RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 IFITM2Q01629 132 aa3.16□□□□□ -1.9
CCDC6-203ENST00000518638 DEFB116Q30KQ4 102 aa3.16□□□□□ -1.9
CCDC6-203ENST00000518638 SLC25A34Q6PIV7 304 aa3.16□□□□□ -1.9
CCDC6-203ENST00000518638 ALKAL2Q6UX46 152 aa3.16□□□□□ -1.9
CCDC6-203ENST00000518638 Q8N8P6 123 aa3.16□□□□□ -1.9
CCDC6-203ENST00000518638 KCNQ1DNQ9H478 68 aa3.16□□□□□ -1.9
CCDC6-203ENST00000518638 SPINK8P0C7L1 97 aa3.15□□□□□ -1.91
CCDC6-203ENST00000518638 ATP5L2Q7Z4Y8 100 aa3.15□□□□□ -1.91
CCDC6-203ENST00000518638 NXT2Q9NPJ8 142 aaKnown RBP3.15□□□□□ -1.91
CCDC6-203ENST00000518638 C20orf202A1L168 122 aa3.14□□□□□ -1.91
CCDC6-203ENST00000518638 LINC00587B1AMM8 73 aa3.14□□□□□ -1.91
CCDC6-203ENST00000518638 S100PP25815 95 aa3.14□□□□□ -1.91
CCDC6-203ENST00000518638 JOSD1Q15040 202 aaPredicted RBP3.14□□□□□ -1.91
CCDC6-203ENST00000518638 MRPL54Q6P161 138 aaKnown RBP3.14□□□□□ -1.91
CCDC6-203ENST00000518638 TOMM6Q96B49 74 aa3.14□□□□□ -1.91
CCDC6-203ENST00000518638 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
CCDC6-203ENST00000518638 Q6ZRX8 168 aa3.13□□□□□ -1.91
CCDC6-203ENST00000518638 LINC00313P59037 77 aa3.12□□□□□ -1.91
CCDC6-203ENST00000518638 ADIRFQ15847 76 aa3.12□□□□□ -1.91
CCDC6-203ENST00000518638 SPANXA2-OT1Q8N9U9 137 aa3.12□□□□□ -1.91
CCDC6-203ENST00000518638 Q8NDZ9 215 aa3.12□□□□□ -1.91
CCDC6-203ENST00000518638 SCGB3A1Q96QR1 104 aa3.12□□□□□ -1.91
CCDC6-203ENST00000518638 TRBV20-1A0A075B6N2 111 aa3.11□□□□□ -1.91
CCDC6-203ENST00000518638 SCGB1A1P11684 91 aa3.11□□□□□ -1.91
CCDC6-203ENST00000518638 LINC00158P58513 81 aa3.11□□□□□ -1.91
CCDC6-203ENST00000518638 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
CCDC6-203ENST00000518638 Q5XG85 94 aa3.11□□□□□ -1.91
CCDC6-203ENST00000518638 ATP11AUNQ6ZP68 121 aa3.11□□□□□ -1.91
CCDC6-203ENST00000518638 C12orf57Q99622 126 aa3.11□□□□□ -1.91
CCDC6-203ENST00000518638 NAT8Q9UHE5 227 aa3.11□□□□□ -1.91
CCDC6-203ENST00000518638 TRBV10-3A0A0K0K1G6 114 aa3.1□□□□□ -1.91
CCDC6-203ENST00000518638 TSTD3H0UI37 97 aa3.1□□□□□ -1.91
CCDC6-203ENST00000518638 MT2AP02795 61 aa3.1□□□□□ -1.91
CCDC6-203ENST00000518638 PMAIP1Q13794 54 aa3.1□□□□□ -1.91
CCDC6-203ENST00000518638 BATFQ16520 125 aa3.1□□□□□ -1.91
CCDC6-203ENST00000518638 C10orf91Q5T1B1 145 aa3.1□□□□□ -1.91
CCDC6-203ENST00000518638 CST9LQ9H4G1 147 aa3.1□□□□□ -1.91
CCDC6-203ENST00000518638 NCR3O14931 201 aa3.09□□□□□ -1.91
CCDC6-203ENST00000518638 ERC2-IT1O76042 136 aa3.09□□□□□ -1.91
CCDC6-203ENST00000518638 KRTAP10-10P60014 251 aa3.09□□□□□ -1.91
CCDC6-203ENST00000518638 HRCT1Q6UXD1 115 aa3.09□□□□□ -1.91
CCDC6-203ENST00000518638 ZNF625Q96I27 306 aaPredicted RBP3.09□□□□□ -1.91
CCDC6-203ENST00000518638 Q9BRP9 147 aa3.09□□□□□ -1.91
CCDC6-203ENST00000518638 LAMTOR3Q9UHA4 124 aa3.09□□□□□ -1.91
CCDC6-203ENST00000518638 TRBV10-2A0A0K0K1G8 114 aa3.08□□□□□ -1.92
CCDC6-203ENST00000518638 A0A1B0GV90 55 aa3.08□□□□□ -1.92
CCDC6-203ENST00000518638 H7C2G1 150 aa3.08□□□□□ -1.92
CCDC6-203ENST00000518638 SRP19P09132 144 aaKnown RBP3.08□□□□□ -1.92
CCDC6-203ENST00000518638 IGLC3P0DOY3 106 aa3.08□□□□□ -1.92
CCDC6-203ENST00000518638 HINT1P49773 126 aaPredicted RBP3.08□□□□□ -1.92
CCDC6-203ENST00000518638 MIR7-3HGQ8N6C7 128 aa3.08□□□□□ -1.92
CCDC6-203ENST00000518638 SIGMAR1Q99720 223 aa3.08□□□□□ -1.92
CCDC6-203ENST00000518638 MT1FP04733 61 aa3.07□□□□□ -1.92
CCDC6-203ENST00000518638 ZNF22P17026 224 aaPredicted RBP3.07□□□□□ -1.92
CCDC6-203ENST00000518638 SPRR1BP22528 89 aa3.07□□□□□ -1.92
CCDC6-203ENST00000518638 MEIG1Q5JSS6 88 aa3.07□□□□□ -1.92
CCDC6-203ENST00000518638 SMIM20Q8N5G0 67 aa3.07□□□□□ -1.92
CCDC6-203ENST00000518638 PRO1933Q9H354 126 aa3.07□□□□□ -1.92
CCDC6-203ENST00000518638 PRO0461Q9UI25 63 aa3.07□□□□□ -1.92
CCDC6-203ENST00000518638 SMIM6P0DI80 62 aa3.06□□□□□ -1.92
CCDC6-203ENST00000518638 S100A2P29034 98 aa3.06□□□□□ -1.92
CCDC6-203ENST00000518638 NEBP20929 6669 aa3.05□□□□□ -1.92
CCDC6-203ENST00000518638 TCL1BO95988 128 aa3.05□□□□□ -1.92
CCDC6-203ENST00000518638 ADCYAP1P18509 176 aa3.05□□□□□ -1.92
CCDC6-203ENST00000518638 S100A7L2Q5SY68 101 aa3.05□□□□□ -1.92
CCDC6-203ENST00000518638 TMEM170BQ5T4T1 132 aa3.05□□□□□ -1.92
CCDC6-203ENST00000518638 TRAV23DV6A0A075B6W5 121 aa3.04□□□□□ -1.92
CCDC6-203ENST00000518638 FAM236DA0A1B0GTK5 79 aa3.04□□□□□ -1.92
CCDC6-203ENST00000518638 FAM236CP0DP71 79 aa3.04□□□□□ -1.92
CCDC6-203ENST00000518638 LGALS3P17931 250 aaKnown RBP3.04□□□□□ -1.92
CCDC6-203ENST00000518638 AKR1D1P51857 326 aa3.04□□□□□ -1.92
CCDC6-203ENST00000518638 ADM2Q7Z4H4 148 aa3.04□□□□□ -1.92
CCDC6-203ENST00000518638 MIEN1Q9BRT3 115 aa3.04□□□□□ -1.92
CCDC6-203ENST00000518638 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
CCDC6-203ENST00000518638 LOC107984156A0A0G2JMH3 177 aa3.03□□□□□ -1.92
CCDC6-203ENST00000518638 LINC01546A6NGU7 62 aa3.03□□□□□ -1.92
CCDC6-203ENST00000518638 A8MWP4 228 aa3.03□□□□□ -1.92
CCDC6-203ENST00000518638 K7ERS5 55 aa3.03□□□□□ -1.92
CCDC6-203ENST00000518638 DLEU1O43261 78 aa3.03□□□□□ -1.92
CCDC6-203ENST00000518638 ZNF73O43830 326 aaPredicted RBP3.03□□□□□ -1.92
CCDC6-203ENST00000518638 SMIM13P0DJ93 91 aa3.03□□□□□ -1.92
CCDC6-203ENST00000518638 NDUFA6P56556 154 aa3.03□□□□□ -1.92
CCDC6-203ENST00000518638 ARL17AQ8IVW1 177 aa3.03□□□□□ -1.92
CCDC6-203ENST00000518638 ST20-AS1Q8NBB2 130 aa3.03□□□□□ -1.92
CCDC6-203ENST00000518638 OR13C6PQ8NH95 151 aa3.03□□□□□ -1.92
CCDC6-203ENST00000518638 C20orf166-AS1Q96NR2 134 aa3.03□□□□□ -1.92
CCDC6-203ENST00000518638 SMCO4Q9NRQ5 59 aa3.03□□□□□ -1.92
CCDC6-203ENST00000518638 NDUFC2O95298 119 aa3.02□□□□□ -1.93
CCDC6-203ENST00000518638 PEA15Q15121 130 aa3.02□□□□□ -1.93
CCDC6-203ENST00000518638 TCTE3Q8IZS6 198 aa3.02□□□□□ -1.93
CCDC6-203ENST00000518638 MYMXA0A1B0GTQ4 84 aa3.01□□□□□ -1.93
CCDC6-203ENST00000518638 A8MUU9 505 aa3.01□□□□□ -1.93
CCDC6-203ENST00000518638 TEX49A0A1B0GTD5 131 aa3□□□□□ -1.93
CCDC6-203ENST00000518638 C11orf86A6NJI1 115 aa3□□□□□ -1.93
CCDC6-203ENST00000518638 HBDP02042 147 aa3□□□□□ -1.93
CCDC6-203ENST00000518638 C14orf144Q96I85 54 aa3□□□□□ -1.93
CCDC6-203ENST00000518638 OBSCN-AS1Q96MR7 158 aa3□□□□□ -1.93
CCDC6-203ENST00000518638 SS18L2Q9UHA2 77 aa3□□□□□ -1.93
CCDC6-203ENST00000518638 MT-ND4LP03901 98 aa2.99□□□□□ -1.93
CCDC6-203ENST00000518638 LST1O00453 97 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms