RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 NAT8BQ9UHF3 227 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 DNAH8Q96JB1 4490 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 PKD1P98161 4303 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 TRAV12-1A0A0B4J245 112 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 IGHV1-58A0A0C4DH39 117 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 LOC107984640A0A0U1RRK4 108 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 D6R8Y8 96 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 TRGC2P03986 189 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 S100PP25815 95 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 IFI27P40305 119 aaPredicted RBP0.98□□□□□ -2.25
CHD1-210ENST00000513064 POLR2KP53803 58 aaKnown RBP0.98□□□□□ -2.25
CHD1-210ENST00000513064 CKS1BP61024 79 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 RPL39P62891 51 aaKnown RBP0.98□□□□□ -2.25
CHD1-210ENST00000513064 HBBP68871 147 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 IQCJQ1A5X6 159 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 C1orf137Q5JT78 98 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 NUP35Q8NFH5 326 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 CARD19Q96LW7 228 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 C2orf88Q9BSF0 95 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 NHP2Q9NX24 153 aaKnown RBP0.98□□□□□ -2.25
CHD1-210ENST00000513064 V9GYV3 84 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 EPPK1P58107 5090 aaKnown RBP0.98□□□□□ -2.25
CHD1-210ENST00000513064 RYR3Q15413 4870 aa0.98□□□□□ -2.25
CHD1-210ENST00000513064 KMT2CQ8NEZ4 4911 aaKnown RBP0.98□□□□□ -2.25
CHD1-210ENST00000513064 BIRC6Q9NR09 4857 aa0.97□□□□□ -2.25
CHD1-210ENST00000513064 A0A096LNI7 61 aa0.97□□□□□ -2.25
CHD1-210ENST00000513064 SMIM27A0A1W2PRY6 76 aa0.97□□□□□ -2.25
CHD1-210ENST00000513064 NDUFA1O15239 70 aa0.97□□□□□ -2.25
CHD1-210ENST00000513064 APOC3P02656 99 aa0.97□□□□□ -2.25
CHD1-210ENST00000513064 ZNF25P17030 456 aaPredicted RBP0.97□□□□□ -2.25
CHD1-210ENST00000513064 UBE2D1P51668 147 aa0.97□□□□□ -2.25
CHD1-210ENST00000513064 SPAG11BQ08648 103 aa0.97□□□□□ -2.25
CHD1-210ENST00000513064 Q6ZUT4 128 aa0.97□□□□□ -2.25
CHD1-210ENST00000513064 PHF5AQ7RTV0 110 aaKnown RBP0.97□□□□□ -2.25
CHD1-210ENST00000513064 TMEM141Q96I45 108 aa0.97□□□□□ -2.25
CHD1-210ENST00000513064 C20orf78Q9BR46 151 aa0.97□□□□□ -2.25
CHD1-210ENST00000513064 SMIM2Q9BVW6 85 aa0.97□□□□□ -2.25
CHD1-210ENST00000513064 CDC42SE2Q9NRR3 84 aa0.97□□□□□ -2.25
CHD1-210ENST00000513064 SPANXA1Q9NS26 97 aa0.97□□□□□ -2.25
CHD1-210ENST00000513064 DNAH5Q8TE73 4624 aa0.97□□□□□ -2.25
CHD1-210ENST00000513064 PKHD1L1Q86WI1 4243 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 AHNAK2Q8IVF2 5795 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 GVQW2A0A096LPI5 108 aaPredicted RBP0.96□□□□□ -2.26
CHD1-210ENST00000513064 A0A1B0GV72 72 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 H3BRM9 83 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 SPINK8P0C7L1 97 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 LINC00158P58513 81 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 CNBPP62633 177 aaKnown RBP0.96□□□□□ -2.26
CHD1-210ENST00000513064 C9orf116Q5BN46 136 aaPredicted RBP0.96□□□□□ -2.26
CHD1-210ENST00000513064 MEIG1Q5JSS6 88 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 TMEM170BQ5T4T1 132 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 KRTAP26-1Q6PEX3 210 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 C2orf82Q6UX34 121 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.96□□□□□ -2.26
CHD1-210ENST00000513064 BAGE3Q86Y29 109 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 Q8N8P6 123 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 COX7B2Q8TF08 81 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 PLEKHB2Q96CS7 222 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 SEC11CQ9BY50 192 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 NXT2Q9NPJ8 142 aaKnown RBP0.96□□□□□ -2.26
CHD1-210ENST00000513064 C14orf132Q9NPU4 83 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 PLAC8Q9NZF1 115 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 LINC00474Q9P2X8 69 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 UBE2D4Q9Y2X8 147 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 LRP1BQ9NZR2 4599 aa0.96□□□□□ -2.26
CHD1-210ENST00000513064 HSPG2P98160 4391 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 VPS13BQ7Z7G8 4022 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 IGKV2D-26A0A0A0MRZ7 120 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 TRBV30A0A0K0K1B3 111 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 TRBV27A0A0K0K1C4 114 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 TMEM218A2RU14 115 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 LINC01549A6NIU2 74 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 FABP4P15090 132 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 ROMO1P60602 79 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 SEC11AP67812 179 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 S100A12P80511 92 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 MRPS36P82909 103 aaKnown RBP0.95□□□□□ -2.26
CHD1-210ENST00000513064 PMCHL1Q16048 86 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 CLLU1Q5K131 121 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 DIRC1Q969H9 104 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 CDKN2A-AS1Q9UH64 79 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 LAMTOR2Q9Y2Q5 125 aa0.95□□□□□ -2.26
CHD1-210ENST00000513064 APOBP04114 4563 aaKnown RBP0.94□□□□□ -2.26
CHD1-210ENST00000513064 KIAA1109Q2LD37 5005 aa0.94□□□□□ -2.26
CHD1-210ENST00000513064 F8VRH5 84 aa0.94□□□□□ -2.26
CHD1-210ENST00000513064 HBDP02042 147 aa0.94□□□□□ -2.26
CHD1-210ENST00000513064 ADCYAP1P18509 176 aa0.94□□□□□ -2.26
CHD1-210ENST00000513064 NPC2P61916 151 aa0.94□□□□□ -2.26
CHD1-210ENST00000513064 SPINK6Q6UWN8 80 aa0.94□□□□□ -2.26
CHD1-210ENST00000513064 Q8IZM0 81 aa0.94□□□□□ -2.26
CHD1-210ENST00000513064 FAM19A2Q8N3H0 131 aa0.94□□□□□ -2.26
CHD1-210ENST00000513064 TMEM254Q8TBM7 123 aa0.94□□□□□ -2.26
CHD1-210ENST00000513064 CHCHD1Q96BP2 118 aaKnown RBP0.94□□□□□ -2.26
CHD1-210ENST00000513064 AMELXQ99217 191 aa0.94□□□□□ -2.26
CHD1-210ENST00000513064 CNFNQ9BYD5 112 aa0.94□□□□□ -2.26
CHD1-210ENST00000513064 MRPL35Q9NZE8 188 aaKnown RBP0.94□□□□□ -2.26
CHD1-210ENST00000513064 C6orf48Q9UBA6 75 aa0.94□□□□□ -2.26
CHD1-210ENST00000513064 C22orf24Q9Y442 160 aa0.94□□□□□ -2.26
CHD1-210ENST00000513064 RYR1P21817 5038 aa0.94□□□□□ -2.26
CHD1-210ENST00000513064 PKHD1P08F94 4074 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms