RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 CLLU1Q5K131 121 aa4.25□□□□□ -1.73
PTPN20-228ENST00000513266 COMMD7Q86VX2 200 aa4.25□□□□□ -1.73
PTPN20-228ENST00000513266 CBY1Q9Y3M2 126 aa4.25□□□□□ -1.73
PTPN20-228ENST00000513266 LST1O00453 97 aa4.24□□□□□ -1.73
PTPN20-228ENST00000513266 RPS10P5Q9NQ39 176 aa4.24□□□□□ -1.73
PTPN20-228ENST00000513266 DSTQ03001 7570 aaKnown RBP4.24□□□□□ -1.73
PTPN20-228ENST00000513266 SCGB1D1O95968 90 aa4.23□□□□□ -1.73
PTPN20-228ENST00000513266 NPC2P61916 151 aa4.23□□□□□ -1.73
PTPN20-228ENST00000513266 A0A1W2PNM2 257 aa4.22□□□□□ -1.73
PTPN20-228ENST00000513266 TRIAP1O43715 76 aa4.22□□□□□ -1.73
PTPN20-228ENST00000513266 TSPEAR-AS2P59090 65 aa4.22□□□□□ -1.73
PTPN20-228ENST00000513266 KRTAP8-1Q8IUC2 63 aa4.22□□□□□ -1.73
PTPN20-228ENST00000513266 SLC7A5P1Q8MH63 180 aa4.22□□□□□ -1.73
PTPN20-228ENST00000513266 CLEC2BQ92478 149 aa4.22□□□□□ -1.73
PTPN20-228ENST00000513266 RHEBQ15382 184 aa4.21□□□□□ -1.74
PTPN20-228ENST00000513266 OR13C6PQ8NH95 151 aa4.21□□□□□ -1.74
PTPN20-228ENST00000513266 FAM218AQ96MZ4 157 aa4.21□□□□□ -1.74
PTPN20-228ENST00000513266 SMCO4Q9NRQ5 59 aa4.21□□□□□ -1.74
PTPN20-228ENST00000513266 PCP4P48539 62 aa4.2□□□□□ -1.74
PTPN20-228ENST00000513266 PEA15Q15121 130 aa4.2□□□□□ -1.74
PTPN20-228ENST00000513266 NDUFA5Q16718 116 aa4.2□□□□□ -1.74
PTPN20-228ENST00000513266 SPRR2GQ9BYE4 73 aa4.2□□□□□ -1.74
PTPN20-228ENST00000513266 Q6JHZ5 121 aa4.19□□□□□ -1.74
PTPN20-228ENST00000513266 F8WEM9 126 aa4.18□□□□□ -1.74
PTPN20-228ENST00000513266 PMCHL1Q16048 86 aa4.18□□□□□ -1.74
PTPN20-228ENST00000513266 ADAMTSL4-AS1Q5T5F5 129 aa4.18□□□□□ -1.74
PTPN20-228ENST00000513266 SPINK7P58062 85 aa4.17□□□□□ -1.74
PTPN20-228ENST00000513266 UQCC3Q6UW78 93 aa4.17□□□□□ -1.74
PTPN20-228ENST00000513266 URB1-AS1Q96HZ7 61 aa4.17□□□□□ -1.74
PTPN20-228ENST00000513266 TRBV7-6A0A0J9YX20 115 aa4.16□□□□□ -1.74
PTPN20-228ENST00000513266 A0A1B0GWB2 263 aa4.16□□□□□ -1.74
PTPN20-228ENST00000513266 TMEM218A2RU14 115 aa4.16□□□□□ -1.74
PTPN20-228ENST00000513266 KRTAP5-10Q6L8G5 202 aa4.16□□□□□ -1.74
PTPN20-228ENST00000513266 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
PTPN20-228ENST00000513266 SPANXDQ9BXN6 97 aa4.16□□□□□ -1.74
PTPN20-228ENST00000513266 KRTAP3-1Q9BYR8 98 aa4.16□□□□□ -1.74
PTPN20-228ENST00000513266 IMUPQ9GZP8 106 aa4.16□□□□□ -1.74
PTPN20-228ENST00000513266 WFDC13Q8IUB5 93 aa4.15□□□□□ -1.75
PTPN20-228ENST00000513266 COLCA2A8K830 154 aa4.14□□□□□ -1.75
PTPN20-228ENST00000513266 APOC3P02656 99 aa4.14□□□□□ -1.75
PTPN20-228ENST00000513266 LINC00313P59037 77 aa4.14□□□□□ -1.75
PTPN20-228ENST00000513266 SPANXCQ9NY87 97 aa4.14□□□□□ -1.75
PTPN20-228ENST00000513266 TRAV12-1A0A0B4J245 112 aa4.13□□□□□ -1.75
PTPN20-228ENST00000513266 LEPROTO15243 131 aa4.13□□□□□ -1.75
PTPN20-228ENST00000513266 LINC00518Q8N0U6 118 aa4.13□□□□□ -1.75
PTPN20-228ENST00000513266 SEC11CQ9BY50 192 aa4.13□□□□□ -1.75
PTPN20-228ENST00000513266 AHNAK2Q8IVF2 5795 aa4.12□□□□□ -1.75
PTPN20-228ENST00000513266 ZNF815PA8K554 130 aa4.12□□□□□ -1.75
PTPN20-228ENST00000513266 S100A1P23297 94 aa4.12□□□□□ -1.75
PTPN20-228ENST00000513266 J3QQQ9 107 aa4.11□□□□□ -1.75
PTPN20-228ENST00000513266 MT-ND4LP03901 98 aa4.11□□□□□ -1.75
PTPN20-228ENST00000513266 OCIAD2Q56VL3 154 aa4.11□□□□□ -1.75
PTPN20-228ENST00000513266 SS18L2Q9UHA2 77 aa4.11□□□□□ -1.75
PTPN20-228ENST00000513266 TRAV13-2A0A0B4J235 113 aa4.1□□□□□ -1.75
PTPN20-228ENST00000513266 SNAPINO95295 136 aa4.1□□□□□ -1.75
PTPN20-228ENST00000513266 LINC00614P0C842 121 aa4.1□□□□□ -1.75
PTPN20-228ENST00000513266 SVBPQ8N300 66 aa4.1□□□□□ -1.75
PTPN20-228ENST00000513266 LINC00308Q8TCZ7 52 aa4.1□□□□□ -1.75
PTPN20-228ENST00000513266 A0A0J9YXY3 114 aa4.09□□□□□ -1.75
PTPN20-228ENST00000513266 FAM236AA0A1B0GUQ0 79 aa4.09□□□□□ -1.75
PTPN20-228ENST00000513266 FAM236BA0A1B0GV22 79 aa4.09□□□□□ -1.75
PTPN20-228ENST00000513266 NMUP48645 174 aa4.09□□□□□ -1.75
PTPN20-228ENST00000513266 H1FX-AS1Q4G0G2 97 aa4.09□□□□□ -1.75
PTPN20-228ENST00000513266 HMCN1Q96RW7 5635 aa4.08□□□□□ -1.76
PTPN20-228ENST00000513266 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
PTPN20-228ENST00000513266 SIGMAR1Q99720 223 aa4.08□□□□□ -1.76
PTPN20-228ENST00000513266 C18orf32Q8TCD1 76 aa4.07□□□□□ -1.76
PTPN20-228ENST00000513266 ZCCHC13Q8WW36 166 aaKnown RBP4.07□□□□□ -1.76
PTPN20-228ENST00000513266 IFI27L1Q96BM0 104 aa4.07□□□□□ -1.76
PTPN20-228ENST00000513266 LITAFQ99732 161 aa4.06□□□□□ -1.76
PTPN20-228ENST00000513266 NHP2Q9NX24 153 aaKnown RBP4.06□□□□□ -1.76
PTPN20-228ENST00000513266 A4D1N5 150 aa4.05□□□□□ -1.76
PTPN20-228ENST00000513266 H3BUT2 72 aa4.05□□□□□ -1.76
PTPN20-228ENST00000513266 S100PP25815 95 aa4.05□□□□□ -1.76
PTPN20-228ENST00000513266 FABP9Q0Z7S8 132 aa4.05□□□□□ -1.76
PTPN20-228ENST00000513266 A0A087WSZ3 146 aa4.03□□□□□ -1.76
PTPN20-228ENST00000513266 KRTAP23-1A1A580 65 aa4.03□□□□□ -1.76
PTPN20-228ENST00000513266 Q6ZQY7 126 aa4.03□□□□□ -1.76
PTPN20-228ENST00000513266 YPEL4Q96NS1 127 aa4.01□□□□□ -1.77
PTPN20-228ENST00000513266 IGKV4-1P06312 121 aa4□□□□□ -1.77
PTPN20-228ENST00000513266 TEN1Q86WV5 123 aa4□□□□□ -1.77
PTPN20-228ENST00000513266 H0Y8G0 127 aa3.99□□□□□ -1.77
PTPN20-228ENST00000513266 SERF1AO75920 110 aa3.99□□□□□ -1.77
PTPN20-228ENST00000513266 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
PTPN20-228ENST00000513266 HERVK_113P61574 105 aa3.99□□□□□ -1.77
PTPN20-228ENST00000513266 MT1XP80297 61 aa3.99□□□□□ -1.77
PTPN20-228ENST00000513266 TRAPPC1Q9Y5R8 145 aa3.99□□□□□ -1.77
PTPN20-228ENST00000513266 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
PTPN20-228ENST00000513266 PET117Q6UWS5 81 aa3.98□□□□□ -1.77
PTPN20-228ENST00000513266 LINC00575Q6W349 94 aa3.98□□□□□ -1.77
PTPN20-228ENST00000513266 IGHV6-1A0A0B4J1U7 121 aa3.97□□□□□ -1.77
PTPN20-228ENST00000513266 A6NDN8 102 aa3.97□□□□□ -1.77
PTPN20-228ENST00000513266 TIMM17BO60830 172 aa3.97□□□□□ -1.77
PTPN20-228ENST00000513266 TRGC2P03986 189 aa3.97□□□□□ -1.77
PTPN20-228ENST00000513266 COX19Q49B96 90 aa3.97□□□□□ -1.77
PTPN20-228ENST00000513266 SMIM11BQ8TCY0 68 aa3.97□□□□□ -1.77
PTPN20-228ENST00000513266 PLNP26678 52 aa3.96□□□□□ -1.78
PTPN20-228ENST00000513266 MT4P47944 62 aa3.95□□□□□ -1.78
PTPN20-228ENST00000513266 C5orf47Q569G3 176 aa3.95□□□□□ -1.78
PTPN20-228ENST00000513266 SNHG12Q9BXW3 62 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms