RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TMA7Q9Y2S6 64 aaKnown RBP6.34□□□□□ -1.39
VCAN-212ENST00000515397 KRTAP9-6A0A140TA67 174 aa6.33□□□□□ -1.4
VCAN-212ENST00000515397 FAT4Q6V0I7 4981 aa6.32□□□□□ -1.4
VCAN-212ENST00000515397 XP32Q5T750 250 aa6.32□□□□□ -1.4
VCAN-212ENST00000515397 RAB37Q96AX2 223 aa6.32□□□□□ -1.4
VCAN-212ENST00000515397 HIGD1BQ9P298 99 aa6.32□□□□□ -1.4
VCAN-212ENST00000515397 CD164Q04900 197 aa6.31□□□□□ -1.4
VCAN-212ENST00000515397 ASB16-AS1Q495Z4 193 aa6.31□□□□□ -1.4
VCAN-212ENST00000515397 PYY3Q5JQD4 70 aa6.31□□□□□ -1.4
VCAN-212ENST00000515397 C1orf195Q5TG92 126 aa6.31□□□□□ -1.4
VCAN-212ENST00000515397 A0A0U1RQV1 116 aa6.3□□□□□ -1.4
VCAN-212ENST00000515397 F8WEM9 126 aa6.3□□□□□ -1.4
VCAN-212ENST00000515397 FXYD2P54710 66 aa6.29□□□□□ -1.4
VCAN-212ENST00000515397 BVES-AS1Q5T3Y7 98 aa6.29□□□□□ -1.4
VCAN-212ENST00000515397 CEND1Q8N111 149 aa6.29□□□□□ -1.4
VCAN-212ENST00000515397 FAM218AQ96MZ4 157 aa6.29□□□□□ -1.4
VCAN-212ENST00000515397 H3BUT2 72 aa6.28□□□□□ -1.4
VCAN-212ENST00000515397 SEC61BP60468 96 aaKnown RBP6.28□□□□□ -1.4
VCAN-212ENST00000515397 OCIAD2Q56VL3 154 aa6.28□□□□□ -1.4
VCAN-212ENST00000515397 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.28□□□□□ -1.4
VCAN-212ENST00000515397 SNHG12Q9BXW3 62 aa6.28□□□□□ -1.4
VCAN-212ENST00000515397 A0A0B4J2C4 111 aa6.27□□□□□ -1.41
VCAN-212ENST00000515397 IGFL1Q6UW32 110 aa6.27□□□□□ -1.41
VCAN-212ENST00000515397 Q5XG85 94 aa6.26□□□□□ -1.41
VCAN-212ENST00000515397 PCOTHQ58A44 107 aa6.25□□□□□ -1.41
VCAN-212ENST00000515397 PRO1854Q9UHT4 67 aa6.25□□□□□ -1.41
VCAN-212ENST00000515397 IGLV8-61A0A075B6I0 122 aa6.24□□□□□ -1.41
VCAN-212ENST00000515397 K7ERJ3 54 aa6.24□□□□□ -1.41
VCAN-212ENST00000515397 LCE2BO14633 110 aa6.24□□□□□ -1.41
VCAN-212ENST00000515397 LCE2AQ5TA79 106 aaPredicted RBP6.24□□□□□ -1.41
VCAN-212ENST00000515397 H0YGX0 51 aa6.23□□□□□ -1.41
VCAN-212ENST00000515397 TCL1BO95988 128 aa6.23□□□□□ -1.41
VCAN-212ENST00000515397 Q6JHZ5 121 aa6.23□□□□□ -1.41
VCAN-212ENST00000515397 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
VCAN-212ENST00000515397 TRBV7-7A0A0K0K1E9 115 aa6.22□□□□□ -1.41
VCAN-212ENST00000515397 TRIAP1O43715 76 aa6.22□□□□□ -1.41
VCAN-212ENST00000515397 TMEM238LA0A1B0GVL6 79 aa6.21□□□□□ -1.42
VCAN-212ENST00000515397 A6NJY4 79 aa6.21□□□□□ -1.42
VCAN-212ENST00000515397 FABP2P12104 132 aa6.21□□□□□ -1.42
VCAN-212ENST00000515397 NDUFV3P56181 108 aaKnown RBP6.2□□□□□ -1.42
VCAN-212ENST00000515397 HSD52Q0P140 79 aa6.2□□□□□ -1.42
VCAN-212ENST00000515397 PPDPFLQ8WWR9 84 aa6.2□□□□□ -1.42
VCAN-212ENST00000515397 A0A1B0GV72 72 aa6.19□□□□□ -1.42
VCAN-212ENST00000515397 SNCGO76070 127 aa6.19□□□□□ -1.42
VCAN-212ENST00000515397 PSMB2P49721 201 aa6.18□□□□□ -1.42
VCAN-212ENST00000515397 H3BMG7 143 aa6.17□□□□□ -1.42
VCAN-212ENST00000515397 UQCR10Q9UDW1 63 aa6.17□□□□□ -1.42
VCAN-212ENST00000515397 OBSCN-AS1Q96MR7 158 aa6.15□□□□□ -1.42
VCAN-212ENST00000515397 A0A1B0GX51 115 aa6.14□□□□□ -1.43
VCAN-212ENST00000515397 LST1O00453 97 aa6.14□□□□□ -1.43
VCAN-212ENST00000515397 A0A087WSZ3 146 aa6.13□□□□□ -1.43
VCAN-212ENST00000515397 RPL37P61927 97 aaKnown RBP6.13□□□□□ -1.43
VCAN-212ENST00000515397 LCE2CQ5TA81 110 aa6.13□□□□□ -1.43
VCAN-212ENST00000515397 A0A1W2PNM2 257 aa6.12□□□□□ -1.43
VCAN-212ENST00000515397 KRTAP19-2Q3LHN2 52 aa6.12□□□□□ -1.43
VCAN-212ENST00000515397 TEN1Q86WV5 123 aa6.12□□□□□ -1.43
VCAN-212ENST00000515397 DNAL4O96015 105 aa6.11□□□□□ -1.43
VCAN-212ENST00000515397 COX6CP09669 75 aa6.1□□□□□ -1.43
VCAN-212ENST00000515397 SCGB1C2P0DMR2 95 aa6.1□□□□□ -1.43
VCAN-212ENST00000515397 SMCPP49901 116 aaPredicted RBP6.1□□□□□ -1.43
VCAN-212ENST00000515397 Q6Q795 121 aa6.1□□□□□ -1.43
VCAN-212ENST00000515397 ORMDL1Q9P0S3 153 aa6.1□□□□□ -1.43
VCAN-212ENST00000515397 ANKRD29Q8N6D5 301 aa6.09□□□□□ -1.43
VCAN-212ENST00000515397 Q96NJ1 140 aa6.09□□□□□ -1.43
VCAN-212ENST00000515397 NAA38Q9BRA0 125 aaKnown RBP6.09□□□□□ -1.43
VCAN-212ENST00000515397 GHRHP01286 108 aa6.08□□□□□ -1.44
VCAN-212ENST00000515397 DEFB116Q30KQ4 102 aa6.07□□□□□ -1.44
VCAN-212ENST00000515397 SS18L2Q9UHA2 77 aa6.07□□□□□ -1.44
VCAN-212ENST00000515397 TMEM256-PLSCR3K7ERE1 68 aa6.06□□□□□ -1.44
VCAN-212ENST00000515397 DSCR10P59022 87 aa6.05□□□□□ -1.44
VCAN-212ENST00000515397 MT1HP80294 61 aa6.04□□□□□ -1.44
VCAN-212ENST00000515397 TRACP01848 142 aa6.03□□□□□ -1.44
VCAN-212ENST00000515397 CCKP06307 115 aa6.03□□□□□ -1.44
VCAN-212ENST00000515397 ATP11AUNQ6ZP68 121 aa6.03□□□□□ -1.44
VCAN-212ENST00000515397 SIGMAR1Q99720 223 aa6.03□□□□□ -1.44
VCAN-212ENST00000515397 VPS25Q9BRG1 176 aa6.03□□□□□ -1.44
VCAN-212ENST00000515397 TRBV7-4A0A0J9YYF1 115 aa6.02□□□□□ -1.45
VCAN-212ENST00000515397 IGKV4-1P06312 121 aa6.02□□□□□ -1.45
VCAN-212ENST00000515397 BAALC-AS2P0C853 105 aa6.02□□□□□ -1.45
VCAN-212ENST00000515397 UBE2V1Q13404 147 aa6.02□□□□□ -1.45
VCAN-212ENST00000515397 Q75L30 129 aa6.02□□□□□ -1.45
VCAN-212ENST00000515397 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
VCAN-212ENST00000515397 H3BQ85 93 aa6.01□□□□□ -1.45
VCAN-212ENST00000515397 NOTCH2NLQ7Z3S9 236 aa6.01□□□□□ -1.45
VCAN-212ENST00000515397 KRTAP4-6Q9BYQ5 205 aa6.01□□□□□ -1.45
VCAN-212ENST00000515397 COX6B2Q6YFQ2 88 aa6□□□□□ -1.45
VCAN-212ENST00000515397 CRCT1Q9UGL9 99 aa6□□□□□ -1.45
VCAN-212ENST00000515397 M0R143 59 aa5.99□□□□□ -1.45
VCAN-212ENST00000515397 RBM3P98179 157 aaKnown RBP5.99□□□□□ -1.45
VCAN-212ENST00000515397 A8MUU9 505 aa5.98□□□□□ -1.45
VCAN-212ENST00000515397 SMIM6P0DI80 62 aa5.98□□□□□ -1.45
VCAN-212ENST00000515397 BATFQ16520 125 aa5.98□□□□□ -1.45
VCAN-212ENST00000515397 C20orf166-AS1Q96NR2 134 aa5.98□□□□□ -1.45
VCAN-212ENST00000515397 LINC00472Q9H8W2 130 aa5.98□□□□□ -1.45
VCAN-212ENST00000515397 LINC00313P59037 77 aa5.97□□□□□ -1.45
VCAN-212ENST00000515397 DSCR8Q96T75 97 aa5.97□□□□□ -1.45
VCAN-212ENST00000515397 IGHV6-1A0A0B4J1U7 121 aa5.95□□□□□ -1.46
VCAN-212ENST00000515397 M0R2T5 61 aa5.95□□□□□ -1.46
VCAN-212ENST00000515397 ATXN8Q156A1 80 aa5.95□□□□□ -1.46
VCAN-212ENST00000515397 LOC105371267A0A1B0GV96 52 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms