RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 MLH3Q9UHC1 1453 aa-6.05□□□□□ -3.38
RNU6-539P-201ENST00000516665 H3BUA1 57 aa-6.06□□□□□ -3.38
RNU6-539P-201ENST00000516665 K7ERU9 68 aa-6.06□□□□□ -3.38
RNU6-539P-201ENST00000516665 ANKRD36BQ8N2N9 1353 aa-6.06□□□□□ -3.38
RNU6-539P-201ENST00000516665 SCAPERQ9BY12 1400 aa-6.07□□□□□ -3.38
RNU6-539P-201ENST00000516665 DOT1LQ8TEK3 1739 aa-6.07□□□□□ -3.38
RNU6-539P-201ENST00000516665 TMEM218A2RU14 115 aa-6.07□□□□□ -3.38
RNU6-539P-201ENST00000516665 MIF4GDA9UHW6 222 aaKnown RBP-6.07□□□□□ -3.38
RNU6-539P-201ENST00000516665 J3QR89 54 aa-6.07□□□□□ -3.38
RNU6-539P-201ENST00000516665 BVES-AS1Q5T3Y7 98 aa-6.07□□□□□ -3.38
RNU6-539P-201ENST00000516665 BAZ1AQ9NRL2 1556 aaPredicted RBP-6.08□□□□□ -3.38
RNU6-539P-201ENST00000516665 TRIQKQ629K1 86 aa-6.08□□□□□ -3.38
RNU6-539P-201ENST00000516665 CROCC2H7BZ55 1655 aa-6.08□□□□□ -3.38
RNU6-539P-201ENST00000516665 SMCO1Q147U7 214 aa-6.09□□□□□ -3.38
RNU6-539P-201ENST00000516665 SMIM3Q9BZL3 60 aa-6.09□□□□□ -3.38
RNU6-539P-201ENST00000516665 GID8Q9NWU2 228 aa-6.09□□□□□ -3.38
RNU6-539P-201ENST00000516665 LRRIQ1Q96JM4 1722 aa-6.09□□□□□ -3.38
RNU6-539P-201ENST00000516665 ZC3H13Q5T200 1668 aaKnown RBP-6.1□□□□□ -3.39
RNU6-539P-201ENST00000516665 CCDC153Q494R4 210 aa-6.1□□□□□ -3.39
RNU6-539P-201ENST00000516665 CGREF1Q99674 301 aa-6.1□□□□□ -3.39
RNU6-539P-201ENST00000516665 PCBD2Q9H0N5 130 aa-6.1□□□□□ -3.39
RNU6-539P-201ENST00000516665 CATR1Q13166 79 aa-6.11□□□□□ -3.39
RNU6-539P-201ENST00000516665 COPS9Q8WXC6 57 aa-6.11□□□□□ -3.39
RNU6-539P-201ENST00000516665 MED14O60244 1454 aa-6.11□□□□□ -3.39
RNU6-539P-201ENST00000516665 TRBV25-1A0A075B6N4 114 aa-6.12□□□□□ -3.39
RNU6-539P-201ENST00000516665 S100GP29377 79 aa-6.12□□□□□ -3.39
RNU6-539P-201ENST00000516665 KIAA0586Q9BVV6 1533 aa-6.12□□□□□ -3.39
RNU6-539P-201ENST00000516665 PLIN4Q96Q06 1357 aa-6.13□□□□□ -3.39
RNU6-539P-201ENST00000516665 IQCF6A8MYZ5 107 aa-6.13□□□□□ -3.39
RNU6-539P-201ENST00000516665 ZNF436-AS1Q8NC38 126 aaPredicted RBP-6.13□□□□□ -3.39
RNU6-539P-201ENST00000516665 C1orf54Q8WWF1 131 aa-6.13□□□□□ -3.39
RNU6-539P-201ENST00000516665 CHD1O14646 1710 aa-6.13□□□□□ -3.39
RNU6-539P-201ENST00000516665 NAP1L6A6NFF2 107 aa-6.14□□□□□ -3.39
RNU6-539P-201ENST00000516665 CRYM-AS1A6NIL9 109 aa-6.14□□□□□ -3.39
RNU6-539P-201ENST00000516665 CCDC167Q9P0B6 97 aa-6.14□□□□□ -3.39
RNU6-539P-201ENST00000516665 CACFD1Q9UGQ2 172 aa-6.14□□□□□ -3.39
RNU6-539P-201ENST00000516665 DDX60LQ5H9U9 1706 aaKnown RBP-6.14□□□□□ -3.39
RNU6-539P-201ENST00000516665 ATP10BO94823 1461 aa-6.15□□□□□ -3.39
RNU6-539P-201ENST00000516665 D6R8Y8 96 aa-6.15□□□□□ -3.39
RNU6-539P-201ENST00000516665 MUSTN1Q8IVN3 82 aa-6.15□□□□□ -3.39
RNU6-539P-201ENST00000516665 GINS2Q9Y248 185 aa-6.15□□□□□ -3.39
RNU6-539P-201ENST00000516665 CC2D2AQ9P2K1 1620 aa-6.16□□□□□ -3.4
RNU6-539P-201ENST00000516665 PMCHL1Q16048 86 aa-6.16□□□□□ -3.4
RNU6-539P-201ENST00000516665 SKA2Q8WVK7 121 aaPredicted RBP-6.16□□□□□ -3.4
RNU6-539P-201ENST00000516665 DPH3P1Q9H4G8 78 aa-6.16□□□□□ -3.4
RNU6-539P-201ENST00000516665 GSKIPQ9P0R6 139 aa-6.16□□□□□ -3.4
RNU6-539P-201ENST00000516665 FHAD1B1AJZ9 1412 aa-6.16□□□□□ -3.4
RNU6-539P-201ENST00000516665 M0R2Z0 102 aa-6.17□□□□□ -3.4
RNU6-539P-201ENST00000516665 CCDC58Q4VC31 144 aa-6.17□□□□□ -3.4
RNU6-539P-201ENST00000516665 NCBP2-AS2Q69YL0 99 aa-6.17□□□□□ -3.4
RNU6-539P-201ENST00000516665 ITSN1Q15811 1721 aa-6.17□□□□□ -3.4
RNU6-539P-201ENST00000516665 OOSP1A8MZH6 123 aa-6.18□□□□□ -3.4
RNU6-539P-201ENST00000516665 COPZ1P61923 177 aa-6.19□□□□□ -3.4
RNU6-539P-201ENST00000516665 SFTA3P0C7M3 94 aa-6.2□□□□□ -3.4
RNU6-539P-201ENST00000516665 ALKAL2Q6UX46 152 aa-6.2□□□□□ -3.4
RNU6-539P-201ENST00000516665 LTN1O94822 1766 aa-6.21□□□□□ -3.4
RNU6-539P-201ENST00000516665 TRAV21A0A0B4J279 112 aa-6.21□□□□□ -3.4
RNU6-539P-201ENST00000516665 SPANXCQ9NY87 97 aa-6.21□□□□□ -3.4
RNU6-539P-201ENST00000516665 APOC2P02655 101 aa-6.22□□□□□ -3.41
RNU6-539P-201ENST00000516665 ABCC2Q92887 1545 aa-6.22□□□□□ -3.41
RNU6-539P-201ENST00000516665 CD163L1Q9NR16 1453 aa-6.22□□□□□ -3.41
RNU6-539P-201ENST00000516665 RPS25P62851 125 aaKnown RBP-6.23□□□□□ -3.41
RNU6-539P-201ENST00000516665 UBR1Q8IWV7 1749 aa-6.23□□□□□ -3.41
RNU6-539P-201ENST00000516665 M0QX08 132 aa-6.24□□□□□ -3.41
RNU6-539P-201ENST00000516665 ATP5EP56381 51 aaPredicted RBP-6.24□□□□□ -3.41
RNU6-539P-201ENST00000516665 NRXN1Q9ULB1 1477 aa-6.24□□□□□ -3.41
RNU6-539P-201ENST00000516665 CENPFP49454 3210 aa-6.24□□□□□ -3.41
RNU6-539P-201ENST00000516665 NCOA2Q15596 1464 aa-6.25□□□□□ -3.41
RNU6-539P-201ENST00000516665 MRPS10P82664 201 aaKnown RBP-6.25□□□□□ -3.41
RNU6-539P-201ENST00000516665 MINOS1Q5TGZ0 78 aa-6.25□□□□□ -3.41
RNU6-539P-201ENST00000516665 A0A1B0GUT8 65 aa-6.26□□□□□ -3.41
RNU6-539P-201ENST00000516665 NDUFC1O43677 76 aa-6.26□□□□□ -3.41
RNU6-539P-201ENST00000516665 HMGN3Q15651 99 aa-6.26□□□□□ -3.41
RNU6-539P-201ENST00000516665 HSPB11Q9Y547 144 aa-6.27□□□□□ -3.41
RNU6-539P-201ENST00000516665 ZFYVE16Q7Z3T8 1539 aa-6.27□□□□□ -3.41
RNU6-539P-201ENST00000516665 DR1Q01658 176 aa-6.28□□□□□ -3.41
RNU6-539P-201ENST00000516665 CCNB3Q8WWL7 1395 aa-6.29□□□□□ -3.42
RNU6-539P-201ENST00000516665 SPHKAPQ2M3C7 1700 aa-6.3□□□□□ -3.42
RNU6-539P-201ENST00000516665 THOC2Q8NI27 1593 aaKnown RBP-6.3□□□□□ -3.42
RNU6-539P-201ENST00000516665 A0A1B0GV72 72 aa-6.3□□□□□ -3.42
RNU6-539P-201ENST00000516665 UQCRHP07919 91 aa-6.3□□□□□ -3.42
RNU6-539P-201ENST00000516665 MEIG1Q5JSS6 88 aa-6.3□□□□□ -3.42
RNU6-539P-201ENST00000516665 DIP2BQ9P265 1576 aa-6.31□□□□□ -3.42
RNU6-539P-201ENST00000516665 ASPMQ8IZT6 3477 aa-6.31□□□□□ -3.42
RNU6-539P-201ENST00000516665 G0S2P27469 103 aa-6.31□□□□□ -3.42
RNU6-539P-201ENST00000516665 TSTD1Q8NFU3 115 aa-6.31□□□□□ -3.42
RNU6-539P-201ENST00000516665 RAPGEF2Q9Y4G8 1499 aa-6.31□□□□□ -3.42
RNU6-539P-201ENST00000516665 DEFB131BA0A096LNP1 70 aa-6.32□□□□□ -3.42
RNU6-539P-201ENST00000516665 FCER1GP30273 86 aa-6.33□□□□□ -3.42
RNU6-539P-201ENST00000516665 ETDBQ3ZM63 59 aa-6.33□□□□□ -3.42
RNU6-539P-201ENST00000516665 TTTY10Q9BZA0 68 aa-6.33□□□□□ -3.42
RNU6-539P-201ENST00000516665 MAP3K4Q9Y6R4 1608 aa-6.34□□□□□ -3.42
RNU6-539P-201ENST00000516665 TSTD3H0UI37 97 aa-6.34□□□□□ -3.42
RNU6-539P-201ENST00000516665 PPLO60437 1756 aa-6.34□□□□□ -3.42
RNU6-539P-201ENST00000516665 DNAH12Q6ZR08 3092 aa-6.34□□□□□ -3.42
RNU6-539P-201ENST00000516665 hADV29S1A0JD25 119 aa-6.35□□□□□ -3.43
RNU6-539P-201ENST00000516665 CRIP1P50238 77 aa-6.35□□□□□ -3.43
RNU6-539P-201ENST00000516665 DDA1Q9BW61 102 aa-6.35□□□□□ -3.43
RNU6-539P-201ENST00000516665 FAM24AA6NFZ4 105 aa-6.36□□□□□ -3.43
RNU6-539P-201ENST00000516665 KRTDAPP60985 99 aa-6.36□□□□□ -3.43
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms