RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	BCE1	O60756	84 aa		4.62	□□□□□ -1.67
NR1I3-231	ENST00000512340	RBM12B-AS1	Q9P1G2	102 aa		4.62	□□□□□ -1.67
NR1I3-231	ENST00000512340	VPS13B	Q7Z7G8	4022 aa		4.62	□□□□□ -1.67
NR1I3-231	ENST00000512340	FAT1	Q14517	4588 aa		4.62	□□□□□ -1.67
NR1I3-231	ENST00000512340	UBR4	Q5T4S7	5183 aa		4.61	□□□□□ -1.67
NR1I3-231	ENST00000512340		A0A0B4J2C4	111 aa		4.61	□□□□□ -1.67
NR1I3-231	ENST00000512340		A0A0J9YXY3	114 aa		4.61	□□□□□ -1.67
NR1I3-231	ENST00000512340	RPL37AP8	A6NKH3	93 aa		4.61	□□□□□ -1.67
NR1I3-231	ENST00000512340	NDUFS5	O43920	106 aa		4.61	□□□□□ -1.67
NR1I3-231	ENST00000512340	TSPEAR-AS2	P59090	65 aa		4.61	□□□□□ -1.67
NR1I3-231	ENST00000512340	KRTAP10-4	P60372	401 aa	Predicted RBP	4.61	□□□□□ -1.67
NR1I3-231	ENST00000512340	S100A7L2	Q5SY68	101 aa		4.61	□□□□□ -1.67
NR1I3-231	ENST00000512340	KTN1-AS1	Q86SY8	53 aa		4.61	□□□□□ -1.67
NR1I3-231	ENST00000512340	IGLV1-50	A0A075B6I6	118 aa		4.6	□□□□□ -1.67
NR1I3-231	ENST00000512340	IGKV2-28	A0A075B6P5	120 aa		4.6	□□□□□ -1.67
NR1I3-231	ENST00000512340	ZNF861P	O60384	105 aa		4.6	□□□□□ -1.67
NR1I3-231	ENST00000512340	IGKV2D-28	P01615	120 aa		4.6	□□□□□ -1.67
NR1I3-231	ENST00000512340	PRR26	Q8N8Z3	221 aa		4.6	□□□□□ -1.67
NR1I3-231	ENST00000512340	TEX49	A0A1B0GTD5	131 aa		4.59	□□□□□ -1.67
NR1I3-231	ENST00000512340	ETDC	A0A1B0GVM5	59 aa		4.59	□□□□□ -1.67
NR1I3-231	ENST00000512340	NDUFC1	O43677	76 aa		4.59	□□□□□ -1.67
NR1I3-231	ENST00000512340	KRTAP7-1	Q8IUC3	87 aa		4.59	□□□□□ -1.67
NR1I3-231	ENST00000512340	CYSTM1	Q9H1C7	97 aa		4.59	□□□□□ -1.67
NR1I3-231	ENST00000512340		H0Y9J4	135 aa		4.58	□□□□□ -1.68
NR1I3-231	ENST00000512340	PRY	O14603	147 aa		4.58	□□□□□ -1.68
NR1I3-231	ENST00000512340	NCR3	O14931	201 aa		4.58	□□□□□ -1.68
NR1I3-231	ENST00000512340	DAND5	Q8N907	189 aa		4.58	□□□□□ -1.68
NR1I3-231	ENST00000512340	PRO1854	Q9UHT4	67 aa		4.58	□□□□□ -1.68
NR1I3-231	ENST00000512340	DNAH8	Q96JB1	4490 aa		4.58	□□□□□ -1.68
NR1I3-231	ENST00000512340	C8orf87	E5RJ46	101 aa		4.57	□□□□□ -1.68
NR1I3-231	ENST00000512340	LINC00308	Q8TCZ7	52 aa		4.57	□□□□□ -1.68
NR1I3-231	ENST00000512340	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.57	□□□□□ -1.68
NR1I3-231	ENST00000512340	CCK	P06307	115 aa		4.56	□□□□□ -1.68
NR1I3-231	ENST00000512340		Q6JHZ5	121 aa		4.56	□□□□□ -1.68
NR1I3-231	ENST00000512340	KCNQ1DN	Q9H478	68 aa		4.56	□□□□□ -1.68
NR1I3-231	ENST00000512340	HMCN2	Q8NDA2	5059 aa		4.56	□□□□□ -1.68
NR1I3-231	ENST00000512340	TRBV10-3	A0A0K0K1G6	114 aa		4.55	□□□□□ -1.68
NR1I3-231	ENST00000512340	ADAMTSL4-AS1	Q5T5F5	129 aa		4.55	□□□□□ -1.68
NR1I3-231	ENST00000512340	LINC00337	Q8N6G1	96 aa		4.55	□□□□□ -1.68
NR1I3-231	ENST00000512340	TRAV23DV6	A0A075B6W5	121 aa		4.54	□□□□□ -1.68
NR1I3-231	ENST00000512340		H7BZZ5	65 aa		4.54	□□□□□ -1.68
NR1I3-231	ENST00000512340	CFC1B	P0CG36	223 aa		4.54	□□□□□ -1.68
NR1I3-231	ENST00000512340	CFC1	P0CG37	223 aa		4.54	□□□□□ -1.68
NR1I3-231	ENST00000512340	KLKP1	Q107X0	134 aa		4.54	□□□□□ -1.68
NR1I3-231	ENST00000512340	KRTAP11-1	Q8IUC1	163 aa		4.54	□□□□□ -1.68
NR1I3-231	ENST00000512340	HIGD2A	Q9BW72	106 aa		4.54	□□□□□ -1.68
NR1I3-231	ENST00000512340	TTTY13	Q9BZ97	58 aa		4.54	□□□□□ -1.68
NR1I3-231	ENST00000512340	TRAV13-2	A0A0B4J235	113 aa		4.53	□□□□□ -1.68
NR1I3-231	ENST00000512340	IGLV6-57	P01721	117 aa		4.53	□□□□□ -1.68
NR1I3-231	ENST00000512340	LITAF	Q99732	161 aa		4.53	□□□□□ -1.68
NR1I3-231	ENST00000512340	ZNF73	O43830	326 aa	Predicted RBP	4.52	□□□□□ -1.69
NR1I3-231	ENST00000512340	COX6C	P09669	75 aa		4.52	□□□□□ -1.69
NR1I3-231	ENST00000512340	PRLH	P81277	87 aa		4.52	□□□□□ -1.69
NR1I3-231	ENST00000512340	FAM229B	Q4G0N7	80 aa		4.52	□□□□□ -1.69
NR1I3-231	ENST00000512340	SMCR5	Q8TEV8	140 aa		4.52	□□□□□ -1.69
NR1I3-231	ENST00000512340	SPRR1A	P35321	89 aa		4.51	□□□□□ -1.69
NR1I3-231	ENST00000512340	RBM3	P98179	157 aa	Known RBP	4.51	□□□□□ -1.69
NR1I3-231	ENST00000512340	ATP5EP2	Q5VTU8	51 aa		4.51	□□□□□ -1.69
NR1I3-231	ENST00000512340	SOSTDC1	Q6X4U4	206 aa		4.51	□□□□□ -1.69
NR1I3-231	ENST00000512340		Q6ZVQ6	151 aa		4.51	□□□□□ -1.69
NR1I3-231	ENST00000512340	MUSTN1	Q8IVN3	82 aa		4.51	□□□□□ -1.69
NR1I3-231	ENST00000512340		Q8NDZ9	215 aa		4.51	□□□□□ -1.69
NR1I3-231	ENST00000512340	DHRS4-AS1	Q9P1J3	65 aa		4.51	□□□□□ -1.69
NR1I3-231	ENST00000512340		Q6ZRX8	168 aa		4.5	□□□□□ -1.69
NR1I3-231	ENST00000512340	LCA10	Q71F78	164 aa		4.5	□□□□□ -1.69
NR1I3-231	ENST00000512340	KRTAP13-1	Q8IUC0	172 aa		4.5	□□□□□ -1.69
NR1I3-231	ENST00000512340	TRAV7	A0A075B6U4	112 aa		4.49	□□□□□ -1.69
NR1I3-231	ENST00000512340	LST1	O00453	97 aa		4.49	□□□□□ -1.69
NR1I3-231	ENST00000512340	LCE2B	O14633	110 aa		4.49	□□□□□ -1.69
NR1I3-231	ENST00000512340	TYMSOS	Q8TAI1	123 aa		4.49	□□□□□ -1.69
NR1I3-231	ENST00000512340	COX7B	P24311	80 aa		4.48	□□□□□ -1.69
NR1I3-231	ENST00000512340	KRTAP10-8	P60410	259 aa		4.48	□□□□□ -1.69
NR1I3-231	ENST00000512340		Q1T7F1	81 aa		4.48	□□□□□ -1.69
NR1I3-231	ENST00000512340	TMEM256-PLSCR3	K7ERE1	68 aa		4.47	□□□□□ -1.69
NR1I3-231	ENST00000512340	EIF4EBP3	O60516	100 aa	Predicted RBP	4.47	□□□□□ -1.69
NR1I3-231	ENST00000512340	GHRH	P01286	108 aa		4.47	□□□□□ -1.69
NR1I3-231	ENST00000512340	C20orf197	Q8N268	126 aa		4.47	□□□□□ -1.69
NR1I3-231	ENST00000512340	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.46	□□□□□ -1.7
NR1I3-231	ENST00000512340	KRTAP1-4	P0C5Y4	121 aa		4.46	□□□□□ -1.7
NR1I3-231	ENST00000512340	MT1HL1	P0DM35	61 aa		4.46	□□□□□ -1.7
NR1I3-231	ENST00000512340	C6orf99	Q4VX62	202 aa		4.46	□□□□□ -1.7
NR1I3-231	ENST00000512340	SPRR4	Q96PI1	79 aa		4.46	□□□□□ -1.7
NR1I3-231	ENST00000512340	ELOF1	P60002	83 aa	Known RBP	4.45	□□□□□ -1.7
NR1I3-231	ENST00000512340	SPAG11A	Q6PDA7	123 aa		4.45	□□□□□ -1.7
NR1I3-231	ENST00000512340	LRP1	Q07954	4544 aa	Known RBP	4.44	□□□□□ -1.7
NR1I3-231	ENST00000512340		A8MUN3	132 aa		4.44	□□□□□ -1.7
NR1I3-231	ENST00000512340	CXCL6	P80162	114 aa		4.44	□□□□□ -1.7
NR1I3-231	ENST00000512340		Q1RN00	199 aa		4.44	□□□□□ -1.7
NR1I3-231	ENST00000512340	TRIAP1	O43715	76 aa		4.43	□□□□□ -1.7
NR1I3-231	ENST00000512340	ATP11AUN	Q6ZP68	121 aa		4.43	□□□□□ -1.7
NR1I3-231	ENST00000512340	C7orf65	Q6ZTY9	151 aa		4.43	□□□□□ -1.7
NR1I3-231	ENST00000512340	SSBP3-AS1	Q7Z2R9	100 aa		4.43	□□□□□ -1.7
NR1I3-231	ENST00000512340	LINC00304	Q8N9R0	145 aa		4.43	□□□□□ -1.7
NR1I3-231	ENST00000512340	SMIM11B	Q8TCY0	68 aa		4.43	□□□□□ -1.7
NR1I3-231	ENST00000512340		A0A087X002	238 aa		4.42	□□□□□ -1.7
NR1I3-231	ENST00000512340		F8WEM9	126 aa		4.42	□□□□□ -1.7
NR1I3-231	ENST00000512340	ERC2-IT1	O76042	136 aa		4.42	□□□□□ -1.7
NR1I3-231	ENST00000512340	LINC00483	Q53H64	154 aa		4.42	□□□□□ -1.7
NR1I3-231	ENST00000512340		Q9BRP9	147 aa		4.42	□□□□□ -1.7
NR1I3-231	ENST00000512340	ANAPC11	Q9NYG5	84 aa		4.42	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms