RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 PRO3102Q9H379 93 aa0.31□□□□□ -2.36
SCARNA16.2-201ENST00000516520 BDP1A6H8Y1 2624 aa0.31□□□□□ -2.36
SCARNA16.2-201ENST00000516520 CLTCL1P53675 1640 aa0.31□□□□□ -2.36
SCARNA16.2-201ENST00000516520 CREBBPQ92793 2442 aa0.3□□□□□ -2.36
SCARNA16.2-201ENST00000516520 SPINK4O60575 86 aa0.3□□□□□ -2.36
SCARNA16.2-201ENST00000516520 NDUFA3O95167 84 aa0.3□□□□□ -2.36
SCARNA16.2-201ENST00000516520 SPRR1BP22528 89 aa0.3□□□□□ -2.36
SCARNA16.2-201ENST00000516520 MINOS1Q5TGZ0 78 aa0.3□□□□□ -2.36
SCARNA16.2-201ENST00000516520 DEFB105AQ8NG35 78 aa0.3□□□□□ -2.36
SCARNA16.2-201ENST00000516520 C6orf48Q9UBA6 75 aa0.3□□□□□ -2.36
SCARNA16.2-201ENST00000516520 CEP290O15078 2479 aa0.3□□□□□ -2.36
SCARNA16.2-201ENST00000516520 NCOR1O75376 2440 aa0.29□□□□□ -2.36
SCARNA16.2-201ENST00000516520 IAPPP10997 89 aa0.29□□□□□ -2.36
SCARNA16.2-201ENST00000516520 H1FX-AS1Q4G0G2 97 aa0.29□□□□□ -2.36
SCARNA16.2-201ENST00000516520 WFDC13Q8IUB5 93 aa0.29□□□□□ -2.36
SCARNA16.2-201ENST00000516520 LINC00308Q8TCZ7 52 aa0.29□□□□□ -2.36
SCARNA16.2-201ENST00000516520 APLNQ9ULZ1 77 aa0.29□□□□□ -2.36
SCARNA16.2-201ENST00000516520 ATRQ13535 2644 aa0.29□□□□□ -2.36
SCARNA16.2-201ENST00000516520 PCNX1Q96RV3 2341 aa0.29□□□□□ -2.36
SCARNA16.2-201ENST00000516520 MROH2BQ7Z745 1585 aa0.28□□□□□ -2.36
SCARNA16.2-201ENST00000516520 CHD6Q8TD26 2715 aa0.28□□□□□ -2.36
SCARNA16.2-201ENST00000516520 H3BUA1 57 aa0.28□□□□□ -2.36
SCARNA16.2-201ENST00000516520 SMIM2Q9BVW6 85 aa0.28□□□□□ -2.36
SCARNA16.2-201ENST00000516520 PTPN13Q12923 2485 aa0.28□□□□□ -2.36
SCARNA16.2-201ENST00000516520 CHD8Q9HCK8 2581 aa0.28□□□□□ -2.37
SCARNA16.2-201ENST00000516520 CELSR2Q9HCU4 2923 aa0.27□□□□□ -2.37
SCARNA16.2-201ENST00000516520 MAP1BP46821 2468 aaKnown RBP0.27□□□□□ -2.37
SCARNA16.2-201ENST00000516520 LOC730098B7Z3J9 87 aa0.27□□□□□ -2.37
SCARNA16.2-201ENST00000516520 NDUFA1O15239 70 aa0.27□□□□□ -2.37
SCARNA16.2-201ENST00000516520 DEFB130BP0DP73 79 aa0.27□□□□□ -2.37
SCARNA16.2-201ENST00000516520 DEFB130AP0DP74 79 aa0.27□□□□□ -2.37
SCARNA16.2-201ENST00000516520 RPS27P42677 84 aaKnown RBP0.27□□□□□ -2.37
SCARNA16.2-201ENST00000516520 SNRPGP62308 76 aaKnown RBP0.27□□□□□ -2.37
SCARNA16.2-201ENST00000516520 DEFB109BQ30KR1 87 aa0.27□□□□□ -2.37
SCARNA16.2-201ENST00000516520 LELP1Q5T871 98 aa0.27□□□□□ -2.37
SCARNA16.2-201ENST00000516520 RPS27LQ71UM5 84 aaKnown RBP0.27□□□□□ -2.37
SCARNA16.2-201ENST00000516520 PKD1L2Q7Z442 2459 aa0.27□□□□□ -2.37
SCARNA16.2-201ENST00000516520 HECTD1Q9ULT8 2610 aa0.27□□□□□ -2.37
SCARNA16.2-201ENST00000516520 DSPP15924 2871 aaKnown RBP0.27□□□□□ -2.37
SCARNA16.2-201ENST00000516520 GPR98Q8WXG9 6306 aa0.26□□□□□ -2.37
SCARNA16.2-201ENST00000516520 NBASA2RRP1 2371 aa0.26□□□□□ -2.37
SCARNA16.2-201ENST00000516520 EP300Q09472 2414 aaPredicted RBP0.26□□□□□ -2.37
SCARNA16.2-201ENST00000516520 ZFYVE26Q68DK2 2539 aa0.26□□□□□ -2.37
SCARNA16.2-201ENST00000516520 VWFP04275 2813 aa0.26□□□□□ -2.37
SCARNA16.2-201ENST00000516520 CHD9Q3L8U1 2897 aa0.26□□□□□ -2.37
SCARNA16.2-201ENST00000516520 IGLV5-48A0A075B6I7 105 aa0.26□□□□□ -2.37
SCARNA16.2-201ENST00000516520 DEFB131AP59861 70 aa0.26□□□□□ -2.37
SCARNA16.2-201ENST00000516520 WT1-ASQ06250 92 aa0.26□□□□□ -2.37
SCARNA16.2-201ENST00000516520 TIMM8BQ9Y5J9 83 aaPredicted RBP0.26□□□□□ -2.37
SCARNA16.2-201ENST00000516520 ZNF469Q96JG9 3925 aaPredicted RBP0.26□□□□□ -2.37
SCARNA16.2-201ENST00000516520 WNK1Q9H4A3 2382 aa0.26□□□□□ -2.37
SCARNA16.2-201ENST00000516520 TRANK1O15050 2925 aa0.26□□□□□ -2.37
SCARNA16.2-201ENST00000516520 REV3LO60673 3130 aa0.25□□□□□ -2.37
SCARNA16.2-201ENST00000516520 HIVEP3Q5T1R4 2406 aa0.25□□□□□ -2.37
SCARNA16.2-201ENST00000516520 ACACAQ13085 2346 aa0.25□□□□□ -2.37
SCARNA16.2-201ENST00000516520 KLK9Q2XQG4 91 aa0.25□□□□□ -2.37
SCARNA16.2-201ENST00000516520 SPINK6Q6UWN8 80 aa0.25□□□□□ -2.37
SCARNA16.2-201ENST00000516520 TENM4Q6N022 2769 aa0.25□□□□□ -2.37
SCARNA16.2-201ENST00000516520 SETD2Q9BYW2 2564 aaPredicted RBP0.25□□□□□ -2.37
SCARNA16.2-201ENST00000516520 NAV2Q8IVL1 2488 aa0.25□□□□□ -2.37
SCARNA16.2-201ENST00000516520 UNC79Q9P2D8 2635 aa0.24□□□□□ -2.37
SCARNA16.2-201ENST00000516520 AHNAKQ09666 5890 aaKnown RBP0.24□□□□□ -2.37
SCARNA16.2-201ENST00000516520 PRLHP81277 87 aa0.24□□□□□ -2.37
SCARNA16.2-201ENST00000516520 TFF3Q07654 80 aa0.24□□□□□ -2.37
SCARNA16.2-201ENST00000516520 DEFB106AQ8N104 65 aa0.24□□□□□ -2.37
SCARNA16.2-201ENST00000516520 SMR3AQ99954 134 aa0.24□□□□□ -2.37
SCARNA16.2-201ENST00000516520 NOP10Q9NPE3 64 aaKnown RBP0.24□□□□□ -2.37
SCARNA16.2-201ENST00000516520 S4R3F8 94 aa0.24□□□□□ -2.37
SCARNA16.2-201ENST00000516520 EPG5Q9HCE0 2579 aa0.24□□□□□ -2.37
SCARNA16.2-201ENST00000516520 FAM186AA6NE01 2351 aa0.24□□□□□ -2.37
SCARNA16.2-201ENST00000516520 APC2O95996 2303 aa0.24□□□□□ -2.37
SCARNA16.2-201ENST00000516520 RIF1Q5UIP0 2472 aaKnown RBP0.23□□□□□ -2.37
SCARNA16.2-201ENST00000516520 PRRC2CQ9Y520 2896 aaKnown RBP0.23□□□□□ -2.37
SCARNA16.2-201ENST00000516520 MMP24-AS1A0A0U1RRL7 71 aa0.23□□□□□ -2.37
SCARNA16.2-201ENST00000516520 H0YGG7 62 aa0.23□□□□□ -2.37
SCARNA16.2-201ENST00000516520 SPINK1P00995 79 aa0.23□□□□□ -2.37
SCARNA16.2-201ENST00000516520 WFDC10BQ8IUB3 73 aa0.23□□□□□ -2.37
SCARNA16.2-201ENST00000516520 KAAG1Q9UBP8 84 aa0.23□□□□□ -2.37
SCARNA16.2-201ENST00000516520 ACANP16112 2415 aa0.23□□□□□ -2.37
SCARNA16.2-201ENST00000516520 APCP25054 2843 aa0.23□□□□□ -2.37
SCARNA16.2-201ENST00000516520 LRRK2Q5S007 2527 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 AKAP13Q12802 2813 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 UBR5O95071 2799 aaPredicted RBP0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 A8MTW9 85 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 PHGR1C9JFL3 82 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 M0R2T5 61 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 KRTAP2-3P0C7H8 128 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 DEFB135Q30KP9 77 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 KRTAP19-3Q7Z4W3 81 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 KRTAP2-4Q9BYR9 128 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 KRTAP2-1Q9BYU5 128 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 U3KQA8 63 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 IGSF10Q6WRI0 2623 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 OTOGQ6ZRI0 2925 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 MTORP42345 2549 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 NCOR2Q9Y618 2525 aa0.22□□□□□ -2.37
SCARNA16.2-201ENST00000516520 SETXQ7Z333 2677 aaKnown RBP0.21□□□□□ -2.38
SCARNA16.2-201ENST00000516520 USP24Q9UPU5 2620 aa0.21□□□□□ -2.38
SCARNA16.2-201ENST00000516520 SPTBN4Q9H254 2564 aa0.21□□□□□ -2.38
SCARNA16.2-201ENST00000516520 SRRM2Q9UQ35 2752 aaKnown RBP0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms