RNA–Protein interactions for RNA: ENST00000517391.5

CPNE3-202, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-202ENST00000517391 IFI27L1Q96BM0 104 aa2.73□□□□□ -1.97
CPNE3-202ENST00000517391 SS18L2Q9UHA2 77 aa2.73□□□□□ -1.97
CPNE3-202ENST00000517391 IGLV10-54A0A075B6I4 117 aa2.72□□□□□ -1.97
CPNE3-202ENST00000517391 IGHV3-64A0A075B6Q5 118 aa2.72□□□□□ -1.97
CPNE3-202ENST00000517391 TRBV27A0A0K0K1C4 114 aa2.72□□□□□ -1.97
CPNE3-202ENST00000517391 SLC25A20O43772 301 aa2.72□□□□□ -1.97
CPNE3-202ENST00000517391 FXYD2P54710 66 aa2.72□□□□□ -1.97
CPNE3-202ENST00000517391 CIRBPQ14011 172 aaKnown RBP2.72□□□□□ -1.97
CPNE3-202ENST00000517391 SDIM1Q6ZPB5 146 aa2.72□□□□□ -1.97
CPNE3-202ENST00000517391 GVQW2A0A096LPI5 108 aaPredicted RBP2.71□□□□□ -1.98
CPNE3-202ENST00000517391 TRAV26-2A0A0B4J265 109 aa2.71□□□□□ -1.98
CPNE3-202ENST00000517391 K7EMI3 77 aa2.71□□□□□ -1.98
CPNE3-202ENST00000517391 DPM2O94777 84 aa2.71□□□□□ -1.98
CPNE3-202ENST00000517391 MT-ATP8P03928 68 aa2.71□□□□□ -1.98
CPNE3-202ENST00000517391 P0C880 135 aa2.71□□□□□ -1.98
CPNE3-202ENST00000517391 PLNP26678 52 aa2.71□□□□□ -1.98
CPNE3-202ENST00000517391 FCER1GP30273 86 aa2.71□□□□□ -1.98
CPNE3-202ENST00000517391 POLR2KP53803 58 aaKnown RBP2.71□□□□□ -1.98
CPNE3-202ENST00000517391 RPL37AP61513 92 aaKnown RBP2.71□□□□□ -1.98
CPNE3-202ENST00000517391 RPL39LQ96EH5 51 aaKnown RBP2.71□□□□□ -1.98
CPNE3-202ENST00000517391 PRELID3AQ96N28 172 aa2.71□□□□□ -1.98
CPNE3-202ENST00000517391 NXT2Q9NPJ8 142 aaKnown RBP2.71□□□□□ -1.98
CPNE3-202ENST00000517391 LINC00474Q9P2X8 69 aa2.71□□□□□ -1.98
CPNE3-202ENST00000517391 TP73-AS1Q9UF72 201 aa2.71□□□□□ -1.98
CPNE3-202ENST00000517391 FAT1Q14517 4588 aa2.7□□□□□ -1.98
CPNE3-202ENST00000517391 TRAV12-1A0A0B4J245 112 aa2.7□□□□□ -1.98
CPNE3-202ENST00000517391 IGHV1-58A0A0C4DH39 117 aa2.7□□□□□ -1.98
CPNE3-202ENST00000517391 MYMXA0A1B0GTQ4 84 aa2.7□□□□□ -1.98
CPNE3-202ENST00000517391 LINC01549A6NIU2 74 aa2.7□□□□□ -1.98
CPNE3-202ENST00000517391 SNCGO76070 127 aa2.7□□□□□ -1.98
CPNE3-202ENST00000517391 IGKCP01834 107 aa2.7□□□□□ -1.98
CPNE3-202ENST00000517391 IGKV4-1P06312 121 aa2.7□□□□□ -1.98
CPNE3-202ENST00000517391 UBE2D1P51668 147 aa2.7□□□□□ -1.98
CPNE3-202ENST00000517391 KRTAP10-4P60372 401 aaPredicted RBP2.7□□□□□ -1.98
CPNE3-202ENST00000517391 SS18Q15532 418 aa2.7□□□□□ -1.98
CPNE3-202ENST00000517391 SPACA4Q8TDM5 124 aa2.7□□□□□ -1.98
CPNE3-202ENST00000517391 DPH3Q96FX2 82 aa2.7□□□□□ -1.98
CPNE3-202ENST00000517391 C20orf78Q9BR46 151 aa2.7□□□□□ -1.98
CPNE3-202ENST00000517391 TIMM21Q9BVV7 248 aa2.7□□□□□ -1.98
CPNE3-202ENST00000517391 NHP2Q9NX24 153 aaKnown RBP2.7□□□□□ -1.98
CPNE3-202ENST00000517391 MYCBP2O75592 4640 aa2.69□□□□□ -1.98
CPNE3-202ENST00000517391 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-202ENST00000517391 IGKV3OR2-268A0A0C4DH90 116 aa2.69□□□□□ -1.98
CPNE3-202ENST00000517391 LINC00959A0A1B0GUT2 108 aa2.69□□□□□ -1.98
CPNE3-202ENST00000517391 IGKV2-29A2NJV5 120 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-202ENST00000517391 C9JAW5 83 aa2.69□□□□□ -1.98
CPNE3-202ENST00000517391 NPYP01303 97 aa2.69□□□□□ -1.98
CPNE3-202ENST00000517391 IFI27P40305 119 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-202ENST00000517391 CDC42SE2Q9NRR3 84 aa2.69□□□□□ -1.98
CPNE3-202ENST00000517391 PLAC8Q9NZF1 115 aa2.69□□□□□ -1.98
CPNE3-202ENST00000517391 LAMTOR3Q9UHA4 124 aa2.69□□□□□ -1.98
CPNE3-202ENST00000517391 TRBV7-7A0A0K0K1E9 115 aa2.68□□□□□ -1.98
CPNE3-202ENST00000517391 D6R8Y8 96 aa2.68□□□□□ -1.98
CPNE3-202ENST00000517391 COX7A2LO14548 114 aa2.68□□□□□ -1.98
CPNE3-202ENST00000517391 UQCRQO14949 82 aa2.68□□□□□ -1.98
CPNE3-202ENST00000517391 ACYP1P07311 99 aa2.68□□□□□ -1.98
CPNE3-202ENST00000517391 CKS2P33552 79 aa2.68□□□□□ -1.98
CPNE3-202ENST00000517391 XCL1P47992 114 aa2.68□□□□□ -1.98
CPNE3-202ENST00000517391 COX6A2Q02221 97 aa2.68□□□□□ -1.98
CPNE3-202ENST00000517391 MEIG1Q5JSS6 88 aa2.68□□□□□ -1.98
CPNE3-202ENST00000517391 COPS9Q8WXC6 57 aa2.68□□□□□ -1.98
CPNE3-202ENST00000517391 CARD19Q96LW7 228 aa2.68□□□□□ -1.98
CPNE3-202ENST00000517391 NAA38Q9BRA0 125 aaKnown RBP2.68□□□□□ -1.98
CPNE3-202ENST00000517391 VPS13BQ7Z7G8 4022 aa2.68□□□□□ -1.98
CPNE3-202ENST00000517391 IGKV2D-26A0A0A0MRZ7 120 aa2.67□□□□□ -1.98
CPNE3-202ENST00000517391 K7ERJ3 54 aa2.67□□□□□ -1.98
CPNE3-202ENST00000517391 ZNF22P17026 224 aaPredicted RBP2.67□□□□□ -1.98
CPNE3-202ENST00000517391 MRPS36P82909 103 aaKnown RBP2.67□□□□□ -1.98
CPNE3-202ENST00000517391 MRPL51Q4U2R6 128 aaKnown RBP2.67□□□□□ -1.98
CPNE3-202ENST00000517391 Q8N8P6 123 aa2.67□□□□□ -1.98
CPNE3-202ENST00000517391 PLEKHB2Q96CS7 222 aa2.67□□□□□ -1.98
CPNE3-202ENST00000517391 LINC00526Q96FQ7 95 aa2.67□□□□□ -1.98
CPNE3-202ENST00000517391 SMIM2Q9BVW6 85 aa2.67□□□□□ -1.98
CPNE3-202ENST00000517391 UBE2D4Q9Y2X8 147 aa2.67□□□□□ -1.98
CPNE3-202ENST00000517391 TRAV13-1A0A0B4J241 112 aa2.66□□□□□ -1.98
CPNE3-202ENST00000517391 LOC107984640A0A0U1RRK4 108 aa2.66□□□□□ -1.98
CPNE3-202ENST00000517391 F8VRH5 84 aa2.66□□□□□ -1.98
CPNE3-202ENST00000517391 CRYGAP11844 174 aa2.66□□□□□ -1.98
CPNE3-202ENST00000517391 LINC00313P59037 77 aa2.66□□□□□ -1.98
CPNE3-202ENST00000517391 TMEM258P61165 79 aa2.66□□□□□ -1.98
CPNE3-202ENST00000517391 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.98
CPNE3-202ENST00000517391 HERC1Q15751 4861 aa2.65□□□□□ -1.98
CPNE3-202ENST00000517391 A0A096LNI7 61 aa2.65□□□□□ -1.99
CPNE3-202ENST00000517391 H3BT86 120 aa2.65□□□□□ -1.99
CPNE3-202ENST00000517391 CCDC179H3BU77 68 aa2.65□□□□□ -1.99
CPNE3-202ENST00000517391 HERVK_113P63121 156 aa2.65□□□□□ -1.99
CPNE3-202ENST00000517391 TMEM170BQ5T4T1 132 aa2.65□□□□□ -1.99
CPNE3-202ENST00000517391 SPINK6Q6UWN8 80 aa2.65□□□□□ -1.99
CPNE3-202ENST00000517391 ANKRD29Q8N6D5 301 aa2.65□□□□□ -1.99
CPNE3-202ENST00000517391 MRPL35Q9NZE8 188 aaKnown RBP2.65□□□□□ -1.99
CPNE3-202ENST00000517391 PRO1854Q9UHT4 67 aa2.65□□□□□ -1.99
CPNE3-202ENST00000517391 DNAH8Q96JB1 4490 aa2.64□□□□□ -1.99
CPNE3-202ENST00000517391 TRBV30A0A0K0K1B3 111 aa2.64□□□□□ -1.99
CPNE3-202ENST00000517391 TRBV10-2A0A0K0K1G8 114 aa2.64□□□□□ -1.99
CPNE3-202ENST00000517391 A0A1W2PNM2 257 aa2.64□□□□□ -1.99
CPNE3-202ENST00000517391 NDUFA1O15239 70 aa2.64□□□□□ -1.99
CPNE3-202ENST00000517391 NDUFC2O95298 119 aa2.64□□□□□ -1.99
CPNE3-202ENST00000517391 TCL1BO95988 128 aa2.64□□□□□ -1.99
CPNE3-202ENST00000517391 RPL39P62891 51 aaKnown RBP2.64□□□□□ -1.99
CPNE3-202ENST00000517391 SPAG11BQ08648 103 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms