RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 H3BVH4 76 aa-0.15□□□□□ -2.43
RFC1-214ENST00000512726 LMTK2Q8IWU2 1503 aa-0.15□□□□□ -2.43
RFC1-214ENST00000512726 ITSN1Q15811 1721 aa-0.16□□□□□ -2.43
RFC1-214ENST00000512726 CREBBPQ92793 2442 aa-0.16□□□□□ -2.43
RFC1-214ENST00000512726 RALGAPBQ86X10 1494 aa-0.16□□□□□ -2.44
RFC1-214ENST00000512726 HFM1A2PYH4 1435 aa-0.17□□□□□ -2.44
RFC1-214ENST00000512726 H0YAA0 97 aa-0.17□□□□□ -2.44
RFC1-214ENST00000512726 TJP1Q07157 1748 aa-0.17□□□□□ -2.44
RFC1-214ENST00000512726 STAB2Q8WWQ8 2551 aa-0.18□□□□□ -2.44
RFC1-214ENST00000512726 THOC2Q8NI27 1593 aaKnown RBP-0.19□□□□□ -2.44
RFC1-214ENST00000512726 IQGAP3Q86VI3 1631 aa-0.19□□□□□ -2.44
RFC1-214ENST00000512726 DEFB131BA0A096LNP1 70 aa-0.19□□□□□ -2.44
RFC1-214ENST00000512726 MRPL33O75394 65 aaKnown RBP-0.19□□□□□ -2.44
RFC1-214ENST00000512726 SRRM2Q9UQ35 2752 aaKnown RBP-0.2□□□□□ -2.44
RFC1-214ENST00000512726 PARP4Q9UKK3 1724 aaKnown RBP-0.21□□□□□ -2.44
RFC1-214ENST00000512726 UGGT2Q9NYU1 1516 aa-0.21□□□□□ -2.44
RFC1-214ENST00000512726 LRP1BQ9NZR2 4599 aa-0.21□□□□□ -2.44
RFC1-214ENST00000512726 MUC2Q02817 5179 aa-0.21□□□□□ -2.44
RFC1-214ENST00000512726 NBEAL1Q6ZS30 2694 aa-0.21□□□□□ -2.44
RFC1-214ENST00000512726 UBL5Q9BZL1 73 aa-0.21□□□□□ -2.44
RFC1-214ENST00000512726 SMCO4Q9NRQ5 59 aa-0.21□□□□□ -2.44
RFC1-214ENST00000512726 SVEP1Q4LDE5 3571 aa-0.23□□□□□ -2.45
RFC1-214ENST00000512726 PKHD1P08F94 4074 aa-0.23□□□□□ -2.45
RFC1-214ENST00000512726 KRTAP6-1Q3LI64 71 aa-0.23□□□□□ -2.45
RFC1-214ENST00000512726 KCNQ1DNQ9H478 68 aa-0.23□□□□□ -2.45
RFC1-214ENST00000512726 LYNX1G3V0Z9 82 aa-0.24□□□□□ -2.45
RFC1-214ENST00000512726 FLGP20930 4061 aaPredicted RBP-0.24□□□□□ -2.45
RFC1-214ENST00000512726 DSPP15924 2871 aaKnown RBP-0.24□□□□□ -2.45
RFC1-214ENST00000512726 PRRC2CQ9Y520 2896 aaKnown RBP-0.24□□□□□ -2.45
RFC1-214ENST00000512726 TGP01266 2768 aa-0.25□□□□□ -2.45
RFC1-214ENST00000512726 SETD2Q9BYW2 2564 aaPredicted RBP-0.25□□□□□ -2.45
RFC1-214ENST00000512726 PDZD2O15018 2839 aa-0.25□□□□□ -2.45
RFC1-214ENST00000512726 LYSTQ99698 3801 aa-0.25□□□□□ -2.45
RFC1-214ENST00000512726 TNRC18O15417 2968 aaPredicted RBP-0.26□□□□□ -2.45
RFC1-214ENST00000512726 PDCD5O14737 125 aa-0.27□□□□□ -2.45
RFC1-214ENST00000512726 ENHOQ6UWT2 76 aa-0.27□□□□□ -2.45
RFC1-214ENST00000512726 NRAPQ86VF7 1730 aa-0.27□□□□□ -2.45
RFC1-214ENST00000512726 RNF17Q9BXT8 1623 aaKnown RBP-0.27□□□□□ -2.45
RFC1-214ENST00000512726 SPG11Q96JI7 2443 aa-0.28□□□□□ -2.45
RFC1-214ENST00000512726 DUOX2Q9NRD8 1548 aa-0.29□□□□□ -2.46
RFC1-214ENST00000512726 SPTBN4Q9H254 2564 aa-0.3□□□□□ -2.46
RFC1-214ENST00000512726 ZZEF1O43149 2961 aa-0.3□□□□□ -2.46
RFC1-214ENST00000512726 PKD1P98161 4303 aa-0.3□□□□□ -2.46
RFC1-214ENST00000512726 ZC3H13Q5T200 1668 aaKnown RBP-0.3□□□□□ -2.46
RFC1-214ENST00000512726 CDC42BPGQ6DT37 1551 aa-0.31□□□□□ -2.46
RFC1-214ENST00000512726 NF1P21359 2839 aa-0.32□□□□□ -2.46
RFC1-214ENST00000512726 EPG5Q9HCE0 2579 aa-0.32□□□□□ -2.46
RFC1-214ENST00000512726 DSTQ03001 7570 aaKnown RBP-0.32□□□□□ -2.46
RFC1-214ENST00000512726 IAPPP10997 89 aa-0.32□□□□□ -2.46
RFC1-214ENST00000512726 SPRR2AP35326 72 aa-0.32□□□□□ -2.46
RFC1-214ENST00000512726 ATXN8Q156A1 80 aa-0.32□□□□□ -2.46
RFC1-214ENST00000512726 KRTAP6-2Q3LI66 62 aa-0.32□□□□□ -2.46
RFC1-214ENST00000512726 NBPF19A0A087WUL8 3843 aa-0.33□□□□□ -2.46
RFC1-214ENST00000512726 MUC12Q9UKN1 5478 aa-0.33□□□□□ -2.46
RFC1-214ENST00000512726 KRTAP19-7Q3SYF9 63 aa-0.33□□□□□ -2.46
RFC1-214ENST00000512726 SONP18583 2426 aaKnown RBP-0.33□□□□□ -2.46
RFC1-214ENST00000512726 DIP2AQ14689 1571 aa-0.33□□□□□ -2.46
RFC1-214ENST00000512726 MXRA5Q9NR99 2828 aa-0.33□□□□□ -2.46
RFC1-214ENST00000512726 DEFB130BP0DP73 79 aa-0.34□□□□□ -2.46
RFC1-214ENST00000512726 DEFB130AP0DP74 79 aa-0.34□□□□□ -2.46
RFC1-214ENST00000512726 AKAP9Q99996 3911 aa-0.35□□□□□ -2.47
RFC1-214ENST00000512726 HILPDAQ9Y5L2 63 aa-0.35□□□□□ -2.47
RFC1-214ENST00000512726 NHSQ6T4R5 1651 aa-0.35□□□□□ -2.47
RFC1-214ENST00000512726 LAMA5O15230 3695 aa-0.36□□□□□ -2.47
RFC1-214ENST00000512726 CUBNO60494 3623 aa-0.37□□□□□ -2.47
RFC1-214ENST00000512726 HTTP42858 3142 aa-0.38□□□□□ -2.47
RFC1-214ENST00000512726 DNAH6Q9C0G6 4158 aa-0.38□□□□□ -2.47
RFC1-214ENST00000512726 BPTFQ12830 3046 aa-0.38□□□□□ -2.47
RFC1-214ENST00000512726 HIVEP1P15822 2718 aa-0.38□□□□□ -2.47
RFC1-214ENST00000512726 DMXL1Q9Y485 3027 aa-0.39□□□□□ -2.47
RFC1-214ENST00000512726 FASNP49327 2511 aaKnown RBP-0.39□□□□□ -2.47
RFC1-214ENST00000512726 VPS13BQ7Z7G8 4022 aa-0.39□□□□□ -2.47
RFC1-214ENST00000512726 SPRR2EP22531 72 aa-0.39□□□□□ -2.47
RFC1-214ENST00000512726 CRIP1P50238 77 aa-0.39□□□□□ -2.47
RFC1-214ENST00000512726 TACC2O95359 2948 aa-0.39□□□□□ -2.47
RFC1-214ENST00000512726 ABCA9Q8IUA7 1624 aa-0.39□□□□□ -2.47
RFC1-214ENST00000512726 INO80Q9ULG1 1556 aaPredicted RBP-0.4□□□□□ -2.47
RFC1-214ENST00000512726 DNAH9Q9NYC9 4486 aa-0.4□□□□□ -2.47
RFC1-214ENST00000512726 ETDCA0A1B0GVM5 59 aa-0.4□□□□□ -2.47
RFC1-214ENST00000512726 GNG13Q9P2W3 67 aa-0.4□□□□□ -2.47
RFC1-214ENST00000512726 KIAA0586Q9BVV6 1533 aa-0.4□□□□□ -2.47
RFC1-214ENST00000512726 CEP290O15078 2479 aa-0.4□□□□□ -2.47
RFC1-214ENST00000512726 TEP1Q99973 2627 aaKnown RBP-0.41□□□□□ -2.47
RFC1-214ENST00000512726 KMT2CQ8NEZ4 4911 aaKnown RBP-0.41□□□□□ -2.47
RFC1-214ENST00000512726 DNAH3Q8TD57 4116 aa-0.41□□□□□ -2.48
RFC1-214ENST00000512726 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.41□□□□□ -2.48
RFC1-214ENST00000512726 ASXL1Q8IXJ9 1541 aa-0.42□□□□□ -2.48
RFC1-214ENST00000512726 LRRK2Q5S007 2527 aa-0.42□□□□□ -2.48
RFC1-214ENST00000512726 GCN1Q92616 2671 aaKnown RBP-0.42□□□□□ -2.48
RFC1-214ENST00000512726 FAT3Q8TDW7 4589 aa-0.43□□□□□ -2.48
RFC1-214ENST00000512726 FAM186AA6NE01 2351 aa-0.43□□□□□ -2.48
RFC1-214ENST00000512726 ANKRD11Q6UB99 2663 aaPredicted RBP-0.43□□□□□ -2.48
RFC1-214ENST00000512726 PCLOQ9Y6V0 5065 aa-0.44□□□□□ -2.48
RFC1-214ENST00000512726 PKD1L2Q7Z442 2459 aa-0.44□□□□□ -2.48
RFC1-214ENST00000512726 MTORP42345 2549 aa-0.44□□□□□ -2.48
RFC1-214ENST00000512726 ACACAQ13085 2346 aa-0.45□□□□□ -2.48
RFC1-214ENST00000512726 KALRNO60229 2985 aa-0.45□□□□□ -2.48
RFC1-214ENST00000512726 HERC1Q15751 4861 aa-0.46□□□□□ -2.48
RFC1-214ENST00000512726 PKHD1L1Q86WI1 4243 aa-0.46□□□□□ -2.48
RFC1-214ENST00000512726 VPS13DQ5THJ4 4388 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms