RNA–Protein interactions for RNA: ENST00000517354.5

CPNE3-201, Transcript of copine 3, humanhuman

TSL 4

Gene CPNE3, Length 566 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-201ENST00000517354 WFDC10AQ9H1F0 79 aa2.15□□□□□ -2.07
CPNE3-201ENST00000517354 KANTRA0A1W2PQU2 76 aa2.14□□□□□ -2.07
CPNE3-201ENST00000517354 F2Z2F3 143 aa2.14□□□□□ -2.07
CPNE3-201ENST00000517354 IFI6P09912 130 aa2.14□□□□□ -2.07
CPNE3-201ENST00000517354 CFAP126Q5VTH2 177 aa2.14□□□□□ -2.07
CPNE3-201ENST00000517354 Q6ZSA8 131 aa2.14□□□□□ -2.07
CPNE3-201ENST00000517354 FRAS1Q86XX4 4008 aa2.14□□□□□ -2.07
CPNE3-201ENST00000517354 KIAA1109Q2LD37 5005 aa2.13□□□□□ -2.07
CPNE3-201ENST00000517354 A0A0J9YY99 117 aa2.13□□□□□ -2.07
CPNE3-201ENST00000517354 IGLV3-1P01715 115 aa2.13□□□□□ -2.07
CPNE3-201ENST00000517354 ANGP03950 147 aaKnown RBP2.13□□□□□ -2.07
CPNE3-201ENST00000517354 LINC01600Q96MT4 127 aa2.13□□□□□ -2.07
CPNE3-201ENST00000517354 NDUFA4L2Q9NRX3 87 aa2.13□□□□□ -2.07
CPNE3-201ENST00000517354 HMGN3Q15651 99 aa2.12□□□□□ -2.07
CPNE3-201ENST00000517354 ZNF56Q15929 161 aa2.12□□□□□ -2.07
CPNE3-201ENST00000517354 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
CPNE3-201ENST00000517354 C20orf197Q8N268 126 aa2.12□□□□□ -2.07
CPNE3-201ENST00000517354 CDC42SE2Q9NRR3 84 aa2.12□□□□□ -2.07
CPNE3-201ENST00000517354 TRBV25-1A0A075B6N4 114 aa2.11□□□□□ -2.07
CPNE3-201ENST00000517354 COX6CP09669 75 aa2.11□□□□□ -2.07
CPNE3-201ENST00000517354 ABCA13Q86UQ4 5058 aa2.1□□□□□ -2.07
CPNE3-201ENST00000517354 TMEM14DPA8MWL7 114 aa2.1□□□□□ -2.07
CPNE3-201ENST00000517354 F8WEM9 126 aa2.1□□□□□ -2.07
CPNE3-201ENST00000517354 HMGN4O00479 90 aa2.1□□□□□ -2.07
CPNE3-201ENST00000517354 BCE1O60756 84 aa2.1□□□□□ -2.07
CPNE3-201ENST00000517354 IGHV3-30P01768 117 aa2.1□□□□□ -2.07
CPNE3-201ENST00000517354 IGHV3-30-5P0DP03 117 aa2.1□□□□□ -2.07
CPNE3-201ENST00000517354 LINC00643Q86TS7 51 aa2.1□□□□□ -2.07
CPNE3-201ENST00000517354 HUWE1Q7Z6Z7 4374 aaKnown RBP2.09□□□□□ -2.07
CPNE3-201ENST00000517354 UBR4Q5T4S7 5183 aa2.09□□□□□ -2.07
CPNE3-201ENST00000517354 LOC101927531A0A1B0GV80 90 aa2.09□□□□□ -2.07
CPNE3-201ENST00000517354 H3BUX3 64 aa2.09□□□□□ -2.07
CPNE3-201ENST00000517354 LY6G6CO95867 125 aa2.09□□□□□ -2.07
CPNE3-201ENST00000517354 PDE6GP18545 87 aa2.09□□□□□ -2.07
CPNE3-201ENST00000517354 TMEM170BQ5T4T1 132 aa2.09□□□□□ -2.07
CPNE3-201ENST00000517354 HECTD4Q9Y4D8 3996 aa2.09□□□□□ -2.08
CPNE3-201ENST00000517354 HERC1Q15751 4861 aa2.09□□□□□ -2.08
CPNE3-201ENST00000517354 STARD9Q9P2P6 4700 aa2.08□□□□□ -2.08
CPNE3-201ENST00000517354 C7orf77A4D0Y5 90 aa2.08□□□□□ -2.08
CPNE3-201ENST00000517354 FAM223BA6NKX1 122 aa2.08□□□□□ -2.08
CPNE3-201ENST00000517354 IQCF6A8MYZ5 107 aa2.08□□□□□ -2.08
CPNE3-201ENST00000517354 UMAD1C9J7I0 102 aa2.08□□□□□ -2.08
CPNE3-201ENST00000517354 PPP1R17O96001 155 aa2.08□□□□□ -2.08
CPNE3-201ENST00000517354 ACYP1P07311 99 aa2.08□□□□□ -2.08
CPNE3-201ENST00000517354 CCL3L1P16619 93 aa2.08□□□□□ -2.08
CPNE3-201ENST00000517354 SMIM11AP58511 58 aa2.08□□□□□ -2.08
CPNE3-201ENST00000517354 ELOF1P60002 83 aaKnown RBP2.08□□□□□ -2.08
CPNE3-201ENST00000517354 GNGT1P63211 74 aa2.08□□□□□ -2.08
CPNE3-201ENST00000517354 SSBP1Q04837 148 aaKnown RBP2.08□□□□□ -2.08
CPNE3-201ENST00000517354 TMEM14BQ9NUH8 114 aa2.08□□□□□ -2.08
CPNE3-201ENST00000517354 PSENENQ9NZ42 101 aa2.08□□□□□ -2.08
CPNE3-201ENST00000517354 LENEPQ9Y5L5 61 aa2.08□□□□□ -2.08
CPNE3-201ENST00000517354 ZNF815PA8K554 130 aa2.07□□□□□ -2.08
CPNE3-201ENST00000517354 HIGD1CA8MV81 97 aa2.07□□□□□ -2.08
CPNE3-201ENST00000517354 HMGN2P05204 90 aaKnown RBP2.07□□□□□ -2.08
CPNE3-201ENST00000517354 SMIM13P0DJ93 91 aa2.07□□□□□ -2.08
CPNE3-201ENST00000517354 PSMG4Q5JS54 123 aa2.07□□□□□ -2.08
CPNE3-201ENST00000517354 PLECQ15149 4684 aaKnown RBP2.07□□□□□ -2.08
CPNE3-201ENST00000517354 ALMS1Q8TCU4 4167 aa2.06□□□□□ -2.08
CPNE3-201ENST00000517354 NBDYA0A0U1RRE5 68 aa2.06□□□□□ -2.08
CPNE3-201ENST00000517354 RPL37AP61513 92 aaKnown RBP2.06□□□□□ -2.08
CPNE3-201ENST00000517354 SPAG11BQ08648 103 aa2.06□□□□□ -2.08
CPNE3-201ENST00000517354 SPAG11AQ6PDA7 123 aa2.06□□□□□ -2.08
CPNE3-201ENST00000517354 COX7B2Q8TF08 81 aa2.06□□□□□ -2.08
CPNE3-201ENST00000517354 KAAG1Q9UBP8 84 aa2.06□□□□□ -2.08
CPNE3-201ENST00000517354 ARL2-SNX15V9GYD0 113 aa2.06□□□□□ -2.08
CPNE3-201ENST00000517354 SRRM2Q9UQ35 2752 aaKnown RBP2.06□□□□□ -2.08
CPNE3-201ENST00000517354 DMBT1Q9UGM3 2413 aaPredicted RBP2.06□□□□□ -2.08
CPNE3-201ENST00000517354 M0R1W7 72 aa2.05□□□□□ -2.08
CPNE3-201ENST00000517354 V9GYH0 126 aa2.05□□□□□ -2.08
CPNE3-201ENST00000517354 DNAH10Q8IVF4 4471 aa2.05□□□□□ -2.08
CPNE3-201ENST00000517354 PKHD1P08F94 4074 aa2.05□□□□□ -2.08
CPNE3-201ENST00000517354 A0A087WWC5 75 aa2.04□□□□□ -2.08
CPNE3-201ENST00000517354 MYMXA0A1B0GTQ4 84 aa2.04□□□□□ -2.08
CPNE3-201ENST00000517354 NCR3O14931 201 aa2.04□□□□□ -2.08
CPNE3-201ENST00000517354 XAF1Q6GPH4 301 aa2.04□□□□□ -2.08
CPNE3-201ENST00000517354 KMT2AQ03164 3969 aa2.04□□□□□ -2.08
CPNE3-201ENST00000517354 A0A087WTM6 91 aa2.03□□□□□ -2.08
CPNE3-201ENST00000517354 SAA2P0DJI9 122 aaPredicted RBP2.03□□□□□ -2.08
CPNE3-201ENST00000517354 ARL14EPLP0DKL9 152 aa2.03□□□□□ -2.08
CPNE3-201ENST00000517354 FXYD3Q14802 87 aa2.03□□□□□ -2.08
CPNE3-201ENST00000517354 PRR15LQ9BU68 103 aa2.03□□□□□ -2.08
CPNE3-201ENST00000517354 TNCP24821 2201 aa2.02□□□□□ -2.09
CPNE3-201ENST00000517354 CCL18P55774 89 aa2.02□□□□□ -2.09
CPNE3-201ENST00000517354 CAV3P56539 151 aa2.02□□□□□ -2.09
CPNE3-201ENST00000517354 M0R3E3 92 aa2.01□□□□□ -2.09
CPNE3-201ENST00000517354 SFTA3P0C7M3 94 aa2.01□□□□□ -2.09
CPNE3-201ENST00000517354 ARMS2P0C7Q2 107 aa2.01□□□□□ -2.09
CPNE3-201ENST00000517354 PLGLAQ15195 96 aa2.01□□□□□ -2.09
CPNE3-201ENST00000517354 MINOS1Q5TGZ0 78 aa2.01□□□□□ -2.09
CPNE3-201ENST00000517354 RPS27LQ71UM5 84 aaKnown RBP2.01□□□□□ -2.09
CPNE3-201ENST00000517354 C5orf56Q8N8D9 126 aa2.01□□□□□ -2.09
CPNE3-201ENST00000517354 PPP1R1CQ8WVI7 109 aa2.01□□□□□ -2.09
CPNE3-201ENST00000517354 HILPDAQ9Y5L2 63 aa2.01□□□□□ -2.09
CPNE3-201ENST00000517354 A0A1B0GWA3 101 aa2□□□□□ -2.09
CPNE3-201ENST00000517354 CEBPZOSA8MTT3 80 aa2□□□□□ -2.09
CPNE3-201ENST00000517354 F8VRH5 84 aa2□□□□□ -2.09
CPNE3-201ENST00000517354 LEPROTL1O95214 131 aa2□□□□□ -2.09
CPNE3-201ENST00000517354 C10orf99Q6UWK7 81 aa2□□□□□ -2.09
CPNE3-201ENST00000517354 Q86TA4 180 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms