RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 C4BP0C0L5 1744 aa-0.77□□□□□ -2.53
HMGCS1-207ENST00000514610 USP32Q8NFA0 1604 aa-0.77□□□□□ -2.53
HMGCS1-207ENST00000514610 NWD1Q149M9 1564 aa-0.78□□□□□ -2.53
HMGCS1-207ENST00000514610 CCDC88BA6NC98 1476 aa-0.78□□□□□ -2.53
HMGCS1-207ENST00000514610 ANKRD50Q9ULJ7 1429 aa-0.78□□□□□ -2.53
HMGCS1-207ENST00000514610 ACYP1P07311 99 aa-0.78□□□□□ -2.53
HMGCS1-207ENST00000514610 LINC00158P58513 81 aa-0.78□□□□□ -2.53
HMGCS1-207ENST00000514610 WFDC9Q8NEX5 89 aa-0.78□□□□□ -2.53
HMGCS1-207ENST00000514610 DEPDC5O75140 1603 aa-0.78□□□□□ -2.54
HMGCS1-207ENST00000514610 ABCC3O15438 1527 aa-0.79□□□□□ -2.54
HMGCS1-207ENST00000514610 URB2Q14146 1524 aaKnown RBP-0.79□□□□□ -2.54
HMGCS1-207ENST00000514610 DNAH8Q96JB1 4490 aa-0.79□□□□□ -2.54
HMGCS1-207ENST00000514610 PVALEFA0A1B0GWK0 134 aa-0.79□□□□□ -2.54
HMGCS1-207ENST00000514610 CEBPZOSA8MTT3 80 aa-0.79□□□□□ -2.54
HMGCS1-207ENST00000514610 LYNX1G3V0Z9 82 aa-0.79□□□□□ -2.54
HMGCS1-207ENST00000514610 HMGA1P17096 107 aaKnown RBP-0.79□□□□□ -2.54
HMGCS1-207ENST00000514610 V9GYS6 101 aa-0.79□□□□□ -2.54
HMGCS1-207ENST00000514610 SUPT6HQ7KZ85 1726 aaKnown RBP-0.79□□□□□ -2.54
HMGCS1-207ENST00000514610 SACSQ9NZJ4 4579 aa-0.79□□□□□ -2.54
HMGCS1-207ENST00000514610 BIRC6Q9NR09 4857 aa-0.79□□□□□ -2.54
HMGCS1-207ENST00000514610 MAP3K1Q13233 1512 aa-0.79□□□□□ -2.54
HMGCS1-207ENST00000514610 MYO18BQ8IUG5 2567 aa-0.8□□□□□ -2.54
HMGCS1-207ENST00000514610 POLR1AO95602 1720 aaPredicted RBP-0.8□□□□□ -2.54
HMGCS1-207ENST00000514610 K7EP34 96 aa-0.8□□□□□ -2.54
HMGCS1-207ENST00000514610 PRLHP81277 87 aa-0.8□□□□□ -2.54
HMGCS1-207ENST00000514610 MAGI3Q5TCQ9 1506 aa-0.8□□□□□ -2.54
HMGCS1-207ENST00000514610 DSPP15924 2871 aaKnown RBP-0.8□□□□□ -2.54
HMGCS1-207ENST00000514610 UBR1Q8IWV7 1749 aa-0.81□□□□□ -2.54
HMGCS1-207ENST00000514610 USP9YO00507 2555 aaPredicted RBP-0.81□□□□□ -2.54
HMGCS1-207ENST00000514610 NESP48681 1621 aa-0.81□□□□□ -2.54
HMGCS1-207ENST00000514610 S100A16Q96FQ6 103 aaKnown RBP-0.81□□□□□ -2.54
HMGCS1-207ENST00000514610 NCOA2Q15596 1464 aa-0.81□□□□□ -2.54
HMGCS1-207ENST00000514610 DIP2BQ9P265 1576 aa-0.82□□□□□ -2.54
HMGCS1-207ENST00000514610 KALRNO60229 2985 aa-0.82□□□□□ -2.54
HMGCS1-207ENST00000514610 H0YAA0 97 aa-0.82□□□□□ -2.54
HMGCS1-207ENST00000514610 Q9H521 79 aa-0.82□□□□□ -2.54
HMGCS1-207ENST00000514610 TMEM131LA2VDJ0 1609 aa-0.82□□□□□ -2.54
HMGCS1-207ENST00000514610 MTORP42345 2549 aa-0.83□□□□□ -2.54
HMGCS1-207ENST00000514610 NBEAQ8NFP9 2946 aa-0.83□□□□□ -2.54
HMGCS1-207ENST00000514610 PLECQ15149 4684 aaKnown RBP-0.83□□□□□ -2.54
HMGCS1-207ENST00000514610 IFI27P40305 119 aaPredicted RBP-0.83□□□□□ -2.54
HMGCS1-207ENST00000514610 LTN1O94822 1766 aa-0.83□□□□□ -2.54
HMGCS1-207ENST00000514610 USP9XQ93008 2570 aaPredicted RBP-0.84□□□□□ -2.54
HMGCS1-207ENST00000514610 UMAD1C9J7I0 102 aa-0.84□□□□□ -2.54
HMGCS1-207ENST00000514610 IFI6P09912 130 aa-0.84□□□□□ -2.54
HMGCS1-207ENST00000514610 RGPD4Q7Z3J3 1758 aa-0.84□□□□□ -2.54
HMGCS1-207ENST00000514610 GCN1Q92616 2671 aaKnown RBP-0.84□□□□□ -2.54
HMGCS1-207ENST00000514610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.84□□□□□ -2.54
HMGCS1-207ENST00000514610 MAP3K4Q9Y6R4 1608 aa-0.85□□□□□ -2.55
HMGCS1-207ENST00000514610 LAMA2P24043 3122 aaKnown RBP-0.85□□□□□ -2.55
HMGCS1-207ENST00000514610 KANTRA0A1W2PQU2 76 aa-0.85□□□□□ -2.55
HMGCS1-207ENST00000514610 UTP20O75691 2785 aaKnown RBP-0.85□□□□□ -2.55
HMGCS1-207ENST00000514610 TTC37Q6PGP7 1564 aa-0.85□□□□□ -2.55
HMGCS1-207ENST00000514610 DOT1LQ8TEK3 1739 aa-0.85□□□□□ -2.55
HMGCS1-207ENST00000514610 MGAM2Q2M2H8 2515 aa-0.85□□□□□ -2.55
HMGCS1-207ENST00000514610 RGPD3A6NKT7 1758 aaPredicted RBP-0.85□□□□□ -2.55
HMGCS1-207ENST00000514610 KRTAP20-1Q3LI63 56 aa-0.86□□□□□ -2.55
HMGCS1-207ENST00000514610 ATP5EP2Q5VTU8 51 aa-0.86□□□□□ -2.55
HMGCS1-207ENST00000514610 S4R3F8 94 aa-0.86□□□□□ -2.55
HMGCS1-207ENST00000514610 RIF1Q5UIP0 2472 aaKnown RBP-0.86□□□□□ -2.55
HMGCS1-207ENST00000514610 WDR87Q6ZQQ6 2873 aa-0.86□□□□□ -2.55
HMGCS1-207ENST00000514610 KIF14Q15058 1648 aa-0.86□□□□□ -2.55
HMGCS1-207ENST00000514610 THOC2Q8NI27 1593 aaKnown RBP-0.87□□□□□ -2.55
HMGCS1-207ENST00000514610 MT1HP80294 61 aa-0.87□□□□□ -2.55
HMGCS1-207ENST00000514610 NBEAL2Q6ZNJ1 2754 aa-0.88□□□□□ -2.55
HMGCS1-207ENST00000514610 DEFB131BA0A096LNP1 70 aa-0.88□□□□□ -2.55
HMGCS1-207ENST00000514610 NDUFA4O00483 81 aa-0.88□□□□□ -2.55
HMGCS1-207ENST00000514610 DEFB130BP0DP73 79 aa-0.88□□□□□ -2.55
HMGCS1-207ENST00000514610 DEFB130AP0DP74 79 aa-0.88□□□□□ -2.55
HMGCS1-207ENST00000514610 IAPPP10997 89 aa-0.88□□□□□ -2.55
HMGCS1-207ENST00000514610 DEFB121Q5J5C9 76 aa-0.88□□□□□ -2.55
HMGCS1-207ENST00000514610 DNAH7Q8WXX0 4024 aa-0.88□□□□□ -2.55
HMGCS1-207ENST00000514610 SCN11AQ9UI33 1791 aa-0.88□□□□□ -2.55
HMGCS1-207ENST00000514610 UACAQ9BZF9 1416 aa-0.89□□□□□ -2.55
HMGCS1-207ENST00000514610 TRIOO75962 3097 aa-0.89□□□□□ -2.55
HMGCS1-207ENST00000514610 DNHD1Q96M86 4753 aa-0.89□□□□□ -2.55
HMGCS1-207ENST00000514610 ZNF831Q5JPB2 1677 aa-0.89□□□□□ -2.55
HMGCS1-207ENST00000514610 ARFGEF2Q9Y6D5 1785 aa-0.89□□□□□ -2.55
HMGCS1-207ENST00000514610 PIK3C2BO00750 1634 aa-0.89□□□□□ -2.55
HMGCS1-207ENST00000514610 MRPL33O75394 65 aaKnown RBP-0.9□□□□□ -2.55
HMGCS1-207ENST00000514610 LRRK2Q5S007 2527 aa-0.9□□□□□ -2.55
HMGCS1-207ENST00000514610 COL6A5A8TX70 2615 aa-0.91□□□□□ -2.55
HMGCS1-207ENST00000514610 NREPQ16612 68 aa-0.91□□□□□ -2.56
HMGCS1-207ENST00000514610 TDRG1Q3Y452 100 aa-0.91□□□□□ -2.56
HMGCS1-207ENST00000514610 ACACAQ13085 2346 aa-0.91□□□□□ -2.56
HMGCS1-207ENST00000514610 PPLO60437 1756 aa-0.91□□□□□ -2.56
HMGCS1-207ENST00000514610 FAM186AA6NE01 2351 aa-0.91□□□□□ -2.56
HMGCS1-207ENST00000514610 CMYA5Q8N3K9 4069 aa-0.92□□□□□ -2.56
HMGCS1-207ENST00000514610 DEFB110Q30KQ9 67 aa-0.92□□□□□ -2.56
HMGCS1-207ENST00000514610 PKD1L2Q7Z442 2459 aa-0.92□□□□□ -2.56
HMGCS1-207ENST00000514610 DEFA5Q01523 94 aa-0.93□□□□□ -2.56
HMGCS1-207ENST00000514610 KRTAP19-5Q3LI72 72 aa-0.93□□□□□ -2.56
HMGCS1-207ENST00000514610 DEFB106AQ8N104 65 aa-0.93□□□□□ -2.56
HMGCS1-207ENST00000514610 DYNC1H1Q14204 4646 aaKnown RBP-0.94□□□□□ -2.56
HMGCS1-207ENST00000514610 DDX60LQ5H9U9 1706 aaKnown RBP-0.94□□□□□ -2.56
HMGCS1-207ENST00000514610 KCNQ1DNQ9H478 68 aa-0.94□□□□□ -2.56
HMGCS1-207ENST00000514610 ST20Q9HBF5 79 aa-0.94□□□□□ -2.56
HMGCS1-207ENST00000514610 CEP290O15078 2479 aa-0.94□□□□□ -2.56
HMGCS1-207ENST00000514610 COL12A1Q99715 3063 aa-0.95□□□□□ -2.56
HMGCS1-207ENST00000514610 ACACBO00763 2458 aa-0.95□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms