RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 Q8N377 158 aa4.21□□□□□ -1.74
SCARNA6-201ENST00000515982 PKHD1L1Q86WI1 4243 aa4.2□□□□□ -1.74
SCARNA6-201ENST00000515982 KRTAP29-1A8MX34 341 aaPredicted RBP4.2□□□□□ -1.74
SCARNA6-201ENST00000515982 TMEM256-PLSCR3K7ERE1 68 aa4.2□□□□□ -1.74
SCARNA6-201ENST00000515982 TCL1BO95988 128 aa4.2□□□□□ -1.74
SCARNA6-201ENST00000515982 LINC01547P58512 204 aaPredicted RBP4.2□□□□□ -1.74
SCARNA6-201ENST00000515982 ANAPC11Q9NYG5 84 aa4.2□□□□□ -1.74
SCARNA6-201ENST00000515982 ORMDL1Q9P0S3 153 aa4.2□□□□□ -1.74
SCARNA6-201ENST00000515982 KRTAP10-8P60410 259 aa4.19□□□□□ -1.74
SCARNA6-201ENST00000515982 SSBP3-AS1Q7Z2R9 100 aa4.19□□□□□ -1.74
SCARNA6-201ENST00000515982 PRR26Q8N8Z3 221 aa4.19□□□□□ -1.74
SCARNA6-201ENST00000515982 TYMSOSQ8TAI1 123 aa4.19□□□□□ -1.74
SCARNA6-201ENST00000515982 A0A087X002 238 aa4.18□□□□□ -1.74
SCARNA6-201ENST00000515982 F8WEM9 126 aa4.18□□□□□ -1.74
SCARNA6-201ENST00000515982 BAALC-AS2P0C853 105 aa4.18□□□□□ -1.74
SCARNA6-201ENST00000515982 SMIM29Q86T20 159 aa4.18□□□□□ -1.74
SCARNA6-201ENST00000515982 SPCS1Q9Y6A9 102 aa4.18□□□□□ -1.74
SCARNA6-201ENST00000515982 IGLV9-49A0A0B4J1Y8 123 aa4.17□□□□□ -1.74
SCARNA6-201ENST00000515982 UBE2V1Q13404 147 aa4.17□□□□□ -1.74
SCARNA6-201ENST00000515982 C4orf48Q5BLP8 95 aa4.17□□□□□ -1.74
SCARNA6-201ENST00000515982 C9orf153Q5TBE3 101 aa4.17□□□□□ -1.74
SCARNA6-201ENST00000515982 GTF2H5Q6ZYL4 71 aa4.17□□□□□ -1.74
SCARNA6-201ENST00000515982 C9JAW5 83 aa4.16□□□□□ -1.74
SCARNA6-201ENST00000515982 NDUFV3P56181 108 aaKnown RBP4.16□□□□□ -1.74
SCARNA6-201ENST00000515982 MOBPQ13875 183 aa4.16□□□□□ -1.74
SCARNA6-201ENST00000515982 KRTAP13-2Q52LG2 175 aa4.16□□□□□ -1.74
SCARNA6-201ENST00000515982 SPAG11AQ6PDA7 123 aa4.16□□□□□ -1.74
SCARNA6-201ENST00000515982 C3orf22Q8N5N4 141 aa4.16□□□□□ -1.74
SCARNA6-201ENST00000515982 Q8NBF4 154 aa4.16□□□□□ -1.74
SCARNA6-201ENST00000515982 H3BMG7 143 aa4.15□□□□□ -1.75
SCARNA6-201ENST00000515982 Q6JHZ5 121 aa4.15□□□□□ -1.75
SCARNA6-201ENST00000515982 IGLV8-61A0A075B6I0 122 aa4.14□□□□□ -1.75
SCARNA6-201ENST00000515982 K7EP34 96 aa4.14□□□□□ -1.75
SCARNA6-201ENST00000515982 MT1HL1P0DM35 61 aa4.14□□□□□ -1.75
SCARNA6-201ENST00000515982 ANKRD29Q8N6D5 301 aa4.14□□□□□ -1.75
SCARNA6-201ENST00000515982 LINC00304Q8N9R0 145 aa4.14□□□□□ -1.75
SCARNA6-201ENST00000515982 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
SCARNA6-201ENST00000515982 JMJD7-PLA2G4BH0Y9G9 81 aa4.13□□□□□ -1.75
SCARNA6-201ENST00000515982 H3BT86 120 aa4.13□□□□□ -1.75
SCARNA6-201ENST00000515982 SPINK1P00995 79 aa4.12□□□□□ -1.75
SCARNA6-201ENST00000515982 RBM3P98179 157 aaKnown RBP4.12□□□□□ -1.75
SCARNA6-201ENST00000515982 CD164Q04900 197 aa4.12□□□□□ -1.75
SCARNA6-201ENST00000515982 DSCR8Q96T75 97 aa4.11□□□□□ -1.75
SCARNA6-201ENST00000515982 RNF213Q63HN8 5207 aa4.1□□□□□ -1.75
SCARNA6-201ENST00000515982 F8W1H4 67 aa4.1□□□□□ -1.75
SCARNA6-201ENST00000515982 PDE6GP18545 87 aa4.1□□□□□ -1.75
SCARNA6-201ENST00000515982 RPS29P62273 56 aaKnown RBP4.1□□□□□ -1.75
SCARNA6-201ENST00000515982 C21orf62-AS1Q17RA5 79 aa4.1□□□□□ -1.75
SCARNA6-201ENST00000515982 IGFL1Q6UW32 110 aa4.1□□□□□ -1.75
SCARNA6-201ENST00000515982 FAT3Q8TDW7 4589 aa4.09□□□□□ -1.75
SCARNA6-201ENST00000515982 TEN1Q86WV5 123 aa4.09□□□□□ -1.75
SCARNA6-201ENST00000515982 TRBV7-4A0A0J9YYF1 115 aa4.08□□□□□ -1.76
SCARNA6-201ENST00000515982 A0A1B0GV72 72 aa4.08□□□□□ -1.76
SCARNA6-201ENST00000515982 A0A1B0GV90 55 aa4.08□□□□□ -1.76
SCARNA6-201ENST00000515982 LRP2P98164 4655 aa4.08□□□□□ -1.76
SCARNA6-201ENST00000515982 Q6Q795 121 aa4.08□□□□□ -1.76
SCARNA6-201ENST00000515982 HRCT1Q6UXD1 115 aa4.08□□□□□ -1.76
SCARNA6-201ENST00000515982 MTURNQ8N3F0 131 aa4.08□□□□□ -1.76
SCARNA6-201ENST00000515982 OBSCN-AS1Q96MR7 158 aa4.08□□□□□ -1.76
SCARNA6-201ENST00000515982 LIMD2Q9BT23 127 aa4.08□□□□□ -1.76
SCARNA6-201ENST00000515982 PRO0461Q9UI25 63 aa4.08□□□□□ -1.76
SCARNA6-201ENST00000515982 LOC110117498A0A087WWA1 95 aa4.07□□□□□ -1.76
SCARNA6-201ENST00000515982 A0A0G2JQZ4 141 aa4.07□□□□□ -1.76
SCARNA6-201ENST00000515982 TRBV7-7A0A0K0K1E9 115 aa4.07□□□□□ -1.76
SCARNA6-201ENST00000515982 PCP4P48539 62 aa4.07□□□□□ -1.76
SCARNA6-201ENST00000515982 SMCPP49901 116 aaPredicted RBP4.07□□□□□ -1.76
SCARNA6-201ENST00000515982 TNXBP22105 4242 aa4.06□□□□□ -1.76
SCARNA6-201ENST00000515982 A0A1B0GW54 56 aa4.06□□□□□ -1.76
SCARNA6-201ENST00000515982 CCKP06307 115 aa4.06□□□□□ -1.76
SCARNA6-201ENST00000515982 Q5XG85 94 aa4.06□□□□□ -1.76
SCARNA6-201ENST00000515982 SVIPQ8NHG7 77 aa4.06□□□□□ -1.76
SCARNA6-201ENST00000515982 A0A1W2PNM2 257 aa4.05□□□□□ -1.76
SCARNA6-201ENST00000515982 Q6ZQT0 140 aa4.05□□□□□ -1.76
SCARNA6-201ENST00000515982 VPS25Q9BRG1 176 aa4.05□□□□□ -1.76
SCARNA6-201ENST00000515982 C14orf132Q9NPU4 83 aa4.05□□□□□ -1.76
SCARNA6-201ENST00000515982 SS18L2Q9UHA2 77 aa4.05□□□□□ -1.76
SCARNA6-201ENST00000515982 ASB16-AS1Q495Z4 193 aa4.04□□□□□ -1.76
SCARNA6-201ENST00000515982 A0A087WSZ3 146 aa4.03□□□□□ -1.76
SCARNA6-201ENST00000515982 ETDBQ3ZM63 59 aa4.03□□□□□ -1.76
SCARNA6-201ENST00000515982 FP248Q71RG6 208 aaPredicted RBP4.02□□□□□ -1.77
SCARNA6-201ENST00000515982 KRTAP9-2Q9BYQ4 174 aa4.02□□□□□ -1.77
SCARNA6-201ENST00000515982 PRR4Q16378 134 aa4.01□□□□□ -1.77
SCARNA6-201ENST00000515982 C1orf195Q5TG92 126 aa4□□□□□ -1.77
SCARNA6-201ENST00000515982 IGLV7-46A0A075B6I9 117 aa3.99□□□□□ -1.77
SCARNA6-201ENST00000515982 RETNLBQ9BQ08 111 aa3.99□□□□□ -1.77
SCARNA6-201ENST00000515982 KRTAP9-6A0A140TA67 174 aa3.98□□□□□ -1.77
SCARNA6-201ENST00000515982 NREPQ16612 68 aa3.98□□□□□ -1.77
SCARNA6-201ENST00000515982 J3KT08 172 aa3.97□□□□□ -1.77
SCARNA6-201ENST00000515982 ACYP1P07311 99 aa3.97□□□□□ -1.77
SCARNA6-201ENST00000515982 LINC00472Q9H8W2 130 aa3.97□□□□□ -1.77
SCARNA6-201ENST00000515982 IGKV4-1P06312 121 aa3.96□□□□□ -1.78
SCARNA6-201ENST00000515982 J3QR89 54 aa3.95□□□□□ -1.78
SCARNA6-201ENST00000515982 Q96NJ1 140 aa3.95□□□□□ -1.78
SCARNA6-201ENST00000515982 UBL5Q9BZL1 73 aa3.95□□□□□ -1.78
SCARNA6-201ENST00000515982 NDUFB1O75438 58 aa3.94□□□□□ -1.78
SCARNA6-201ENST00000515982 TPRXLQ17RH7 258 aa3.94□□□□□ -1.78
SCARNA6-201ENST00000515982 FAM240AA0A1B0GVK7 77 aa3.93□□□□□ -1.78
SCARNA6-201ENST00000515982 DEFB116Q30KQ4 102 aa3.93□□□□□ -1.78
SCARNA6-201ENST00000515982 Q6ZVQ6 151 aa3.93□□□□□ -1.78
SCARNA6-201ENST00000515982 SIGMAR1Q99720 223 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms