RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 LSM10Q969L4 123 aaKnown RBP-4.95□□□□□ -3.2
SNORA40.16-201ENST00000517238 CEP19Q96LK0 163 aa-4.95□□□□□ -3.2
SNORA40.16-201ENST00000517238 ZFYVE16Q7Z3T8 1539 aa-4.96□□□□□ -3.2
SNORA40.16-201ENST00000517238 IQCF6A8MYZ5 107 aa-4.96□□□□□ -3.2
SNORA40.16-201ENST00000517238 MINOS1Q5TGZ0 78 aa-4.96□□□□□ -3.2
SNORA40.16-201ENST00000517238 THOC2Q8NI27 1593 aaKnown RBP-4.96□□□□□ -3.2
SNORA40.16-201ENST00000517238 TFAMQ00059 246 aaKnown RBP-4.97□□□□□ -3.21
SNORA40.16-201ENST00000517238 C1orf54Q8WWF1 131 aa-4.97□□□□□ -3.21
SNORA40.16-201ENST00000517238 RERGLQ9H628 205 aa-4.97□□□□□ -3.21
SNORA40.16-201ENST00000517238 SPHKAPQ2M3C7 1700 aa-4.97□□□□□ -3.21
SNORA40.16-201ENST00000517238 HSBP1L1C9JCN9 74 aa-4.98□□□□□ -3.21
SNORA40.16-201ENST00000517238 GSKIPQ9P0R6 139 aa-4.98□□□□□ -3.21
SNORA40.16-201ENST00000517238 DOT1LQ8TEK3 1739 aa-4.99□□□□□ -3.21
SNORA40.16-201ENST00000517238 TRAV36DV7A0A075B6V5 113 aa-4.99□□□□□ -3.21
SNORA40.16-201ENST00000517238 TRAV21A0A0B4J279 112 aa-4.99□□□□□ -3.21
SNORA40.16-201ENST00000517238 D6R8Y8 96 aa-4.99□□□□□ -3.21
SNORA40.16-201ENST00000517238 NCBP2-AS2Q69YL0 99 aa-4.99□□□□□ -3.21
SNORA40.16-201ENST00000517238 MUSTN1Q8IVN3 82 aa-4.99□□□□□ -3.21
SNORA40.16-201ENST00000517238 SCAPERQ9BY12 1400 aa-4.99□□□□□ -3.21
SNORA40.16-201ENST00000517238 TSTD3H0UI37 97 aa-5□□□□□ -3.21
SNORA40.16-201ENST00000517238 LINC00694P0DN24 101 aa-5□□□□□ -3.21
SNORA40.16-201ENST00000517238 FCER1GP30273 86 aa-5□□□□□ -3.21
SNORA40.16-201ENST00000517238 C8orf59Q8N0T1 100 aaPredicted RBP-5□□□□□ -3.21
SNORA40.16-201ENST00000517238 BAZ1AQ9NRL2 1556 aaPredicted RBP-5□□□□□ -3.21
SNORA40.16-201ENST00000517238 CDH23Q9H251 3354 aa-5.01□□□□□ -3.21
SNORA40.16-201ENST00000517238 TPM2P07951 284 aa-5.01□□□□□ -3.21
SNORA40.16-201ENST00000517238 TPM1P09493 284 aa-5.01□□□□□ -3.21
SNORA40.16-201ENST00000517238 TSPAN19P0C672 248 aa-5.01□□□□□ -3.21
SNORA40.16-201ENST00000517238 ALKAL2Q6UX46 152 aa-5.01□□□□□ -3.21
SNORA40.16-201ENST00000517238 CGREF1Q99674 301 aa-5.01□□□□□ -3.21
SNORA40.16-201ENST00000517238 RGPD1P0DJD0 1748 aa-5.01□□□□□ -3.21
SNORA40.16-201ENST00000517238 DDX60LQ5H9U9 1706 aaKnown RBP-5.01□□□□□ -3.21
SNORA40.16-201ENST00000517238 CCNB3Q8WWL7 1395 aa-5.02□□□□□ -3.21
SNORA40.16-201ENST00000517238 PMCHL1Q16048 86 aa-5.02□□□□□ -3.21
SNORA40.16-201ENST00000517238 ACBD7Q8N6N7 88 aa-5.02□□□□□ -3.21
SNORA40.16-201ENST00000517238 COPS9Q8WXC6 57 aa-5.02□□□□□ -3.21
SNORA40.16-201ENST00000517238 CRYM-AS1A6NIL9 109 aa-5.03□□□□□ -3.21
SNORA40.16-201ENST00000517238 M0QX08 132 aa-5.03□□□□□ -3.21
SNORA40.16-201ENST00000517238 SAMD13Q5VXD3 122 aa-5.03□□□□□ -3.21
SNORA40.16-201ENST00000517238 PDCD10Q9BUL8 212 aa-5.03□□□□□ -3.21
SNORA40.16-201ENST00000517238 ITSN1Q15811 1721 aa-5.03□□□□□ -3.22
SNORA40.16-201ENST00000517238 NAP1L6A6NFF2 107 aa-5.04□□□□□ -3.22
SNORA40.16-201ENST00000517238 J3QR89 54 aa-5.04□□□□□ -3.22
SNORA40.16-201ENST00000517238 CHD1O14646 1710 aa-5.04□□□□□ -3.22
SNORA40.16-201ENST00000517238 PPLO60437 1756 aa-5.04□□□□□ -3.22
SNORA40.16-201ENST00000517238 CFTRP13569 1480 aa-5.05□□□□□ -3.22
SNORA40.16-201ENST00000517238 TRBV25-1A0A075B6N4 114 aa-5.05□□□□□ -3.22
SNORA40.16-201ENST00000517238 C6orf48Q9UBA6 75 aa-5.05□□□□□ -3.22
SNORA40.16-201ENST00000517238 ATP6V1DQ9Y5K8 247 aa-5.05□□□□□ -3.22
SNORA40.16-201ENST00000517238 SYNMO15061 1565 aa-5.05□□□□□ -3.22
SNORA40.16-201ENST00000517238 OVOS2A0A0J9YW53 1432 aa-5.06□□□□□ -3.22
SNORA40.16-201ENST00000517238 OVOS2Q6IE36 1432 aa-5.06□□□□□ -3.22
SNORA40.16-201ENST00000517238 TOMM20LQ6UXN7 152 aa-5.06□□□□□ -3.22
SNORA40.16-201ENST00000517238 C20orf78Q9BR46 151 aa-5.06□□□□□ -3.22
SNORA40.16-201ENST00000517238 A0A1B0GUT8 65 aa-5.07□□□□□ -3.22
SNORA40.16-201ENST00000517238 K7ERU9 68 aa-5.07□□□□□ -3.22
SNORA40.16-201ENST00000517238 PPP1R14BQ96C90 147 aa-5.07□□□□□ -3.22
SNORA40.16-201ENST00000517238 DEFB131BA0A096LNP1 70 aa-5.08□□□□□ -3.22
SNORA40.16-201ENST00000517238 SMCO1Q147U7 214 aa-5.08□□□□□ -3.22
SNORA40.16-201ENST00000517238 CACFD1Q9UGQ2 172 aa-5.08□□□□□ -3.22
SNORA40.16-201ENST00000517238 ATPIF1Q9UII2 106 aa-5.08□□□□□ -3.22
SNORA40.16-201ENST00000517238 BRCA2P51587 3418 aa-5.09□□□□□ -3.22
SNORA40.16-201ENST00000517238 CATR1Q13166 79 aa-5.09□□□□□ -3.22
SNORA40.16-201ENST00000517238 HMGN3Q15651 99 aa-5.09□□□□□ -3.22
SNORA40.16-201ENST00000517238 AIF1LQ9BQI0 150 aa-5.09□□□□□ -3.22
SNORA40.16-201ENST00000517238 GINS2Q9Y248 185 aa-5.09□□□□□ -3.22
SNORA40.16-201ENST00000517238 NEXMIFQ5QGS0 1516 aa-5.09□□□□□ -3.22
SNORA40.16-201ENST00000517238 CLASP1Q7Z460 1538 aa-5.09□□□□□ -3.22
SNORA40.16-201ENST00000517238 ABCC2Q92887 1545 aa-5.09□□□□□ -3.22
SNORA40.16-201ENST00000517238 PREX2Q70Z35 1606 aa-5.09□□□□□ -3.22
SNORA40.16-201ENST00000517238 MAP3K4Q9Y6R4 1608 aa-5.1□□□□□ -3.23
SNORA40.16-201ENST00000517238 LTN1O94822 1766 aa-5.11□□□□□ -3.23
SNORA40.16-201ENST00000517238 CCDC153Q494R4 210 aa-5.11□□□□□ -3.23
SNORA40.16-201ENST00000517238 MORN2Q502X0 79 aa-5.12□□□□□ -3.23
SNORA40.16-201ENST00000517238 CCDC167Q9P0B6 97 aa-5.12□□□□□ -3.23
SNORA40.16-201ENST00000517238 KIF14Q15058 1648 aa-5.12□□□□□ -3.23
SNORA40.16-201ENST00000517238 MRPL33O75394 65 aaKnown RBP-5.13□□□□□ -3.23
SNORA40.16-201ENST00000517238 TPM3P06753 285 aa-5.13□□□□□ -3.23
SNORA40.16-201ENST00000517238 CC2D2AQ9P2K1 1620 aa-5.13□□□□□ -3.23
SNORA40.16-201ENST00000517238 CRIP1P50238 77 aa-5.14□□□□□ -3.23
SNORA40.16-201ENST00000517238 SMIM3Q9BZL3 60 aa-5.14□□□□□ -3.23
SNORA40.16-201ENST00000517238 XIRP2A4UGR9 3374 aa-5.14□□□□□ -3.23
SNORA40.16-201ENST00000517238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-5.14□□□□□ -3.23
SNORA40.16-201ENST00000517238 TJP1Q07157 1748 aa-5.14□□□□□ -3.23
SNORA40.16-201ENST00000517238 S100A8P05109 93 aa-5.15□□□□□ -3.23
SNORA40.16-201ENST00000517238 UQCRHP07919 91 aa-5.15□□□□□ -3.23
SNORA40.16-201ENST00000517238 ATP5EP56381 51 aaPredicted RBP-5.15□□□□□ -3.23
SNORA40.16-201ENST00000517238 HOPXQ9BPY8 73 aaPredicted RBP-5.15□□□□□ -3.23
SNORA40.16-201ENST00000517238 DPH3P1Q9H4G8 78 aa-5.15□□□□□ -3.23
SNORA40.16-201ENST00000517238 NRXN3Q9Y4C0 1643 aa-5.15□□□□□ -3.23
SNORA40.16-201ENST00000517238 M0R2Z0 102 aa-5.16□□□□□ -3.24
SNORA40.16-201ENST00000517238 APOC2P02655 101 aa-5.16□□□□□ -3.24
SNORA40.16-201ENST00000517238 ETDBQ3ZM63 59 aa-5.16□□□□□ -3.24
SNORA40.16-201ENST00000517238 CYB5AP00167 134 aa-5.17□□□□□ -3.24
SNORA40.16-201ENST00000517238 RPL13AP3Q6NVV1 102 aa-5.17□□□□□ -3.24
SNORA40.16-201ENST00000517238 FHAD1B1AJZ9 1412 aa-5.17□□□□□ -3.24
SNORA40.16-201ENST00000517238 NDUFA4O00483 81 aa-5.18□□□□□ -3.24
SNORA40.16-201ENST00000517238 CTXN2P0C2S0 81 aa-5.18□□□□□ -3.24
SNORA40.16-201ENST00000517238 S100GP29377 79 aa-5.18□□□□□ -3.24
SNORA40.16-201ENST00000517238 IFI27P40305 119 aaPredicted RBP-5.18□□□□□ -3.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms