown RBP15.32■□□□□ 0.04
SYNPO-203ENST00000518872 KRTAP16-1A8MUX0 517 aa15.31■□□□□ 0.04
SYNPO-203ENST00000518872 DSCR8Q96T75 97 aa15.28■□□□□ 0.04
SYNPO-203ENST00000518872 M0R143 59 aa15.27■□□□□ 0.04
SYNPO-203ENST00000518872 BAALC-AS2P0C853 105 aa15.26■□□□□ 0.03
SYNPO-203ENST00000518872 C21orf62-AS1Q17RA5 79 aa15.24■□□□□ 0.03
SYNPO-203ENST00000518872 DEFB116Q30KQ4 102 aa15.24■□□□□ 0.03
SYNPO-203ENST00000518872 NOTCH2NLQ7Z3S9 236 aa15.22■□□□□ 0.03
SYNPO-203ENST00000518872 VPS25Q9BRG1 176 aa15.21■□□□□ 0.03
SYNPO-203ENST00000518872 SMIM6P0DI80 62 aa15.2■□□□□ 0.02
SYNPO-203ENST00000518872 C9JAW5 83 aa15.19■□□□□ 0.02
SYNPO-203ENST00000518872 TRBV20-1A0A075B6N2 111 aa15.17■□□□□ 0.02
SYNPO-203ENST00000518872 ATXN8Q156A1 80 aa15.17■□□□□ 0.02
SYNPO-203ENST00000518872 IGHV6-1A0A0B4J1U7 121 aa15.16■□□□□ 0.02
SYNPO-203ENST00000518872 C8orf87E5RJ46 101 aa15.15■□□□□ 0.02
SYNPO-203ENST00000518872 A0A1B0GVX0 72 aa15.13■□□□□ 0.01
SYNPO-203ENST00000518872 JMJD7-PLA2G4BH0Y9G9 81 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms