RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 SCGB3A1Q96QR1 104 aa3.65□□□□□ -1.83
PABPC1-207ENST00000518716 GFRA4Q9GZZ7 299 aa3.65□□□□□ -1.83
PABPC1-207ENST00000518716 CYP4F30PQ9H0H9 118 aa3.65□□□□□ -1.83
PABPC1-207ENST00000518716 A0A0B4J2C4 111 aa3.64□□□□□ -1.83
PABPC1-207ENST00000518716 REG3AQ06141 175 aa3.64□□□□□ -1.83
PABPC1-207ENST00000518716 FAM74A4Q5TZK3 123 aa3.64□□□□□ -1.83
PABPC1-207ENST00000518716 ATP5EP2Q5VTU8 51 aa3.64□□□□□ -1.83
PABPC1-207ENST00000518716 CLPSL2Q6UWE3 100 aa3.64□□□□□ -1.83
PABPC1-207ENST00000518716 Q6ZRP5 223 aa3.64□□□□□ -1.83
PABPC1-207ENST00000518716 A0A096LNI7 61 aa3.63□□□□□ -1.83
PABPC1-207ENST00000518716 TRBV6-1A0A0K0K1D8 114 aa3.63□□□□□ -1.83
PABPC1-207ENST00000518716 A0A1B0GUV1 79 aa3.63□□□□□ -1.83
PABPC1-207ENST00000518716 ARL14EPLP0DKL9 152 aa3.63□□□□□ -1.83
PABPC1-207ENST00000518716 ADAMTSL4-AS1Q5T5F5 129 aa3.63□□□□□ -1.83
PABPC1-207ENST00000518716 FAM104AQ969W3 186 aa3.63□□□□□ -1.83
PABPC1-207ENST00000518716 NHP2Q9NX24 153 aaKnown RBP3.63□□□□□ -1.83
PABPC1-207ENST00000518716 PSORS1C2Q9UIG4 136 aa3.63□□□□□ -1.83
PABPC1-207ENST00000518716 IGLV4-60A0A075B6I1 120 aa3.62□□□□□ -1.83
PABPC1-207ENST00000518716 GVQW2A0A096LPI5 108 aaPredicted RBP3.62□□□□□ -1.83
PABPC1-207ENST00000518716 IGKV2-24A0A0C4DH68 120 aa3.62□□□□□ -1.83
PABPC1-207ENST00000518716 TRBV10-2A0A0K0K1G8 114 aa3.62□□□□□ -1.83
PABPC1-207ENST00000518716 A6NN06 94 aa3.62□□□□□ -1.83
PABPC1-207ENST00000518716 H7BZZ5 65 aa3.62□□□□□ -1.83
PABPC1-207ENST00000518716 SERF2P84101 59 aa3.62□□□□□ -1.83
PABPC1-207ENST00000518716 ATXN8Q156A1 80 aa3.62□□□□□ -1.83
PABPC1-207ENST00000518716 S100A7L2Q5SY68 101 aa3.62□□□□□ -1.83
PABPC1-207ENST00000518716 DAND5Q8N907 189 aa3.62□□□□□ -1.83
PABPC1-207ENST00000518716 CLEC2BQ92478 149 aa3.62□□□□□ -1.83
PABPC1-207ENST00000518716 PHLDA3Q9Y5J5 127 aa3.62□□□□□ -1.83
PABPC1-207ENST00000518716 TRBV25-1A0A075B6N4 114 aa3.61□□□□□ -1.83
PABPC1-207ENST00000518716 LEPROTO15243 131 aa3.61□□□□□ -1.83
PABPC1-207ENST00000518716 SH2D1AO60880 128 aa3.61□□□□□ -1.83
PABPC1-207ENST00000518716 XCL1P47992 114 aa3.61□□□□□ -1.83
PABPC1-207ENST00000518716 TMEM141Q96I45 108 aa3.61□□□□□ -1.83
PABPC1-207ENST00000518716 LINC00474Q9P2X8 69 aa3.61□□□□□ -1.83
PABPC1-207ENST00000518716 CRCT1Q9UGL9 99 aa3.61□□□□□ -1.83
PABPC1-207ENST00000518716 TRBV10-3A0A0K0K1G6 114 aa3.6□□□□□ -1.83
PABPC1-207ENST00000518716 C19orf71A6NCJ1 209 aa3.6□□□□□ -1.83
PABPC1-207ENST00000518716 ERC2-IT1O76042 136 aa3.6□□□□□ -1.83
PABPC1-207ENST00000518716 KRTAP1-4P0C5Y4 121 aa3.6□□□□□ -1.83
PABPC1-207ENST00000518716 IFI27P40305 119 aaPredicted RBP3.6□□□□□ -1.83
PABPC1-207ENST00000518716 FXYD2P54710 66 aa3.6□□□□□ -1.83
PABPC1-207ENST00000518716 Q6JHZ5 121 aa3.6□□□□□ -1.83
PABPC1-207ENST00000518716 Q86TA4 180 aa3.6□□□□□ -1.83
PABPC1-207ENST00000518716 TRAV7A0A075B6U4 112 aa3.59□□□□□ -1.83
PABPC1-207ENST00000518716 A0A1W2PNN7 141 aa3.59□□□□□ -1.83
PABPC1-207ENST00000518716 M0QY20 66 aa3.59□□□□□ -1.83
PABPC1-207ENST00000518716 HIGD2BQ4VC39 106 aa3.59□□□□□ -1.83
PABPC1-207ENST00000518716 SOSTDC1Q6X4U4 206 aa3.59□□□□□ -1.83
PABPC1-207ENST00000518716 TMEM167BQ9NRX6 74 aa3.59□□□□□ -1.83
PABPC1-207ENST00000518716 KRTAP16-1A8MUX0 517 aa3.58□□□□□ -1.84
PABPC1-207ENST00000518716 PRR4Q16378 134 aa3.58□□□□□ -1.84
PABPC1-207ENST00000518716 ORMDL3Q8N138 153 aa3.58□□□□□ -1.84
PABPC1-207ENST00000518716 CAMK2N2Q96S95 79 aa3.58□□□□□ -1.84
PABPC1-207ENST00000518716 PRO1854Q9UHT4 67 aa3.58□□□□□ -1.84
PABPC1-207ENST00000518716 IGLV1-50A0A075B6I6 118 aa3.57□□□□□ -1.84
PABPC1-207ENST00000518716 TMSB15BA0A087X1C1 80 aa3.57□□□□□ -1.84
PABPC1-207ENST00000518716 COX6CP09669 75 aa3.57□□□□□ -1.84
PABPC1-207ENST00000518716 LOC107984156A0A0G2JMH3 177 aa3.56□□□□□ -1.84
PABPC1-207ENST00000518716 TSHBP01222 138 aa3.56□□□□□ -1.84
PABPC1-207ENST00000518716 IGLV7-43P04211 117 aa3.56□□□□□ -1.84
PABPC1-207ENST00000518716 UBE2D1P51668 147 aa3.56□□□□□ -1.84
PABPC1-207ENST00000518716 KRTAP11-1Q8IUC1 163 aa3.56□□□□□ -1.84
PABPC1-207ENST00000518716 ARL17AQ8IVW1 177 aa3.56□□□□□ -1.84
PABPC1-207ENST00000518716 LIMD2Q9BT23 127 aa3.56□□□□□ -1.84
PABPC1-207ENST00000518716 OCR1Q9BZK8 76 aa3.56□□□□□ -1.84
PABPC1-207ENST00000518716 K7ERS5 55 aa3.55□□□□□ -1.84
PABPC1-207ENST00000518716 TSPEAR-AS2P59090 65 aa3.55□□□□□ -1.84
PABPC1-207ENST00000518716 FAM19A2Q8N3H0 131 aa3.55□□□□□ -1.84
PABPC1-207ENST00000518716 NDUFA12Q9UI09 145 aa3.55□□□□□ -1.84
PABPC1-207ENST00000518716 SYCNQ0VAF6 134 aa3.54□□□□□ -1.84
PABPC1-207ENST00000518716 C9orf116Q5BN46 136 aaPredicted RBP3.54□□□□□ -1.84
PABPC1-207ENST00000518716 C1orf137Q5JT78 98 aa3.54□□□□□ -1.84
PABPC1-207ENST00000518716 CYSTM1Q9H1C7 97 aa3.54□□□□□ -1.84
PABPC1-207ENST00000518716 SND1-IT1Q9HBX3 110 aa3.54□□□□□ -1.84
PABPC1-207ENST00000518716 hDV103S1A0JD37 113 aa3.53□□□□□ -1.84
PABPC1-207ENST00000518716 C2orf82Q6UX34 121 aa3.53□□□□□ -1.84
PABPC1-207ENST00000518716 C2orf66Q6UXQ4 117 aa3.53□□□□□ -1.84
PABPC1-207ENST00000518716 CAMK2N1Q7Z7J9 78 aa3.53□□□□□ -1.84
PABPC1-207ENST00000518716 C20orf197Q8N268 126 aa3.53□□□□□ -1.84
PABPC1-207ENST00000518716 RETNLBQ9BQ08 111 aa3.53□□□□□ -1.84
PABPC1-207ENST00000518716 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.84
PABPC1-207ENST00000518716 IGKV3OR2-268A0A0C4DH90 116 aa3.52□□□□□ -1.85
PABPC1-207ENST00000518716 TRBV30A0A0K0K1B3 111 aa3.52□□□□□ -1.85
PABPC1-207ENST00000518716 CTXND1A0A1B0GTU2 59 aa3.52□□□□□ -1.85
PABPC1-207ENST00000518716 H7C423 109 aa3.52□□□□□ -1.85
PABPC1-207ENST00000518716 KRTAP7-1Q8IUC3 87 aa3.52□□□□□ -1.85
PABPC1-207ENST00000518716 RPP21Q9H633 154 aaKnown RBP3.52□□□□□ -1.85
PABPC1-207ENST00000518716 TEX49A0A1B0GTD5 131 aa3.51□□□□□ -1.85
PABPC1-207ENST00000518716 LINC00959A0A1B0GUT2 108 aa3.51□□□□□ -1.85
PABPC1-207ENST00000518716 SMIM27A0A1W2PRY6 76 aa3.51□□□□□ -1.85
PABPC1-207ENST00000518716 TMEM223A0PJW6 202 aa3.51□□□□□ -1.85
PABPC1-207ENST00000518716 ZNF815PA8K554 130 aa3.51□□□□□ -1.85
PABPC1-207ENST00000518716 UBE2D4Q9Y2X8 147 aa3.51□□□□□ -1.85
PABPC1-207ENST00000518716 IGLV4-69A0A075B6H9 119 aa3.5□□□□□ -1.85
PABPC1-207ENST00000518716 LINC01549A6NIU2 74 aa3.5□□□□□ -1.85
PABPC1-207ENST00000518716 HCG22E2RYF7 251 aa3.5□□□□□ -1.85
PABPC1-207ENST00000518716 CASC2Q6XLA1 102 aa3.5□□□□□ -1.85
PABPC1-207ENST00000518716 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.49□□□□□ -1.85
PABPC1-207ENST00000518716 FAM168BA1KXE4 195 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms