RNA–Protein interactions for RNA: ENST00000515885.5

LINC00461-216, long intergenic non-protein coding RNA 461, humanhuman

TSL 5

Gene LINC00461, Length 719 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-216ENST00000515885 MED9Q9NWA0 146 aa3.61□□□□□ -1.83
LINC00461-216ENST00000515885 HIST3H2BBQ8N257 126 aa3.6□□□□□ -1.83
LINC00461-216ENST00000515885 PLEKHB2Q96CS7 222 aa3.6□□□□□ -1.83
LINC00461-216ENST00000515885 SPANXA1Q9NS26 97 aa3.6□□□□□ -1.83
LINC00461-216ENST00000515885 UMAD1C9J7I0 102 aa3.59□□□□□ -1.83
LINC00461-216ENST00000515885 Q5BKY6 102 aa3.59□□□□□ -1.83
LINC00461-216ENST00000515885 S100ZQ8WXG8 99 aa3.59□□□□□ -1.83
LINC00461-216ENST00000515885 TMEM191AQ9H0A3 160 aa3.59□□□□□ -1.83
LINC00461-216ENST00000515885 OSTCQ9NRP0 149 aa3.59□□□□□ -1.83
LINC00461-216ENST00000515885 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
LINC00461-216ENST00000515885 F8VRH5 84 aa3.58□□□□□ -1.84
LINC00461-216ENST00000515885 TAX1BP3O14907 124 aa3.58□□□□□ -1.84
LINC00461-216ENST00000515885 IFI27P40305 119 aaPredicted RBP3.58□□□□□ -1.84
LINC00461-216ENST00000515885 MRPS36P82909 103 aaKnown RBP3.58□□□□□ -1.84
LINC00461-216ENST00000515885 Q8IZM0 81 aa3.58□□□□□ -1.84
LINC00461-216ENST00000515885 USH2AO75445 5202 aa3.58□□□□□ -1.84
LINC00461-216ENST00000515885 FCGBPQ9Y6R7 5405 aaPredicted RBP3.58□□□□□ -1.84
LINC00461-216ENST00000515885 TRBV10-2A0A0K0K1G8 114 aa3.57□□□□□ -1.84
LINC00461-216ENST00000515885 A0A1B0GUT8 65 aa3.57□□□□□ -1.84
LINC00461-216ENST00000515885 ARPC5O15511 151 aa3.57□□□□□ -1.84
LINC00461-216ENST00000515885 SPRR4Q96PI1 79 aa3.57□□□□□ -1.84
LINC00461-216ENST00000515885 C2orf88Q9BSF0 95 aa3.57□□□□□ -1.84
LINC00461-216ENST00000515885 TMEM126AQ9H061 195 aa3.57□□□□□ -1.84
LINC00461-216ENST00000515885 PRO2289Q9P1D8 64 aa3.57□□□□□ -1.84
LINC00461-216ENST00000515885 C9orf92A6NGG3 77 aa3.56□□□□□ -1.84
LINC00461-216ENST00000515885 TMEM141Q96I45 108 aa3.56□□□□□ -1.84
LINC00461-216ENST00000515885 TSTD3H0UI37 97 aa3.55□□□□□ -1.84
LINC00461-216ENST00000515885 M0R378 163 aa3.55□□□□□ -1.84
LINC00461-216ENST00000515885 HINT1P49773 126 aaPredicted RBP3.55□□□□□ -1.84
LINC00461-216ENST00000515885 HIGD1CA8MV81 97 aa3.54□□□□□ -1.84
LINC00461-216ENST00000515885 CKS2P33552 79 aa3.54□□□□□ -1.84
LINC00461-216ENST00000515885 FXYD2P54710 66 aa3.54□□□□□ -1.84
LINC00461-216ENST00000515885 RPS29P62273 56 aaKnown RBP3.54□□□□□ -1.84
LINC00461-216ENST00000515885 C20orf78Q9BR46 151 aa3.54□□□□□ -1.84
LINC00461-216ENST00000515885 LINC00846Q9NV44 126 aa3.54□□□□□ -1.84
LINC00461-216ENST00000515885 SMIM2Q9BVW6 85 aa3.53□□□□□ -1.84
LINC00461-216ENST00000515885 KANTRA0A1W2PQU2 76 aa3.52□□□□□ -1.85
LINC00461-216ENST00000515885 LINC00299Q6ZSB3 139 aa3.52□□□□□ -1.85
LINC00461-216ENST00000515885 HIST1H2BLQ99880 126 aa3.52□□□□□ -1.85
LINC00461-216ENST00000515885 BATF3Q9NR55 127 aa3.52□□□□□ -1.85
LINC00461-216ENST00000515885 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
LINC00461-216ENST00000515885 LGALS3P17931 250 aaKnown RBP3.51□□□□□ -1.85
LINC00461-216ENST00000515885 TMEM258P61165 79 aa3.51□□□□□ -1.85
LINC00461-216ENST00000515885 SEC11AP67812 179 aa3.51□□□□□ -1.85
LINC00461-216ENST00000515885 SSBP3-AS1Q7Z2R9 100 aa3.51□□□□□ -1.85
LINC00461-216ENST00000515885 COX7B2Q8TF08 81 aa3.51□□□□□ -1.85
LINC00461-216ENST00000515885 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
LINC00461-216ENST00000515885 CDKN2A-AS1Q9UH64 79 aa3.51□□□□□ -1.85
LINC00461-216ENST00000515885 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
LINC00461-216ENST00000515885 A0A0G2JQZ4 141 aa3.5□□□□□ -1.85
LINC00461-216ENST00000515885 TMEM256-PLSCR3K7ERE1 68 aa3.5□□□□□ -1.85
LINC00461-216ENST00000515885 TCL1BO95988 128 aa3.5□□□□□ -1.85
LINC00461-216ENST00000515885 C9orf153Q5TBE3 101 aa3.5□□□□□ -1.85
LINC00461-216ENST00000515885 FLGP20930 4061 aaPredicted RBP3.49□□□□□ -1.85
LINC00461-216ENST00000515885 HMSDA8MTL9 139 aa3.49□□□□□ -1.85
LINC00461-216ENST00000515885 D6R8Y8 96 aa3.49□□□□□ -1.85
LINC00461-216ENST00000515885 TRGC2P03986 189 aa3.48□□□□□ -1.85
LINC00461-216ENST00000515885 Q6ZQT0 140 aa3.48□□□□□ -1.85
LINC00461-216ENST00000515885 ETDCA0A1B0GVM5 59 aa3.47□□□□□ -1.85
LINC00461-216ENST00000515885 F8W036 122 aa3.47□□□□□ -1.85
LINC00461-216ENST00000515885 J3QQQ9 107 aa3.47□□□□□ -1.85
LINC00461-216ENST00000515885 ZNF345Q14585 488 aa3.47□□□□□ -1.85
LINC00461-216ENST00000515885 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
LINC00461-216ENST00000515885 AMELXQ99217 191 aa3.47□□□□□ -1.85
LINC00461-216ENST00000515885 LIMD2Q9BT23 127 aa3.47□□□□□ -1.85
LINC00461-216ENST00000515885 NAT8BQ9UHF3 227 aa3.47□□□□□ -1.85
LINC00461-216ENST00000515885 NDUFA5Q16718 116 aa3.46□□□□□ -1.86
LINC00461-216ENST00000515885 KRTAP6-3Q3LI67 103 aa3.46□□□□□ -1.86
LINC00461-216ENST00000515885 HRCT1Q6UXD1 115 aa3.46□□□□□ -1.86
LINC00461-216ENST00000515885 S100A8P05109 93 aa3.45□□□□□ -1.86
LINC00461-216ENST00000515885 SPINK8P0C7L1 97 aa3.45□□□□□ -1.86
LINC00461-216ENST00000515885 PRELID3AQ96N28 172 aa3.45□□□□□ -1.86
LINC00461-216ENST00000515885 SMIM7Q9BQ49 75 aa3.45□□□□□ -1.86
LINC00461-216ENST00000515885 RPL37P61927 97 aaKnown RBP3.44□□□□□ -1.86
LINC00461-216ENST00000515885 S100A12P80511 92 aa3.44□□□□□ -1.86
LINC00461-216ENST00000515885 MRPL54Q6P161 138 aaKnown RBP3.44□□□□□ -1.86
LINC00461-216ENST00000515885 V9GYV3 84 aa3.44□□□□□ -1.86
LINC00461-216ENST00000515885 SOSTDC1Q6X4U4 206 aa3.43□□□□□ -1.86
LINC00461-216ENST00000515885 ZNF625Q96I27 306 aaPredicted RBP3.43□□□□□ -1.86
LINC00461-216ENST00000515885 LAMTOR3Q9UHA4 124 aa3.43□□□□□ -1.86
LINC00461-216ENST00000515885 ERG28Q9UKR5 140 aa3.43□□□□□ -1.86
LINC00461-216ENST00000515885 KRTAP10-10P60014 251 aa3.42□□□□□ -1.86
LINC00461-216ENST00000515885 COX17Q14061 63 aa3.42□□□□□ -1.86
LINC00461-216ENST00000515885 C20orf202A1L168 122 aa3.41□□□□□ -1.86
LINC00461-216ENST00000515885 IGIPA6NJ69 53 aa3.41□□□□□ -1.86
LINC00461-216ENST00000515885 H3BRM9 83 aa3.41□□□□□ -1.86
LINC00461-216ENST00000515885 NCR3O14931 201 aa3.41□□□□□ -1.86
LINC00461-216ENST00000515885 IGKV4-1P06312 121 aa3.41□□□□□ -1.86
LINC00461-216ENST00000515885 SCGB1A1P11684 91 aa3.41□□□□□ -1.86
LINC00461-216ENST00000515885 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
LINC00461-216ENST00000515885 PRR15Q8IV56 129 aa3.41□□□□□ -1.86
LINC00461-216ENST00000515885 Q8N8P6 123 aa3.41□□□□□ -1.86
LINC00461-216ENST00000515885 SMIM27A0A1W2PRY6 76 aa3.4□□□□□ -1.87
LINC00461-216ENST00000515885 ERC2-IT1O76042 136 aa3.4□□□□□ -1.87
LINC00461-216ENST00000515885 LINC00158P58513 81 aa3.4□□□□□ -1.87
LINC00461-216ENST00000515885 MT2AP02795 61 aa3.39□□□□□ -1.87
LINC00461-216ENST00000515885 SPRR1AP35321 89 aa3.39□□□□□ -1.87
LINC00461-216ENST00000515885 ADIRFQ15847 76 aa3.39□□□□□ -1.87
LINC00461-216ENST00000515885 ATP11AUNQ6ZP68 121 aa3.39□□□□□ -1.87
LINC00461-216ENST00000515885 KCNQ1DNQ9H478 68 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms