RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 VAMP3Q15836 100 aa6.65□□□□□ -1.34
MRPS28-202ENST00000518271 PAM16Q9Y3D7 125 aa6.65□□□□□ -1.34
MRPS28-202ENST00000518271 IGLV8-61A0A075B6I0 122 aa6.64□□□□□ -1.35
MRPS28-202ENST00000518271 CFC1BP0CG36 223 aa6.64□□□□□ -1.35
MRPS28-202ENST00000518271 CFC1P0CG37 223 aa6.64□□□□□ -1.35
MRPS28-202ENST00000518271 SPATA45Q537H7 98 aa6.64□□□□□ -1.35
MRPS28-202ENST00000518271 HIGD1BQ9P298 99 aa6.64□□□□□ -1.35
MRPS28-202ENST00000518271 KRTAP19-2Q3LHN2 52 aa6.61□□□□□ -1.35
MRPS28-202ENST00000518271 IGFL1Q6UW32 110 aa6.61□□□□□ -1.35
MRPS28-202ENST00000518271 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.61□□□□□ -1.35
MRPS28-202ENST00000518271 VAMP8Q9BV40 100 aa6.61□□□□□ -1.35
MRPS28-202ENST00000518271 A0A0B4J2C4 111 aa6.6□□□□□ -1.35
MRPS28-202ENST00000518271 BVES-AS1Q5T3Y7 98 aa6.6□□□□□ -1.35
MRPS28-202ENST00000518271 LCE2CQ5TA81 110 aa6.6□□□□□ -1.35
MRPS28-202ENST00000518271 FAM218AQ96MZ4 157 aa6.6□□□□□ -1.35
MRPS28-202ENST00000518271 F8WEM9 126 aa6.59□□□□□ -1.35
MRPS28-202ENST00000518271 PCOTHQ58A44 107 aa6.59□□□□□ -1.35
MRPS28-202ENST00000518271 CLEC2BQ92478 149 aa6.59□□□□□ -1.35
MRPS28-202ENST00000518271 KRTAP9-2Q9BYQ4 174 aa6.59□□□□□ -1.35
MRPS28-202ENST00000518271 OCIAD2Q56VL3 154 aa6.58□□□□□ -1.36
MRPS28-202ENST00000518271 Q6JHZ5 121 aa6.58□□□□□ -1.36
MRPS28-202ENST00000518271 PPDPFLQ8WWR9 84 aa6.58□□□□□ -1.36
MRPS28-202ENST00000518271 TRBV7-7A0A0K0K1E9 115 aa6.57□□□□□ -1.36
MRPS28-202ENST00000518271 H3BUT2 72 aa6.56□□□□□ -1.36
MRPS28-202ENST00000518271 FXYD2P54710 66 aa6.56□□□□□ -1.36
MRPS28-202ENST00000518271 PYY3Q5JQD4 70 aa6.56□□□□□ -1.36
MRPS28-202ENST00000518271 CEND1Q8N111 149 aa6.56□□□□□ -1.36
MRPS28-202ENST00000518271 RAB37Q96AX2 223 aa6.56□□□□□ -1.36
MRPS28-202ENST00000518271 TCL1BO95988 128 aa6.55□□□□□ -1.36
MRPS28-202ENST00000518271 H0YGX0 51 aa6.53□□□□□ -1.36
MRPS28-202ENST00000518271 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
MRPS28-202ENST00000518271 PRO1854Q9UHT4 67 aa6.52□□□□□ -1.37
MRPS28-202ENST00000518271 FLGP20930 4061 aaPredicted RBP6.52□□□□□ -1.37
MRPS28-202ENST00000518271 TRIAP1O43715 76 aa6.51□□□□□ -1.37
MRPS28-202ENST00000518271 SNHG12Q9BXW3 62 aa6.51□□□□□ -1.37
MRPS28-202ENST00000518271 TMEM238LA0A1B0GVL6 79 aa6.49□□□□□ -1.37
MRPS28-202ENST00000518271 A6NJY4 79 aa6.49□□□□□ -1.37
MRPS28-202ENST00000518271 NDUFV3P56181 108 aaKnown RBP6.49□□□□□ -1.37
MRPS28-202ENST00000518271 Q6Q795 121 aa6.49□□□□□ -1.37
MRPS28-202ENST00000518271 A0A1B0GX51 115 aa6.48□□□□□ -1.37
MRPS28-202ENST00000518271 K7ERJ3 54 aa6.48□□□□□ -1.37
MRPS28-202ENST00000518271 MT1HP80294 61 aa6.48□□□□□ -1.37
MRPS28-202ENST00000518271 HSD52Q0P140 79 aa6.48□□□□□ -1.37
MRPS28-202ENST00000518271 TMA7Q9Y2S6 64 aaKnown RBP6.47□□□□□ -1.37
MRPS28-202ENST00000518271 Q96NJ1 140 aa6.45□□□□□ -1.38
MRPS28-202ENST00000518271 A0A1W2PNM2 257 aa6.44□□□□□ -1.38
MRPS28-202ENST00000518271 LST1O00453 97 aa6.44□□□□□ -1.38
MRPS28-202ENST00000518271 TEN1Q86WV5 123 aa6.44□□□□□ -1.38
MRPS28-202ENST00000518271 OBSCN-AS1Q96MR7 158 aa6.44□□□□□ -1.38
MRPS28-202ENST00000518271 H3BMG7 143 aa6.43□□□□□ -1.38
MRPS28-202ENST00000518271 SNCGO76070 127 aa6.43□□□□□ -1.38
MRPS28-202ENST00000518271 A0A087WSZ3 146 aa6.42□□□□□ -1.38
MRPS28-202ENST00000518271 Q75L30 129 aa6.42□□□□□ -1.38
MRPS28-202ENST00000518271 SS18L2Q9UHA2 77 aa6.42□□□□□ -1.38
MRPS28-202ENST00000518271 FABP2P12104 132 aa6.41□□□□□ -1.38
MRPS28-202ENST00000518271 UQCR10Q9UDW1 63 aa6.41□□□□□ -1.38
MRPS28-202ENST00000518271 ORMDL1Q9P0S3 153 aa6.39□□□□□ -1.39
MRPS28-202ENST00000518271 PSMB2P49721 201 aa6.38□□□□□ -1.39
MRPS28-202ENST00000518271 A0A1B0GV72 72 aa6.37□□□□□ -1.39
MRPS28-202ENST00000518271 GHRHP01286 108 aa6.37□□□□□ -1.39
MRPS28-202ENST00000518271 C20orf166-AS1Q96NR2 134 aa6.37□□□□□ -1.39
MRPS28-202ENST00000518271 A8MUU9 505 aa6.36□□□□□ -1.39
MRPS28-202ENST00000518271 DNAL4O96015 105 aa6.36□□□□□ -1.39
MRPS28-202ENST00000518271 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
MRPS28-202ENST00000518271 TRBV7-4A0A0J9YYF1 115 aa6.35□□□□□ -1.39
MRPS28-202ENST00000518271 KRTAP9-6A0A140TA67 174 aa6.35□□□□□ -1.39
MRPS28-202ENST00000518271 TRACP01848 142 aa6.34□□□□□ -1.39
MRPS28-202ENST00000518271 COX6CP09669 75 aa6.34□□□□□ -1.39
MRPS28-202ENST00000518271 DSCR10P59022 87 aa6.34□□□□□ -1.39
MRPS28-202ENST00000518271 KRTAP10-6P60371 365 aaPredicted RBP6.34□□□□□ -1.39
MRPS28-202ENST00000518271 ANKRD29Q8N6D5 301 aa6.34□□□□□ -1.39
MRPS28-202ENST00000518271 H3BQ85 93 aa6.33□□□□□ -1.4
MRPS28-202ENST00000518271 ATP11AUNQ6ZP68 121 aa6.33□□□□□ -1.4
MRPS28-202ENST00000518271 KRTAP3-3Q9BYR6 98 aa6.33□□□□□ -1.4
MRPS28-202ENST00000518271 KRTAP3-2Q9BYR7 98 aa6.33□□□□□ -1.4
MRPS28-202ENST00000518271 KRTAP16-1A8MUX0 517 aa6.32□□□□□ -1.4
MRPS28-202ENST00000518271 TMEM256-PLSCR3K7ERE1 68 aa6.32□□□□□ -1.4
MRPS28-202ENST00000518271 UBE2V1Q13404 147 aa6.32□□□□□ -1.4
MRPS28-202ENST00000518271 SIGMAR1Q99720 223 aa6.32□□□□□ -1.4
MRPS28-202ENST00000518271 LINC00472Q9H8W2 130 aa6.31□□□□□ -1.4
MRPS28-202ENST00000518271 CCKP06307 115 aa6.3□□□□□ -1.4
MRPS28-202ENST00000518271 COX6B2Q6YFQ2 88 aa6.3□□□□□ -1.4
MRPS28-202ENST00000518271 NOTCH2NLQ7Z3S9 236 aa6.3□□□□□ -1.4
MRPS28-202ENST00000518271 IGKV4-1P06312 121 aa6.29□□□□□ -1.4
MRPS28-202ENST00000518271 DEFB116Q30KQ4 102 aa6.28□□□□□ -1.4
MRPS28-202ENST00000518271 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
MRPS28-202ENST00000518271 SCGB1C2P0DMR2 95 aa6.26□□□□□ -1.41
MRPS28-202ENST00000518271 NAA38Q9BRA0 125 aaKnown RBP6.26□□□□□ -1.41
MRPS28-202ENST00000518271 LINC00313P59037 77 aa6.25□□□□□ -1.41
MRPS28-202ENST00000518271 SMIM6P0DI80 62 aa6.24□□□□□ -1.41
MRPS28-202ENST00000518271 RBM3P98179 157 aaKnown RBP6.24□□□□□ -1.41
MRPS28-202ENST00000518271 M0R143 59 aa6.23□□□□□ -1.41
MRPS28-202ENST00000518271 M0R2T5 61 aa6.23□□□□□ -1.41
MRPS28-202ENST00000518271 BAALC-AS2P0C853 105 aa6.23□□□□□ -1.41
MRPS28-202ENST00000518271 VPS25Q9BRG1 176 aa6.23□□□□□ -1.41
MRPS28-202ENST00000518271 IGHV6-1A0A0B4J1U7 121 aa6.21□□□□□ -1.42
MRPS28-202ENST00000518271 DSCR8Q96T75 97 aa6.21□□□□□ -1.42
MRPS28-202ENST00000518271 A0A1B0GVX0 72 aa6.2□□□□□ -1.42
MRPS28-202ENST00000518271 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
MRPS28-202ENST00000518271 ATXN8Q156A1 80 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms