RNA–Protein interactions for RNA: ENST00000514152.5

SH3D19-210, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SH3D19, Length 5,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-210ENST00000514152 A0A087WTM6 91 aa4.44□□□□□ -1.7
SH3D19-210ENST00000514152 KRTAP29-1A8MX34 341 aaPredicted RBP4.43□□□□□ -1.7
SH3D19-210ENST00000514152 CFAP54Q96N23 3096 aa4.43□□□□□ -1.7
SH3D19-210ENST00000514152 LINC00304Q8N9R0 145 aa4.43□□□□□ -1.7
SH3D19-210ENST00000514152 LRRK2Q5S007 2527 aa4.42□□□□□ -1.7
SH3D19-210ENST00000514152 DOPEY1Q5JWR5 2465 aa4.42□□□□□ -1.7
SH3D19-210ENST00000514152 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
SH3D19-210ENST00000514152 C20orf166-AS1Q96NR2 134 aa4.42□□□□□ -1.7
SH3D19-210ENST00000514152 A0A0D9SG42 100 aa4.41□□□□□ -1.7
SH3D19-210ENST00000514152 Q5W150 140 aa4.41□□□□□ -1.7
SH3D19-210ENST00000514152 SPTBN4Q9H254 2564 aa4.41□□□□□ -1.7
SH3D19-210ENST00000514152 KRTAP26-1Q6PEX3 210 aa4.4□□□□□ -1.7
SH3D19-210ENST00000514152 KRTAP1-3Q8IUG1 177 aa4.4□□□□□ -1.7
SH3D19-210ENST00000514152 JMJD1CQ15652 2540 aa4.4□□□□□ -1.71
SH3D19-210ENST00000514152 C9orf92A6NGG3 77 aa4.39□□□□□ -1.71
SH3D19-210ENST00000514152 KRTAP4-16G5E9R7 235 aaPredicted RBP4.39□□□□□ -1.71
SH3D19-210ENST00000514152 K7EIL1 84 aa4.39□□□□□ -1.71
SH3D19-210ENST00000514152 ZFHX3Q15911 3703 aa4.38□□□□□ -1.71
SH3D19-210ENST00000514152 MTORP42345 2549 aa4.38□□□□□ -1.71
SH3D19-210ENST00000514152 A0A087X002 238 aa4.38□□□□□ -1.71
SH3D19-210ENST00000514152 SPATA8Q6RVD6 105 aa4.37□□□□□ -1.71
SH3D19-210ENST00000514152 ADM2Q7Z4H4 148 aa4.37□□□□□ -1.71
SH3D19-210ENST00000514152 KRTAP1-1Q07627 177 aa4.36□□□□□ -1.71
SH3D19-210ENST00000514152 TRIOO75962 3097 aa4.36□□□□□ -1.71
SH3D19-210ENST00000514152 PRUNE2Q8WUY3 3088 aa4.35□□□□□ -1.71
SH3D19-210ENST00000514152 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.34□□□□□ -1.71
SH3D19-210ENST00000514152 XIRP2A4UGR9 3374 aa4.34□□□□□ -1.71
SH3D19-210ENST00000514152 ACANP16112 2415 aa4.34□□□□□ -1.71
SH3D19-210ENST00000514152 SZT2Q5T011 3432 aa4.34□□□□□ -1.72
SH3D19-210ENST00000514152 VCANP13611 3396 aa4.33□□□□□ -1.72
SH3D19-210ENST00000514152 A8MU10 97 aa4.32□□□□□ -1.72
SH3D19-210ENST00000514152 F8P00451 2351 aa4.32□□□□□ -1.72
SH3D19-210ENST00000514152 ZFYVE26Q68DK2 2539 aa4.31□□□□□ -1.72
SH3D19-210ENST00000514152 WWC2-AS2Q96NR7 200 aa4.31□□□□□ -1.72
SH3D19-210ENST00000514152 PLAC8Q9NZF1 115 aa4.31□□□□□ -1.72
SH3D19-210ENST00000514152 MGAQ8IWI9 3026 aa4.3□□□□□ -1.72
SH3D19-210ENST00000514152 LAMA1P25391 3075 aa4.3□□□□□ -1.72
SH3D19-210ENST00000514152 H1FX-AS1Q4G0G2 97 aa4.3□□□□□ -1.72
SH3D19-210ENST00000514152 CELSR3Q9NYQ7 3312 aa4.29□□□□□ -1.72
SH3D19-210ENST00000514152 WDFY4Q6ZS81 3184 aa4.28□□□□□ -1.72
SH3D19-210ENST00000514152 VPS13AQ96RL7 3174 aa4.28□□□□□ -1.72
SH3D19-210ENST00000514152 RPL37P61927 97 aaKnown RBP4.28□□□□□ -1.72
SH3D19-210ENST00000514152 SPTBN5Q9NRC6 3674 aaKnown RBP4.26□□□□□ -1.73
SH3D19-210ENST00000514152 EPG5Q9HCE0 2579 aa4.26□□□□□ -1.73
SH3D19-210ENST00000514152 R4GN34 69 aa4.24□□□□□ -1.73
SH3D19-210ENST00000514152 AKAP13Q12802 2813 aa4.24□□□□□ -1.73
SH3D19-210ENST00000514152 A8MUU9 505 aa4.24□□□□□ -1.73
SH3D19-210ENST00000514152 FASNP49327 2511 aaKnown RBP4.23□□□□□ -1.73
SH3D19-210ENST00000514152 DSPP15924 2871 aaKnown RBP4.23□□□□□ -1.73
SH3D19-210ENST00000514152 FRYQ5TBA9 3013 aa4.22□□□□□ -1.73
SH3D19-210ENST00000514152 KRTAP1-5Q9BYS1 174 aa4.22□□□□□ -1.73
SH3D19-210ENST00000514152 S4R3F8 94 aa4.22□□□□□ -1.73
SH3D19-210ENST00000514152 NBEAQ8NFP9 2946 aa4.21□□□□□ -1.74
SH3D19-210ENST00000514152 SPEGQ15772 3267 aa4.21□□□□□ -1.74
SH3D19-210ENST00000514152 FLNAP21333 2647 aaKnown RBP4.2□□□□□ -1.74
SH3D19-210ENST00000514152 KRTAP7-1Q8IUC3 87 aa4.19□□□□□ -1.74
SH3D19-210ENST00000514152 SMR3BP02814 79 aaPredicted RBP4.19□□□□□ -1.74
SH3D19-210ENST00000514152 ZNF292O60281 2723 aa4.18□□□□□ -1.74
SH3D19-210ENST00000514152 PANO1I0J062 215 aa4.18□□□□□ -1.74
SH3D19-210ENST00000514152 WDFY3Q8IZQ1 3526 aa4.18□□□□□ -1.74
SH3D19-210ENST00000514152 FRYLO94915 3013 aa4.18□□□□□ -1.74
SH3D19-210ENST00000514152 COL6A3P12111 3177 aa4.18□□□□□ -1.74
SH3D19-210ENST00000514152 COX6B2Q6YFQ2 88 aa4.15□□□□□ -1.75
SH3D19-210ENST00000514152 ITPR3Q14573 2671 aa4.15□□□□□ -1.75
SH3D19-210ENST00000514152 FREM2Q5SZK8 3169 aa4.15□□□□□ -1.75
SH3D19-210ENST00000514152 REV3LO60673 3130 aa4.15□□□□□ -1.75
SH3D19-210ENST00000514152 KRTAP11-1Q8IUC1 163 aa4.14□□□□□ -1.75
SH3D19-210ENST00000514152 MYO15AQ9UKN7 3530 aa4.13□□□□□ -1.75
SH3D19-210ENST00000514152 HECTD1Q9ULT8 2610 aa4.13□□□□□ -1.75
SH3D19-210ENST00000514152 Q6ZSA8 131 aa4.13□□□□□ -1.75
SH3D19-210ENST00000514152 KALRNO60229 2985 aa4.13□□□□□ -1.75
SH3D19-210ENST00000514152 KRTAP13-1Q8IUC0 172 aa4.12□□□□□ -1.75
SH3D19-210ENST00000514152 BOD1L1Q8NFC6 3051 aa4.11□□□□□ -1.75
SH3D19-210ENST00000514152 CENPEQ02224 2701 aa4.1□□□□□ -1.75
SH3D19-210ENST00000514152 EYSQ5T1H1 3165 aa4.1□□□□□ -1.75
SH3D19-210ENST00000514152 ADGRG4Q8IZF6 3080 aa4.09□□□□□ -1.75
SH3D19-210ENST00000514152 LRBAP50851 2863 aa4.09□□□□□ -1.75
SH3D19-210ENST00000514152 CHD6Q8TD26 2715 aa4.09□□□□□ -1.75
SH3D19-210ENST00000514152 ATRQ13535 2644 aa4.08□□□□□ -1.76
SH3D19-210ENST00000514152 GCN1Q92616 2671 aaKnown RBP4.07□□□□□ -1.76
SH3D19-210ENST00000514152 ZZEF1O43149 2961 aa4.05□□□□□ -1.76
SH3D19-210ENST00000514152 RPS29P62273 56 aaKnown RBP4.05□□□□□ -1.76
SH3D19-210ENST00000514152 MAP1AP78559 2803 aaPredicted RBP4.05□□□□□ -1.76
SH3D19-210ENST00000514152 M0QZ58 72 aa4.05□□□□□ -1.76
SH3D19-210ENST00000514152 ATMQ13315 3056 aa4.03□□□□□ -1.76
SH3D19-210ENST00000514152 CFAP46Q8IYW2 2715 aa4.03□□□□□ -1.76
SH3D19-210ENST00000514152 NBEAL2Q6ZNJ1 2754 aa4.03□□□□□ -1.76
SH3D19-210ENST00000514152 KRTAP10-1P60331 282 aa4.03□□□□□ -1.76
SH3D19-210ENST00000514152 UNC79Q9P2D8 2635 aa4.03□□□□□ -1.76
SH3D19-210ENST00000514152 USP24Q9UPU5 2620 aa4.02□□□□□ -1.77
SH3D19-210ENST00000514152 Q6ZRN7 208 aaPredicted RBP4.02□□□□□ -1.77
SH3D19-210ENST00000514152 KRTAP10-2P60368 255 aa4.02□□□□□ -1.77
SH3D19-210ENST00000514152 TACC2O95359 2948 aa4.01□□□□□ -1.77
SH3D19-210ENST00000514152 TEX15Q9BXT5 2789 aa4.01□□□□□ -1.77
SH3D19-210ENST00000514152 KRTAP13-2Q52LG2 175 aa4□□□□□ -1.77
SH3D19-210ENST00000514152 IGSF10Q6WRI0 2623 aa3.99□□□□□ -1.77
SH3D19-210ENST00000514152 MGAM2Q2M2H8 2515 aa3.99□□□□□ -1.77
SH3D19-210ENST00000514152 DMXL2Q8TDJ6 3036 aa3.98□□□□□ -1.77
SH3D19-210ENST00000514152 H0YAA0 97 aa3.98□□□□□ -1.77
SH3D19-210ENST00000514152 LOC400499M0QZD8 3231 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms