RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 OTOGQ6ZRI0 2925 aa7.37□□□□□ -1.23
CTNND2-215ENST00000513588 A8MUN3 132 aa7.36□□□□□ -1.23
CTNND2-215ENST00000513588 IGLV5-37A0A075B6J1 123 aa7.36□□□□□ -1.23
CTNND2-215ENST00000513588 CHTF8P0CG12 524 aa7.36□□□□□ -1.23
CTNND2-215ENST00000513588 ZNF469Q96JG9 3925 aaPredicted RBP7.35□□□□□ -1.23
CTNND2-215ENST00000513588 PHF5AQ7RTV0 110 aaKnown RBP7.35□□□□□ -1.23
CTNND2-215ENST00000513588 IGFL1Q6UW32 110 aa7.35□□□□□ -1.23
CTNND2-215ENST00000513588 CASC2Q6XLA1 102 aa7.34□□□□□ -1.23
CTNND2-215ENST00000513588 TENM3Q9P273 2699 aa7.34□□□□□ -1.23
CTNND2-215ENST00000513588 IGLV9-49A0A0B4J1Y8 123 aa7.34□□□□□ -1.23
CTNND2-215ENST00000513588 K7EIL1 84 aa7.34□□□□□ -1.23
CTNND2-215ENST00000513588 KMT2BQ9UMN6 2715 aaPredicted RBP7.33□□□□□ -1.24
CTNND2-215ENST00000513588 EPM2AB3EWF7 344 aa7.33□□□□□ -1.24
CTNND2-215ENST00000513588 SPRR1AP35321 89 aa7.33□□□□□ -1.24
CTNND2-215ENST00000513588 RPL37AP61513 92 aaKnown RBP7.33□□□□□ -1.24
CTNND2-215ENST00000513588 CD164Q04900 197 aa7.32□□□□□ -1.24
CTNND2-215ENST00000513588 PRR15LQ9BU68 103 aa7.32□□□□□ -1.24
CTNND2-215ENST00000513588 C4orf48Q5BLP8 95 aa7.31□□□□□ -1.24
CTNND2-215ENST00000513588 SPRR4Q96PI1 79 aa7.31□□□□□ -1.24
CTNND2-215ENST00000513588 DSCR10P59022 87 aa7.3□□□□□ -1.24
CTNND2-215ENST00000513588 H0Y9P7 68 aa7.3□□□□□ -1.24
CTNND2-215ENST00000513588 KRTAP4-16G5E9R7 235 aaPredicted RBP7.28□□□□□ -1.24
CTNND2-215ENST00000513588 PKD1L1Q8TDX9 2849 aa7.28□□□□□ -1.24
CTNND2-215ENST00000513588 A8MU10 97 aa7.27□□□□□ -1.25
CTNND2-215ENST00000513588 RBM12B-AS1Q9P1G2 102 aa7.27□□□□□ -1.25
CTNND2-215ENST00000513588 STAB2Q8WWQ8 2551 aa7.26□□□□□ -1.25
CTNND2-215ENST00000513588 TNP2Q05952 138 aa7.26□□□□□ -1.25
CTNND2-215ENST00000513588 CNBPP62633 177 aaKnown RBP7.25□□□□□ -1.25
CTNND2-215ENST00000513588 TRAV22A0A0B4J277 110 aa7.25□□□□□ -1.25
CTNND2-215ENST00000513588 C1orf64Q8NEQ6 169 aa7.25□□□□□ -1.25
CTNND2-215ENST00000513588 hDV103S1A0JD37 113 aa7.24□□□□□ -1.25
CTNND2-215ENST00000513588 ANK3Q12955 4377 aaKnown RBP7.24□□□□□ -1.25
CTNND2-215ENST00000513588 NUPR2A6NF83 97 aa7.23□□□□□ -1.25
CTNND2-215ENST00000513588 H3BS24 57 aa7.23□□□□□ -1.25
CTNND2-215ENST00000513588 MDFIQ99750 246 aa7.23□□□□□ -1.25
CTNND2-215ENST00000513588 AKAP9Q99996 3911 aa7.23□□□□□ -1.25
CTNND2-215ENST00000513588 NBDYA0A0U1RRE5 68 aa7.22□□□□□ -1.25
CTNND2-215ENST00000513588 SPINK6Q6UWN8 80 aa7.22□□□□□ -1.25
CTNND2-215ENST00000513588 ZNF706Q9Y5V0 76 aaPredicted RBP7.22□□□□□ -1.25
CTNND2-215ENST00000513588 KRTAP7-1Q8IUC3 87 aa7.22□□□□□ -1.25
CTNND2-215ENST00000513588 A8MWP4 228 aa7.21□□□□□ -1.25
CTNND2-215ENST00000513588 PRR15Q8IV56 129 aa7.21□□□□□ -1.25
CTNND2-215ENST00000513588 KRTAP1-5Q9BYS1 174 aa7.21□□□□□ -1.25
CTNND2-215ENST00000513588 IGHV6-1A0A0B4J1U7 121 aa7.21□□□□□ -1.26
CTNND2-215ENST00000513588 C9orf163Q8N9P6 203 aa7.21□□□□□ -1.26
CTNND2-215ENST00000513588 PCOTHQ58A44 107 aa7.21□□□□□ -1.26
CTNND2-215ENST00000513588 TRRAPQ9Y4A5 3859 aa7.19□□□□□ -1.26
CTNND2-215ENST00000513588 FBN1P35555 2871 aaKnown RBP7.19□□□□□ -1.26
CTNND2-215ENST00000513588 APLNQ9ULZ1 77 aa7.18□□□□□ -1.26
CTNND2-215ENST00000513588 H3BPC8 53 aa7.17□□□□□ -1.26
CTNND2-215ENST00000513588 MOBPQ13875 183 aa7.16□□□□□ -1.26
CTNND2-215ENST00000513588 KTN1-AS1Q86SY8 53 aa7.16□□□□□ -1.26
CTNND2-215ENST00000513588 IGLV8-61A0A075B6I0 122 aa7.14□□□□□ -1.27
CTNND2-215ENST00000513588 CIRBP-AS1Q8TBR5 109 aa7.12□□□□□ -1.27
CTNND2-215ENST00000513588 IGLV5-52A0A0A0MRZ9 124 aa7.12□□□□□ -1.27
CTNND2-215ENST00000513588 TP53AIP1Q9HCN2 124 aa7.12□□□□□ -1.27
CTNND2-215ENST00000513588 SPAG11AQ6PDA7 123 aa7.11□□□□□ -1.27
CTNND2-215ENST00000513588 RTL8CO15255 209 aa7.1□□□□□ -1.27
CTNND2-215ENST00000513588 PRAC1Q96KF2 57 aa7.1□□□□□ -1.27
CTNND2-215ENST00000513588 SPRR1BP22528 89 aa7.09□□□□□ -1.27
CTNND2-215ENST00000513588 CYP4F30PQ9H0H9 118 aa7.09□□□□□ -1.27
CTNND2-215ENST00000513588 LIMD2Q9BT23 127 aa7.08□□□□□ -1.28
CTNND2-215ENST00000513588 LY6G6CO95867 125 aa7.08□□□□□ -1.28
CTNND2-215ENST00000513588 ANAPC11Q9NYG5 84 aa7.08□□□□□ -1.28
CTNND2-215ENST00000513588 LINC00472Q9H8W2 130 aa7.08□□□□□ -1.28
CTNND2-215ENST00000513588 KRTAP11-1Q8IUC1 163 aa7.07□□□□□ -1.28
CTNND2-215ENST00000513588 ZCCHC13Q8WW36 166 aaKnown RBP7.07□□□□□ -1.28
CTNND2-215ENST00000513588 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.07□□□□□ -1.28
CTNND2-215ENST00000513588 C8orf17Q9NRJ1 99 aa7.07□□□□□ -1.28
CTNND2-215ENST00000513588 A0A087WTM6 91 aa7.06□□□□□ -1.28
CTNND2-215ENST00000513588 C1orf134Q5TEV5 83 aa7.06□□□□□ -1.28
CTNND2-215ENST00000513588 LCE6AA0A183 80 aa7.05□□□□□ -1.28
CTNND2-215ENST00000513588 Q1T7F1 81 aa7.05□□□□□ -1.28
CTNND2-215ENST00000513588 SPANXA2-OT1Q8N9U9 137 aa7.05□□□□□ -1.28
CTNND2-215ENST00000513588 PSORS1C2Q9UIG4 136 aa7.05□□□□□ -1.28
CTNND2-215ENST00000513588 COA5Q86WW8 74 aa7.04□□□□□ -1.28
CTNND2-215ENST00000513588 A0A1B0GVX0 72 aa7.03□□□□□ -1.28
CTNND2-215ENST00000513588 PANO1I0J062 215 aa7.03□□□□□ -1.28
CTNND2-215ENST00000513588 MMP24-AS1A0A0U1RRL7 71 aa7.03□□□□□ -1.28
CTNND2-215ENST00000513588 MRPL34Q9BQ48 92 aaKnown RBP7.03□□□□□ -1.28
CTNND2-215ENST00000513588 KRTAP29-1A8MX34 341 aaPredicted RBP7.03□□□□□ -1.28
CTNND2-215ENST00000513588 ZNF861PO60384 105 aa7.03□□□□□ -1.28
CTNND2-215ENST00000513588 SPACA4Q8TDM5 124 aa7.01□□□□□ -1.29
CTNND2-215ENST00000513588 Q5VV11 94 aa7□□□□□ -1.29
CTNND2-215ENST00000513588 C8orf87E5RJ46 101 aa6.99□□□□□ -1.29
CTNND2-215ENST00000513588 RETNLBQ9BQ08 111 aa6.99□□□□□ -1.29
CTNND2-215ENST00000513588 C7orf65Q6ZTY9 151 aa6.99□□□□□ -1.29
CTNND2-215ENST00000513588 ATP11AUNQ6ZP68 121 aa6.99□□□□□ -1.29
CTNND2-215ENST00000513588 TENM2Q9NT68 2774 aa6.97□□□□□ -1.29
CTNND2-215ENST00000513588 LCA10Q71F78 164 aa6.96□□□□□ -1.29
CTNND2-215ENST00000513588 IGLV7-46A0A075B6I9 117 aa6.95□□□□□ -1.3
CTNND2-215ENST00000513588 LOC101927531A0A1B0GV80 90 aa6.94□□□□□ -1.3
CTNND2-215ENST00000513588 Q8N9P0 234 aaPredicted RBP6.93□□□□□ -1.3
CTNND2-215ENST00000513588 WWC2-AS2Q96NR7 200 aa6.93□□□□□ -1.3
CTNND2-215ENST00000513588 IGLV7-43P04211 117 aa6.92□□□□□ -1.3
CTNND2-215ENST00000513588 FLG2Q5D862 2391 aaPredicted RBP6.91□□□□□ -1.3
CTNND2-215ENST00000513588 Q6ZRN7 208 aaPredicted RBP6.91□□□□□ -1.3
CTNND2-215ENST00000513588 LINC00313P59037 77 aa6.91□□□□□ -1.3
CTNND2-215ENST00000513588 SRRM2Q9UQ35 2752 aaKnown RBP6.9□□□□□ -1.3
CTNND2-215ENST00000513588 KRTAP13-1Q8IUC0 172 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms