RNA–Protein interactions for RNA: ENST00000517114.1

SCARNA16.5-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.5-201ENST00000517114 TRBV19A0A075B6N1 114 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 TRAV36DV7A0A075B6V5 113 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 A0A096LPI6 279 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 A0A1W2PPV4 95 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 MAP1LC3B2A6NCE7 125 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 LINC00862A6NCI5 91 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 IGIPA6NJ69 53 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 TMEM210A6NLX4 147 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SNRPGP15A8MWD9 76 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 MIF4GDA9UHW6 222 aaKnown RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 MCRIP1C9JLW8 97 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 ZNF670-ZNF695F2Z2N8 137 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 F8W1H4 67 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SMLR1H3BR10 107 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 H3BUA1 57 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 GABARAPH6UMI1 98 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 K7EN84 100 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 TAX1BP3O14907 124 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 UQCRQO14949 82 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FABP7O15540 132 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 NDUFA2O43678 99 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 PDE6DO43924 150 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 STX10O60499 249 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CREBL2O60519 120 aaPredicted RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 EDF1O60869 148 aaKnown RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 HYPMO75409 117 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 DHFRP00374 187 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FTH1P02794 183 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FABP1P07148 127 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 LINC00032P0C843 101 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 HIST1H1EP10412 219 aaKnown RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 RALBP11234 206 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FABP4P15090 132 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 HIST1H1BP16401 226 aaKnown RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 HIST1H1DP16402 221 aaKnown RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 MYL12AP19105 171 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 PVALBP20472 110 aaPredicted RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CASQ1P31415 396 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SDC4P31431 198 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CKS2P33552 79 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 IFI27P40305 119 aaPredicted RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SERPINB10P48595 397 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 BCAP31P51572 246 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 POLR2JP52435 117 aaKnown RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 H2BFSP57053 126 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 ARPC4P59998 168 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 PSME3P61289 254 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 ATP6V0D1P61421 351 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 HSPE1P61604 102 aaKnown RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 COPZ1P61923 177 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SNRPGP62308 76 aaKnown RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 RPL38P63173 70 aaKnown RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 PSPHP78330 225 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 S100A12P80511 92 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CDK6Q00534 326 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FABP5Q01469 135 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 MLLT11Q13015 90 aaPredicted RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SMCO1Q147U7 214 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 RHEBQ15382 184 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 HMGN3Q15651 99 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 NREPQ16612 68 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 GUK1Q16774 197 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 Q1T7F1 81 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SCGB2B2Q4G0G5 96 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CENPWQ5EE01 88 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 NMSQ5H8A3 153 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SPANXN5Q5MJ07 72 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FAM27BQ5VT28 67 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 PPP1R2P3Q6NXS1 205 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 MRPL54Q6P161 138 aaKnown RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 DCUN1D2Q6PH85 259 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 TTC33Q6PID6 262 aaPredicted RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 C5orf46Q6UWT4 87 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 KTN1-AS1Q86SY8 53 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 TEN1Q86WV5 123 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 STX12Q86Y82 276 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 MNS1Q8NEH6 495 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 OTOSQ8NHW6 89 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SCGB1C1Q8TD33 95 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 DYDC1Q8WWB3 177 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 NELFBQ8WX92 580 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 LZICQ8WZA0 190 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SPTSSAQ969W0 71 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 PTH2Q96A98 100 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CHCHD1Q96BP2 118 aaKnown RBP-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SMIM19Q96E16 107 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FMC1Q96HJ9 113 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SCGB3A2Q96PL1 93 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 TSGA13Q96PP4 275 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CHP1Q99653 195 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CIB1Q99828 191 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 AIF1LQ9BQI0 150 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 PDCD10Q9BUL8 212 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 EFCAB11Q9BUY7 163 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 NPCDR1Q9BY65 106 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 PKIBQ9C010 78 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 MAP1LC3BQ9GZQ8 125 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 ATG5Q9H1Y0 275 aa-0.19□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SH3BGRL3Q9H299 93 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms