RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 LINC00208Q96KT6 92 aa7.73□□□□□ -1.17
PRDM16-207ENST00000512462 NBDYA0A0U1RRE5 68 aa7.73□□□□□ -1.17
PRDM16-207ENST00000512462 RETNLBQ9BQ08 111 aa7.73□□□□□ -1.17
PRDM16-207ENST00000512462 IGLV1-50A0A075B6I6 118 aa7.71□□□□□ -1.18
PRDM16-207ENST00000512462 IGHV6-1A0A0B4J1U7 121 aa7.7□□□□□ -1.18
PRDM16-207ENST00000512462 PSPHP1O15172 72 aa7.7□□□□□ -1.18
PRDM16-207ENST00000512462 TMEM254Q8TBM7 123 aa7.7□□□□□ -1.18
PRDM16-207ENST00000512462 C1orf134Q5TEV5 83 aa7.69□□□□□ -1.18
PRDM16-207ENST00000512462 KCNQ1DNQ9H478 68 aa7.69□□□□□ -1.18
PRDM16-207ENST00000512462 KRTAP1-5Q9BYS1 174 aa7.68□□□□□ -1.18
PRDM16-207ENST00000512462 C16orf90A8MZG2 172 aa7.68□□□□□ -1.18
PRDM16-207ENST00000512462 PCOTHQ58A44 107 aa7.68□□□□□ -1.18
PRDM16-207ENST00000512462 LOC110117498A0A087WWA1 95 aa7.67□□□□□ -1.18
PRDM16-207ENST00000512462 KLKP1Q107X0 134 aa7.67□□□□□ -1.18
PRDM16-207ENST00000512462 MOBPQ13875 183 aa7.67□□□□□ -1.18
PRDM16-207ENST00000512462 PRR15Q8IV56 129 aa7.67□□□□□ -1.18
PRDM16-207ENST00000512462 Q8NBF4 154 aa7.67□□□□□ -1.18
PRDM16-207ENST00000512462 K7EQZ3 153 aa7.66□□□□□ -1.18
PRDM16-207ENST00000512462 RBM12B-AS1Q9P1G2 102 aa7.66□□□□□ -1.18
PRDM16-207ENST00000512462 CXCL6P80162 114 aa7.65□□□□□ -1.19
PRDM16-207ENST00000512462 SPTSSBQ8NFR3 76 aa7.64□□□□□ -1.19
PRDM16-207ENST00000512462 RTL8CO15255 209 aa7.64□□□□□ -1.19
PRDM16-207ENST00000512462 CASC2Q6XLA1 102 aa7.64□□□□□ -1.19
PRDM16-207ENST00000512462 TRBV7-4A0A0J9YYF1 115 aa7.64□□□□□ -1.19
PRDM16-207ENST00000512462 A0A1W2PNM2 257 aa7.63□□□□□ -1.19
PRDM16-207ENST00000512462 H3BS24 57 aa7.63□□□□□ -1.19
PRDM16-207ENST00000512462 OBSCN-AS1Q96MR7 158 aa7.62□□□□□ -1.19
PRDM16-207ENST00000512462 IGFL1Q6UW32 110 aa7.62□□□□□ -1.19
PRDM16-207ENST00000512462 HCG22E2RYF7 251 aa7.61□□□□□ -1.19
PRDM16-207ENST00000512462 NDUFC1O43677 76 aa7.61□□□□□ -1.19
PRDM16-207ENST00000512462 ATP5EP56381 51 aaPredicted RBP7.61□□□□□ -1.19
PRDM16-207ENST00000512462 KRTAP26-1Q6PEX3 210 aa7.61□□□□□ -1.19
PRDM16-207ENST00000512462 APLNQ9ULZ1 77 aa7.6□□□□□ -1.19
PRDM16-207ENST00000512462 A8MU10 97 aa7.59□□□□□ -1.19
PRDM16-207ENST00000512462 C9orf163Q8N9P6 203 aa7.56□□□□□ -1.2
PRDM16-207ENST00000512462 H0Y9P7 68 aa7.56□□□□□ -1.2
PRDM16-207ENST00000512462 SRRM2Q9UQ35 2752 aaKnown RBP7.56□□□□□ -1.2
PRDM16-207ENST00000512462 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.55□□□□□ -1.2
PRDM16-207ENST00000512462 ZNF706Q9Y5V0 76 aaPredicted RBP7.54□□□□□ -1.2
PRDM16-207ENST00000512462 A0A087WTM6 91 aa7.54□□□□□ -1.2
PRDM16-207ENST00000512462 CSMD3Q7Z407 3707 aa7.53□□□□□ -1.2
PRDM16-207ENST00000512462 DMBT1Q9UGM3 2413 aaPredicted RBP7.53□□□□□ -1.2
PRDM16-207ENST00000512462 CHKB-CPT1BH3BT56 60 aa7.53□□□□□ -1.2
PRDM16-207ENST00000512462 TLX1NBP0CAT3 122 aa7.53□□□□□ -1.2
PRDM16-207ENST00000512462 KTN1-AS1Q86SY8 53 aa7.53□□□□□ -1.2
PRDM16-207ENST00000512462 SPACA4Q8TDM5 124 aa7.53□□□□□ -1.2
PRDM16-207ENST00000512462 BCE1O60756 84 aa7.52□□□□□ -1.21
PRDM16-207ENST00000512462 CMYA5Q8N3K9 4069 aa7.51□□□□□ -1.21
PRDM16-207ENST00000512462 A8MUN3 132 aa7.51□□□□□ -1.21
PRDM16-207ENST00000512462 PANO1I0J062 215 aa7.5□□□□□ -1.21
PRDM16-207ENST00000512462 PSORS1C2Q9UIG4 136 aa7.5□□□□□ -1.21
PRDM16-207ENST00000512462 C1orf64Q8NEQ6 169 aa7.5□□□□□ -1.21
PRDM16-207ENST00000512462 SMR3BP02814 79 aaPredicted RBP7.49□□□□□ -1.21
PRDM16-207ENST00000512462 ANK2Q01484 3957 aa7.49□□□□□ -1.21
PRDM16-207ENST00000512462 TRAV22A0A0B4J277 110 aa7.49□□□□□ -1.21
PRDM16-207ENST00000512462 TNP2Q05952 138 aa7.49□□□□□ -1.21
PRDM16-207ENST00000512462 hDV103S1A0JD37 113 aa7.48□□□□□ -1.21
PRDM16-207ENST00000512462 FLG2Q5D862 2391 aaPredicted RBP7.46□□□□□ -1.21
PRDM16-207ENST00000512462 IGLV5-48A0A075B6I7 105 aa7.46□□□□□ -1.22
PRDM16-207ENST00000512462 CNBPP62633 177 aaKnown RBP7.45□□□□□ -1.22
PRDM16-207ENST00000512462 PLA2G2DQ9UNK4 145 aa7.44□□□□□ -1.22
PRDM16-207ENST00000512462 C8orf87E5RJ46 101 aa7.44□□□□□ -1.22
PRDM16-207ENST00000512462 DNAH3Q8TD57 4116 aa7.44□□□□□ -1.22
PRDM16-207ENST00000512462 COL7A1Q02388 2944 aa7.43□□□□□ -1.22
PRDM16-207ENST00000512462 DSCR10P59022 87 aa7.43□□□□□ -1.22
PRDM16-207ENST00000512462 KRTAP11-1Q8IUC1 163 aa7.43□□□□□ -1.22
PRDM16-207ENST00000512462 SPINK1P00995 79 aa7.42□□□□□ -1.22
PRDM16-207ENST00000512462 IGKV2D-30A0A075B6S6 120 aa7.42□□□□□ -1.22
PRDM16-207ENST00000512462 IGKV2-30P06310 120 aa7.42□□□□□ -1.22
PRDM16-207ENST00000512462 Q1T7F1 81 aa7.42□□□□□ -1.22
PRDM16-207ENST00000512462 KRTAP7-1Q8IUC3 87 aa7.41□□□□□ -1.22
PRDM16-207ENST00000512462 PRR15LQ9BU68 103 aa7.39□□□□□ -1.23
PRDM16-207ENST00000512462 WWC2-AS2Q96NR7 200 aa7.39□□□□□ -1.23
PRDM16-207ENST00000512462 FBN3Q75N90 2809 aa7.39□□□□□ -1.23
PRDM16-207ENST00000512462 ZNF861PO60384 105 aa7.39□□□□□ -1.23
PRDM16-207ENST00000512462 A8MWP4 228 aa7.38□□□□□ -1.23
PRDM16-207ENST00000512462 IGLV5-37A0A075B6J1 123 aa7.38□□□□□ -1.23
PRDM16-207ENST00000512462 A6NED7 52 aa7.38□□□□□ -1.23
PRDM16-207ENST00000512462 SPRR1AP35321 89 aa7.38□□□□□ -1.23
PRDM16-207ENST00000512462 SPRR4Q96PI1 79 aa7.37□□□□□ -1.23
PRDM16-207ENST00000512462 PLA2G1BP04054 148 aaKnown RBP7.35□□□□□ -1.23
PRDM16-207ENST00000512462 OCR1Q9BZK8 76 aa7.35□□□□□ -1.23
PRDM16-207ENST00000512462 SPAG11AQ6PDA7 123 aa7.34□□□□□ -1.23
PRDM16-207ENST00000512462 KRTAP4-16G5E9R7 235 aaPredicted RBP7.33□□□□□ -1.24
PRDM16-207ENST00000512462 Q5VV11 94 aa7.33□□□□□ -1.24
PRDM16-207ENST00000512462 TYMSOSQ8TAI1 123 aa7.32□□□□□ -1.24
PRDM16-207ENST00000512462 IGLV7-43P04211 117 aa7.31□□□□□ -1.24
PRDM16-207ENST00000512462 A0A1B0GW54 56 aa7.31□□□□□ -1.24
PRDM16-207ENST00000512462 C8orf17Q9NRJ1 99 aa7.31□□□□□ -1.24
PRDM16-207ENST00000512462 KRTAP10-2P60368 255 aa7.3□□□□□ -1.24
PRDM16-207ENST00000512462 C7orf65Q6ZTY9 151 aa7.29□□□□□ -1.24
PRDM16-207ENST00000512462 PRR26Q8N8Z3 221 aa7.29□□□□□ -1.24
PRDM16-207ENST00000512462 ATP11AUNQ6ZP68 121 aa7.28□□□□□ -1.24
PRDM16-207ENST00000512462 LCA10Q71F78 164 aa7.28□□□□□ -1.24
PRDM16-207ENST00000512462 HUWE1Q7Z6Z7 4374 aaKnown RBP7.28□□□□□ -1.24
PRDM16-207ENST00000512462 MRPL34Q9BQ48 92 aaKnown RBP7.27□□□□□ -1.25
PRDM16-207ENST00000512462 LINC00313P59037 77 aa7.27□□□□□ -1.25
PRDM16-207ENST00000512462 PRAC1Q96KF2 57 aa7.27□□□□□ -1.25
PRDM16-207ENST00000512462 IGLV8-61A0A075B6I0 122 aa7.26□□□□□ -1.25
PRDM16-207ENST00000512462 A0A1B0GVX0 72 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms