RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 LINC01549A6NIU2 74 aa5.79□□□□□ -1.48
SMAD1-216ENST00000515527 HERV-K104P63124 156 aa5.78□□□□□ -1.48
SMAD1-216ENST00000515527 MIEN1Q9BRT3 115 aa5.78□□□□□ -1.48
SMAD1-216ENST00000515527 FAM236AA0A1B0GUQ0 79 aa5.77□□□□□ -1.49
SMAD1-216ENST00000515527 FAM236BA0A1B0GV22 79 aa5.77□□□□□ -1.49
SMAD1-216ENST00000515527 C11orf86A6NJI1 115 aa5.77□□□□□ -1.49
SMAD1-216ENST00000515527 ADIRFQ15847 76 aa5.77□□□□□ -1.49
SMAD1-216ENST00000515527 PET117Q6UWS5 81 aa5.77□□□□□ -1.49
SMAD1-216ENST00000515527 ATP5L2Q7Z4Y8 100 aa5.76□□□□□ -1.49
SMAD1-216ENST00000515527 SPRR2GQ9BYE4 73 aa5.76□□□□□ -1.49
SMAD1-216ENST00000515527 NDUFC2O95298 119 aa5.75□□□□□ -1.49
SMAD1-216ENST00000515527 COX7BP24311 80 aa5.75□□□□□ -1.49
SMAD1-216ENST00000515527 A0A1B0GV72 72 aa5.74□□□□□ -1.49
SMAD1-216ENST00000515527 S100A2P29034 98 aa5.74□□□□□ -1.49
SMAD1-216ENST00000515527 UQCC3Q6UW78 93 aa5.74□□□□□ -1.49
SMAD1-216ENST00000515527 SVBPQ8N300 66 aa5.74□□□□□ -1.49
SMAD1-216ENST00000515527 SCGB1A1P11684 91 aa5.73□□□□□ -1.49
SMAD1-216ENST00000515527 ELOF1P60002 83 aaKnown RBP5.73□□□□□ -1.49
SMAD1-216ENST00000515527 IGLV5-48A0A075B6I7 105 aa5.72□□□□□ -1.49
SMAD1-216ENST00000515527 F8WEM9 126 aa5.72□□□□□ -1.49
SMAD1-216ENST00000515527 H3BS24 57 aa5.72□□□□□ -1.49
SMAD1-216ENST00000515527 M0R143 59 aa5.72□□□□□ -1.49
SMAD1-216ENST00000515527 SNRPEP62304 92 aaKnown RBP5.72□□□□□ -1.49
SMAD1-216ENST00000515527 APOC3P02656 99 aa5.71□□□□□ -1.5
SMAD1-216ENST00000515527 A0A1B0GWB2 263 aa5.7□□□□□ -1.5
SMAD1-216ENST00000515527 TMEM218A2RU14 115 aa5.7□□□□□ -1.5
SMAD1-216ENST00000515527 SPINK7P58062 85 aa5.7□□□□□ -1.5
SMAD1-216ENST00000515527 WFDC13Q8IUB5 93 aa5.7□□□□□ -1.5
SMAD1-216ENST00000515527 OR13C6PQ8NH95 151 aa5.7□□□□□ -1.5
SMAD1-216ENST00000515527 CLEC2BQ92478 149 aa5.69□□□□□ -1.5
SMAD1-216ENST00000515527 MYMXA0A1B0GTQ4 84 aa5.68□□□□□ -1.5
SMAD1-216ENST00000515527 TMEM223A0PJW6 202 aa5.68□□□□□ -1.5
SMAD1-216ENST00000515527 A4D1N5 150 aa5.68□□□□□ -1.5
SMAD1-216ENST00000515527 FABP9Q0Z7S8 132 aa5.68□□□□□ -1.5
SMAD1-216ENST00000515527 VPS25Q9BRG1 176 aa5.68□□□□□ -1.5
SMAD1-216ENST00000515527 SCGB1D1O95968 90 aa5.67□□□□□ -1.5
SMAD1-216ENST00000515527 RHEBQ15382 184 aa5.67□□□□□ -1.5
SMAD1-216ENST00000515527 HBDP02042 147 aa5.66□□□□□ -1.5
SMAD1-216ENST00000515527 MT-ND4LP03901 98 aa5.66□□□□□ -1.5
SMAD1-216ENST00000515527 SRP19P09132 144 aaKnown RBP5.66□□□□□ -1.5
SMAD1-216ENST00000515527 MT4P47944 62 aa5.66□□□□□ -1.5
SMAD1-216ENST00000515527 LINC00313P59037 77 aa5.66□□□□□ -1.5
SMAD1-216ENST00000515527 PEA15Q15121 130 aa5.66□□□□□ -1.5
SMAD1-216ENST00000515527 Q6JHZ5 121 aa5.66□□□□□ -1.5
SMAD1-216ENST00000515527 SMCO4Q9NRQ5 59 aa5.66□□□□□ -1.5
SMAD1-216ENST00000515527 NPC2P61916 151 aa5.65□□□□□ -1.5
SMAD1-216ENST00000515527 BAGE3Q86Y29 109 aa5.65□□□□□ -1.5
SMAD1-216ENST00000515527 K7ERU9 68 aa5.64□□□□□ -1.51
SMAD1-216ENST00000515527 SOSTDC1Q6X4U4 206 aa5.64□□□□□ -1.51
SMAD1-216ENST00000515527 ANAPC16Q96DE5 110 aa5.64□□□□□ -1.51
SMAD1-216ENST00000515527 NAT8Q9UHE5 227 aa5.64□□□□□ -1.51
SMAD1-216ENST00000515527 COLCA2A8K830 154 aa5.63□□□□□ -1.51
SMAD1-216ENST00000515527 ZNF815PA8K554 130 aa5.62□□□□□ -1.51
SMAD1-216ENST00000515527 H1FX-AS1Q4G0G2 97 aa5.62□□□□□ -1.51
SMAD1-216ENST00000515527 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
SMAD1-216ENST00000515527 PYY3Q5JQD4 70 aa5.61□□□□□ -1.51
SMAD1-216ENST00000515527 COL5A1-AS1Q5SY13 56 aa5.61□□□□□ -1.51
SMAD1-216ENST00000515527 KRTAP4-12Q9BQ66 201 aa5.61□□□□□ -1.51
SMAD1-216ENST00000515527 SS18L2Q9UHA2 77 aa5.61□□□□□ -1.51
SMAD1-216ENST00000515527 LINC01546A6NGU7 62 aa5.6□□□□□ -1.51
SMAD1-216ENST00000515527 SEC11CQ9BY50 192 aa5.6□□□□□ -1.51
SMAD1-216ENST00000515527 UBE2V1Q13404 147 aa5.58□□□□□ -1.52
SMAD1-216ENST00000515527 SIGMAR1Q99720 223 aa5.58□□□□□ -1.52
SMAD1-216ENST00000515527 SNHG12Q9BXW3 62 aa5.58□□□□□ -1.52
SMAD1-216ENST00000515527 COX19Q49B96 90 aa5.57□□□□□ -1.52
SMAD1-216ENST00000515527 RPS10P5Q9NQ39 176 aa5.57□□□□□ -1.52
SMAD1-216ENST00000515527 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
SMAD1-216ENST00000515527 A0A0J9YXY3 114 aa5.56□□□□□ -1.52
SMAD1-216ENST00000515527 C5orf47Q569G3 176 aa5.56□□□□□ -1.52
SMAD1-216ENST00000515527 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
SMAD1-216ENST00000515527 TRAV13-2A0A0B4J235 113 aa5.55□□□□□ -1.52
SMAD1-216ENST00000515527 OCIAD2Q56VL3 154 aa5.55□□□□□ -1.52
SMAD1-216ENST00000515527 NMUP48645 174 aa5.54□□□□□ -1.52
SMAD1-216ENST00000515527 ZCCHC13Q8WW36 166 aaKnown RBP5.54□□□□□ -1.52
SMAD1-216ENST00000515527 SPANXDQ9BXN6 97 aa5.54□□□□□ -1.52
SMAD1-216ENST00000515527 TRBV7-6A0A0J9YX20 115 aa5.53□□□□□ -1.52
SMAD1-216ENST00000515527 VAMP3Q15836 100 aa5.53□□□□□ -1.52
SMAD1-216ENST00000515527 TSPEAR-AS2P59090 65 aa5.52□□□□□ -1.53
SMAD1-216ENST00000515527 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
SMAD1-216ENST00000515527 A0A096LNJ9 63 aa5.51□□□□□ -1.53
SMAD1-216ENST00000515527 SPANXCQ9NY87 97 aa5.5□□□□□ -1.53
SMAD1-216ENST00000515527 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
SMAD1-216ENST00000515527 HIST3H2BBQ8N257 126 aa5.49□□□□□ -1.53
SMAD1-216ENST00000515527 NHP2Q9NX24 153 aaKnown RBP5.49□□□□□ -1.53
SMAD1-216ENST00000515527 ADAMTSL4-AS1Q5T5F5 129 aa5.47□□□□□ -1.53
SMAD1-216ENST00000515527 MT1XP80297 61 aa5.46□□□□□ -1.54
SMAD1-216ENST00000515527 RBM3P98179 157 aaKnown RBP5.46□□□□□ -1.54
SMAD1-216ENST00000515527 PMCHL1Q16048 86 aa5.46□□□□□ -1.54
SMAD1-216ENST00000515527 C9JQL5 133 aa5.45□□□□□ -1.54
SMAD1-216ENST00000515527 FABP4P15090 132 aa5.45□□□□□ -1.54
SMAD1-216ENST00000515527 A0A087WSZ3 146 aa5.44□□□□□ -1.54
SMAD1-216ENST00000515527 LEPROTO15243 131 aa5.44□□□□□ -1.54
SMAD1-216ENST00000515527 J3QR89 54 aa5.43□□□□□ -1.54
SMAD1-216ENST00000515527 HIST1H2BLQ99880 126 aa5.43□□□□□ -1.54
SMAD1-216ENST00000515527 H3BUT2 72 aa5.42□□□□□ -1.54
SMAD1-216ENST00000515527 J3QQQ9 107 aa5.42□□□□□ -1.54
SMAD1-216ENST00000515527 IGKV4-1P06312 121 aa5.42□□□□□ -1.54
SMAD1-216ENST00000515527 KLKP1Q107X0 134 aa5.42□□□□□ -1.54
SMAD1-216ENST00000515527 COA6Q5JTJ3 125 aaKnown RBP5.42□□□□□ -1.54
SMAD1-216ENST00000515527 LINC00308Q8TCZ7 52 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms